RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 FAM159AQ6UWV7 190 aa10.66□□□□□ -0.7
VSTM4-202ENST00000332853 C18orf15Q96N68 181 aa10.66□□□□□ -0.7
VSTM4-202ENST00000332853 CXCL1P09341 107 aa10.65□□□□□ -0.7
VSTM4-202ENST00000332853 RNASE4P34096 147 aaKnown RBP10.65□□□□□ -0.7
VSTM4-202ENST00000332853 ZNF56Q15929 161 aa10.65□□□□□ -0.7
VSTM4-202ENST00000332853 PRSS8Q16651 343 aa10.65□□□□□ -0.7
VSTM4-202ENST00000332853 SRD5A1P18405 259 aa10.65□□□□□ -0.7
VSTM4-202ENST00000332853 BRD3OSQ6XYD6 125 aa10.65□□□□□ -0.7
VSTM4-202ENST00000332853 OTORQ9NRC9 128 aa10.65□□□□□ -0.7
VSTM4-202ENST00000332853 K7ENP7 123 aa10.65□□□□□ -0.7
VSTM4-202ENST00000332853 DDTP30046 118 aa10.65□□□□□ -0.7
VSTM4-202ENST00000332853 TPTE2P1Q5T6R2 138 aa10.65□□□□□ -0.7
VSTM4-202ENST00000332853 C7orf71A4D174 169 aa10.65□□□□□ -0.7
VSTM4-202ENST00000332853 M0QZK8 103 aa10.65□□□□□ -0.7
VSTM4-202ENST00000332853 OR10AG1Q8NH19 301 aa10.65□□□□□ -0.7
VSTM4-202ENST00000332853 TBL2Q9Y4P3 447 aaKnown RBP10.65□□□□□ -0.7
VSTM4-202ENST00000332853 LYL1P12980 280 aa10.65□□□□□ -0.71
VSTM4-202ENST00000332853 C15orf62A8K5M9 175 aa10.64□□□□□ -0.71
VSTM4-202ENST00000332853 ST6GALNAC3Q8NDV1 305 aa10.64□□□□□ -0.71
VSTM4-202ENST00000332853 WFDC12Q8WWY7 111 aa10.64□□□□□ -0.71
VSTM4-202ENST00000332853 F11RQ9Y624 299 aaKnown RBP10.64□□□□□ -0.71
VSTM4-202ENST00000332853 IZUMO1RA6ND01 250 aa10.64□□□□□ -0.71
VSTM4-202ENST00000332853 BUB1B-PAK6H3BSN5 160 aa10.64□□□□□ -0.71
VSTM4-202ENST00000332853 GTF2H5Q6ZYL4 71 aa10.64□□□□□ -0.71
VSTM4-202ENST00000332853 RRN3P1Q2M238 152 aa10.64□□□□□ -0.71
VSTM4-202ENST00000332853 OR1N2Q8NGR9 330 aa10.64□□□□□ -0.71
VSTM4-202ENST00000332853 ATG101Q9BSB4 218 aa10.64□□□□□ -0.71
VSTM4-202ENST00000332853 FAM209BQ5JX69 171 aa10.64□□□□□ -0.71
VSTM4-202ENST00000332853 MSRB2Q9Y3D2 182 aa10.64□□□□□ -0.71
VSTM4-202ENST00000332853 TAS2R60P59551 318 aa10.64□□□□□ -0.71
VSTM4-202ENST00000332853 TNFRSF14Q92956 283 aa10.64□□□□□ -0.71
VSTM4-202ENST00000332853 RAX2Q96IS3 184 aa10.64□□□□□ -0.71
VSTM4-202ENST00000332853 SCRT1Q9BWW7 348 aa10.64□□□□□ -0.71
VSTM4-202ENST00000332853 MBNL3Q9NUK0 354 aaKnown RBP10.64□□□□□ -0.71
VSTM4-202ENST00000332853 ZNF257Q9Y2Q1 563 aa10.64□□□□□ -0.71
VSTM4-202ENST00000332853 A0A0G2JLM5 398 aa10.63□□□□□ -0.71
VSTM4-202ENST00000332853 APOHP02749 345 aaPredicted RBP10.63□□□□□ -0.71
VSTM4-202ENST00000332853 GLRX5Q86SX6 157 aa10.63□□□□□ -0.71
VSTM4-202ENST00000332853 LOC102724200A0A096LPH7 203 aaPredicted RBP10.63□□□□□ -0.71
VSTM4-202ENST00000332853 A0A1B0GUT8 65 aa10.63□□□□□ -0.71
VSTM4-202ENST00000332853 EFNA4P52798 201 aa10.63□□□□□ -0.71
VSTM4-202ENST00000332853 PMCHL1Q16048 86 aa10.63□□□□□ -0.71
VSTM4-202ENST00000332853 TUBA4BQ9H853 241 aa10.63□□□□□ -0.71
VSTM4-202ENST00000332853 K7EM74 188 aa10.63□□□□□ -0.71
VSTM4-202ENST00000332853 RPL15P61313 204 aaKnown RBP10.63□□□□□ -0.71
VSTM4-202ENST00000332853 PVRIGQ6DKI7 326 aa10.63□□□□□ -0.71
VSTM4-202ENST00000332853 TMEM136Q6ZRR5 245 aa10.63□□□□□ -0.71
VSTM4-202ENST00000332853 EXOC3-AS1Q8N2X6 119 aa10.63□□□□□ -0.71
VSTM4-202ENST00000332853 PRELID3AQ96N28 172 aa10.63□□□□□ -0.71
VSTM4-202ENST00000332853 M0R3E3 92 aa10.63□□□□□ -0.71
VSTM4-202ENST00000332853 PSG1P11464 419 aa10.63□□□□□ -0.71
VSTM4-202ENST00000332853 PPIFP30405 207 aaKnown RBP10.63□□□□□ -0.71
VSTM4-202ENST00000332853 PRSS33Q8NF86 280 aa10.63□□□□□ -0.71
VSTM4-202ENST00000332853 C8orf46Q8TAG6 207 aa10.63□□□□□ -0.71
VSTM4-202ENST00000332853 STAG3L2P0CL84 134 aa10.63□□□□□ -0.71
VSTM4-202ENST00000332853 STAG3L3P0CL85 134 aa10.63□□□□□ -0.71
VSTM4-202ENST00000332853 CYYR1Q96J86 154 aa10.63□□□□□ -0.71
VSTM4-202ENST00000332853 ANAPC10Q9UM13 185 aa10.63□□□□□ -0.71
VSTM4-202ENST00000332853 DIDO1Q9BTC0 2240 aaKnown RBP10.63□□□□□ -0.71
VSTM4-202ENST00000332853 DENND4AQ7Z401 1863 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 C5orf52A6NGY3 159 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 RPL13AP40429 203 aaKnown RBP10.62□□□□□ -0.71
VSTM4-202ENST00000332853 HOXA5P20719 270 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 FAM71F2Q6NXP2 309 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 FAM169BQ8N8A8 192 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 C11orf44Q8N8P7 122 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 GZMBP10144 247 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 PIP4P1Q86T03 277 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 KCNS1Q96KK3 526 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 CACNA1GO43497 2377 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 A6NDN8 102 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 PMS2P5A8MQ11 134 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 SERF1AO75920 110 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 ADCYAP1P18509 176 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 ITLN2Q8WWU7 325 aaPredicted RBP10.62□□□□□ -0.71
VSTM4-202ENST00000332853 A0A1W2PRE2 83 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 J3QR89 54 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 HIST1H2BKO60814 126 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 HIST1H2BJP06899 126 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 HIST1H2BOP23527 126 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 HIST1H2BBP33778 126 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 HIST1H2BDP58876 126 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 HIST1H2BCP62807 126 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 HIST2H2BEQ16778 126 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.62□□□□□ -0.71
VSTM4-202ENST00000332853 HIST1H2BHQ93079 126 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 RNF166Q96A37 237 aaPredicted RBP10.62□□□□□ -0.71
VSTM4-202ENST00000332853 HIST1H2BNQ99877 126 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 HIST1H2BMQ99879 126 aa10.62□□□□□ -0.71
VSTM4-202ENST00000332853 ST6GALNAC6Q969X2 333 aa10.61□□□□□ -0.71
VSTM4-202ENST00000332853 AGMATQ9BSE5 352 aa10.61□□□□□ -0.71
VSTM4-202ENST00000332853 FAM215AQ9Y5M1 114 aa10.61□□□□□ -0.71
VSTM4-202ENST00000332853 COLCA2A8K830 154 aa10.61□□□□□ -0.71
VSTM4-202ENST00000332853 FER1L6-AS1Q8NA97 138 aa10.61□□□□□ -0.71
VSTM4-202ENST00000332853 DKK1O94907 266 aa10.61□□□□□ -0.71
VSTM4-202ENST00000332853 CNTFRP26992 372 aa10.61□□□□□ -0.71
VSTM4-202ENST00000332853 TEX38Q6PEX7 206 aa10.61□□□□□ -0.71
VSTM4-202ENST00000332853 DMRT1Q9Y5R6 373 aa10.61□□□□□ -0.71
VSTM4-202ENST00000332853 PKDREJQ9NTG1 2253 aa10.61□□□□□ -0.71
VSTM4-202ENST00000332853 CRXO43186 299 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms