RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 MESP1Q9BRJ9 268 aa8.82□□□□□ -1
CLN8-201ENST00000331222 LAMTOR3Q9UHA4 124 aa8.82□□□□□ -1
CLN8-201ENST00000331222 ARHGAP21Q5T5U3 1957 aa8.82□□□□□ -1
CLN8-201ENST00000331222 FCN3O75636 299 aa8.82□□□□□ -1
CLN8-201ENST00000331222 PAX1P15863 534 aa8.82□□□□□ -1
CLN8-201ENST00000331222 C2orf68Q2NKX9 166 aa8.82□□□□□ -1
CLN8-201ENST00000331222 SLC25A2Q9BXI2 301 aa8.82□□□□□ -1
CLN8-201ENST00000331222 NHP2Q9NX24 153 aaKnown RBP8.82□□□□□ -1
CLN8-201ENST00000331222 FOXD3Q9UJU5 478 aaPredicted RBP8.82□□□□□ -1
CLN8-201ENST00000331222 SPTAN1Q13813 2472 aaKnown RBP8.82□□□□□ -1
CLN8-201ENST00000331222 TM4SF5O14894 197 aa8.82□□□□□ -1
CLN8-201ENST00000331222 DEFB130BP0DP73 79 aa8.82□□□□□ -1
CLN8-201ENST00000331222 DEFB130AP0DP74 79 aa8.82□□□□□ -1
CLN8-201ENST00000331222 DTX2Q86UW9 622 aa8.82□□□□□ -1
CLN8-201ENST00000331222 OR2K2Q8NGT1 345 aa8.82□□□□□ -1
CLN8-201ENST00000331222 WDR81Q562E7 1941 aa8.82□□□□□ -1
CLN8-201ENST00000331222 THSD7AQ9UPZ6 1657 aa8.82□□□□□ -1
CLN8-201ENST00000331222 PINLYPA6NC86 204 aa8.81□□□□□ -1
CLN8-201ENST00000331222 PAX4O43316 350 aa8.81□□□□□ -1
CLN8-201ENST00000331222 PRADC1Q9BSG0 188 aa8.81□□□□□ -1
CLN8-201ENST00000331222 MYOD1P15172 320 aa8.81□□□□□ -1
CLN8-201ENST00000331222 ORMDL3Q8N138 153 aa8.81□□□□□ -1
CLN8-201ENST00000331222 IL36BQ9NZH7 164 aa8.81□□□□□ -1
CLN8-201ENST00000331222 COL24A1Q17RW2 1714 aa8.81□□□□□ -1
CLN8-201ENST00000331222 CLPSP04118 112 aa8.81□□□□□ -1
CLN8-201ENST00000331222 CD300EQ496F6 205 aaPredicted RBP8.81□□□□□ -1
CLN8-201ENST00000331222 SLC25A39Q9BZJ4 359 aaPredicted RBP8.81□□□□□ -1
CLN8-201ENST00000331222 CHTOPQ9Y3Y2 248 aaKnown RBP8.81□□□□□ -1
CLN8-201ENST00000331222 TRAV5A0A0B4J249 113 aa8.81□□□□□ -1
CLN8-201ENST00000331222 PGPEP1LA6NFU8 196 aa8.81□□□□□ -1
CLN8-201ENST00000331222 WNT2P09544 360 aa8.81□□□□□ -1
CLN8-201ENST00000331222 GPX4P36969 197 aaPredicted RBP8.81□□□□□ -1
CLN8-201ENST00000331222 FOXL1Q12952 345 aa8.81□□□□□ -1
CLN8-201ENST00000331222 HIST1H2BAQ96A08 127 aa8.81□□□□□ -1
CLN8-201ENST00000331222 NCOR1O75376 2440 aa8.81□□□□□ -1
CLN8-201ENST00000331222 DANCRP0C864 163 aa8.81□□□□□ -1
CLN8-201ENST00000331222 ADMP35318 185 aa8.81□□□□□ -1
CLN8-201ENST00000331222 EXOC3-AS1Q8N2X6 119 aa8.81□□□□□ -1
CLN8-201ENST00000331222 RCC1LQ96I51 464 aaKnown RBP8.81□□□□□ -1
CLN8-201ENST00000331222 GGACTQ9BVM4 153 aa8.81□□□□□ -1
CLN8-201ENST00000331222 HOXB1P14653 301 aaPredicted RBP8.8□□□□□ -1
CLN8-201ENST00000331222 ANXA2RQ3ZCQ2 193 aa8.8□□□□□ -1
CLN8-201ENST00000331222 IL17RELQ6ZVW7 336 aa8.8□□□□□ -1
CLN8-201ENST00000331222 COL4A1P02462 1669 aa8.8□□□□□ -1
CLN8-201ENST00000331222 TRBV5-3A0A0A0MS03 114 aa8.8□□□□□ -1
CLN8-201ENST00000331222 IGHV1-18A0A0C4DH31 117 aa8.8□□□□□ -1
CLN8-201ENST00000331222 NCR2O95944 276 aa8.8□□□□□ -1
CLN8-201ENST00000331222 PRB1P04280 392 aa8.8□□□□□ -1
CLN8-201ENST00000331222 SELLP14151 372 aa8.8□□□□□ -1
CLN8-201ENST00000331222 DDTP30046 118 aa8.8□□□□□ -1
CLN8-201ENST00000331222 PLCE1Q9P212 2302 aa8.8□□□□□ -1
CLN8-201ENST00000331222 IFITM3Q01628 133 aa8.8□□□□□ -1
CLN8-201ENST00000331222 PLPPR1Q8TBJ4 325 aa8.8□□□□□ -1
CLN8-201ENST00000331222 CFHR5Q9BXR6 569 aa8.8□□□□□ -1
CLN8-201ENST00000331222 FAM90A26D6RGX4 464 aa8.79□□□□□ -1
CLN8-201ENST00000331222 POC1AQ8NBT0 407 aa8.79□□□□□ -1
CLN8-201ENST00000331222 MBNL3Q9NUK0 354 aaKnown RBP8.79□□□□□ -1
CLN8-201ENST00000331222 H3BUT2 72 aa8.79□□□□□ -1
CLN8-201ENST00000331222 RIPPLY2Q5TAB7 128 aa8.79□□□□□ -1
CLN8-201ENST00000331222 MEGF9Q9H1U4 602 aa8.79□□□□□ -1
CLN8-201ENST00000331222 RPUSD1Q9UJJ7 312 aaKnown RBP8.79□□□□□ -1
CLN8-201ENST00000331222 TRBV5-7A0A0A0MS05 114 aa8.79□□□□□ -1
CLN8-201ENST00000331222 IGHV3-16A0A0C4DH30 117 aa8.79□□□□□ -1
CLN8-201ENST00000331222 KLF17Q5JT82 389 aaPredicted RBP8.79□□□□□ -1
CLN8-201ENST00000331222 FAM209AQ5JX71 171 aa8.79□□□□□ -1
CLN8-201ENST00000331222 FABP5P3A8MUU1 101 aa8.79□□□□□ -1
CLN8-201ENST00000331222 IGHMP01871 453 aa8.79□□□□□ -1
CLN8-201ENST00000331222 ZNF708P17019 499 aa8.79□□□□□ -1
CLN8-201ENST00000331222 RPL32P62910 135 aaKnown RBP8.79□□□□□ -1
CLN8-201ENST00000331222 GDF15Q99988 308 aa8.79□□□□□ -1
CLN8-201ENST00000331222 DERL1Q9BUN8 251 aa8.79□□□□□ -1
CLN8-201ENST00000331222 H3BUX3 64 aa8.79□□□□□ -1
CLN8-201ENST00000331222 RNF125Q96EQ8 232 aa8.79□□□□□ -1
CLN8-201ENST00000331222 NAA38Q9BRA0 125 aaKnown RBP8.79□□□□□ -1
CLN8-201ENST00000331222 SCRT1Q9BWW7 348 aa8.79□□□□□ -1
CLN8-201ENST00000331222 TMEM133Q9H2Q1 129 aa8.79□□□□□ -1
CLN8-201ENST00000331222 PPP1R3EQ9H7J1 279 aa8.79□□□□□ -1
CLN8-201ENST00000331222 A0A096LPF7 62 aa8.79□□□□□ -1
CLN8-201ENST00000331222 CCL1P22362 96 aa8.79□□□□□ -1
CLN8-201ENST00000331222 GGTLC3B5MD39 225 aa8.78□□□□□ -1
CLN8-201ENST00000331222 LHBP01229 141 aa8.78□□□□□ -1
CLN8-201ENST00000331222 NMBP08949 121 aa8.78□□□□□ -1
CLN8-201ENST00000331222 ZXDCQ2QGD7 858 aaPredicted RBP8.78□□□□□ -1
CLN8-201ENST00000331222 C15orf32Q32M92 178 aa8.78□□□□□ -1
CLN8-201ENST00000331222 FAM166AQ6J272 317 aa8.78□□□□□ -1
CLN8-201ENST00000331222 RNF223E7ERA6 249 aa8.78□□□□□ -1
CLN8-201ENST00000331222 C1QL4Q86Z23 238 aa8.78□□□□□ -1
CLN8-201ENST00000331222 OSR1Q8TAX0 266 aaPredicted RBP8.78□□□□□ -1
CLN8-201ENST00000331222 LINC00312Q9Y6C7 94 aa8.78□□□□□ -1
CLN8-201ENST00000331222 PEF1Q9UBV8 284 aaKnown RBP8.78□□□□□ -1
CLN8-201ENST00000331222 A0A087WV48 116 aa8.78□□□□□ -1
CLN8-201ENST00000331222 MORN2Q502X0 79 aa8.78□□□□□ -1
CLN8-201ENST00000331222 RUSC1-AS1Q66K80 236 aa8.78□□□□□ -1
CLN8-201ENST00000331222 ZNF525Q8N782 197 aa8.78□□□□□ -1
CLN8-201ENST00000331222 DMRT1Q9Y5R6 373 aa8.78□□□□□ -1
CLN8-201ENST00000331222 SCN10AQ9Y5Y9 1956 aa8.78□□□□□ -1
CLN8-201ENST00000331222 TRAV8-4A0A0B4J246 113 aa8.78□□□□□ -1
CLN8-201ENST00000331222 GCM2O75603 506 aaPredicted RBP8.78□□□□□ -1
CLN8-201ENST00000331222 TBX6O95947 436 aaPredicted RBP8.78□□□□□ -1
CLN8-201ENST00000331222 SMIM10L1P0DMW3 83 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms