RNA–Protein interactions for RNA: ENST00000331194.8

CCDC88C-201, Transcript of coiled-coil domain containing 88C, humanhuman

TSL 5 BASIC

Gene CCDC88C, Length 3,104 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88C-201ENST00000331194 APOA2P02652 100 aa10.95□□□□□ -0.66
CCDC88C-201ENST00000331194 SMAGPQ0VAQ4 97 aa10.95□□□□□ -0.66
CCDC88C-201ENST00000331194 C12orf54Q6X4T0 127 aa10.95□□□□□ -0.66
CCDC88C-201ENST00000331194 CD177Q8N6Q3 437 aa10.95□□□□□ -0.66
CCDC88C-201ENST00000331194 OR4S2Q8NH73 311 aa10.95□□□□□ -0.66
CCDC88C-201ENST00000331194 WIPF2Q8TF74 440 aaPredicted RBP10.95□□□□□ -0.66
CCDC88C-201ENST00000331194 GTSF1LQ9H1H1 148 aa10.95□□□□□ -0.66
CCDC88C-201ENST00000331194 A0A1W2PRE2 83 aa10.95□□□□□ -0.66
CCDC88C-201ENST00000331194 C15orf61A6NNL5 157 aa10.95□□□□□ -0.66
CCDC88C-201ENST00000331194 CD5LO43866 347 aa10.95□□□□□ -0.66
CCDC88C-201ENST00000331194 PPP1R32Q7Z5V6 425 aa10.95□□□□□ -0.66
CCDC88C-201ENST00000331194 OR2V2Q96R30 315 aa10.95□□□□□ -0.66
CCDC88C-201ENST00000331194 SLC25A33Q9BSK2 321 aa10.95□□□□□ -0.66
CCDC88C-201ENST00000331194 ENY2Q9NPA8 101 aa10.95□□□□□ -0.66
CCDC88C-201ENST00000331194 IDI2-AS1Q9NZ38 188 aa10.95□□□□□ -0.66
CCDC88C-201ENST00000331194 RELNP78509 3460 aa10.95□□□□□ -0.66
CCDC88C-201ENST00000331194 ARF6P62330 175 aa10.95□□□□□ -0.66
CCDC88C-201ENST00000331194 SCGB2A2Q13296 93 aa10.95□□□□□ -0.66
CCDC88C-201ENST00000331194 TMEM116Q8NCL8 245 aa10.95□□□□□ -0.66
CCDC88C-201ENST00000331194 GRAMD2BQ96HH9 432 aa10.95□□□□□ -0.66
CCDC88C-201ENST00000331194 PGLYRP4Q96LB8 373 aa10.95□□□□□ -0.66
CCDC88C-201ENST00000331194 JMJD8Q96S16 334 aa10.95□□□□□ -0.66
CCDC88C-201ENST00000331194 HILPDAQ9Y5L2 63 aa10.95□□□□□ -0.66
CCDC88C-201ENST00000331194 G3V4G9 280 aa10.94□□□□□ -0.66
CCDC88C-201ENST00000331194 GPR183P32249 361 aa10.94□□□□□ -0.66
CCDC88C-201ENST00000331194 HSPE1P61604 102 aaKnown RBP10.94□□□□□ -0.66
CCDC88C-201ENST00000331194 OR10W1Q8NGF6 305 aa10.94□□□□□ -0.66
CCDC88C-201ENST00000331194 FAM167A-AS1Q96KT0 104 aa10.94□□□□□ -0.66
CCDC88C-201ENST00000331194 SLC25A2Q9BXI2 301 aa10.94□□□□□ -0.66
CCDC88C-201ENST00000331194 IGHV3OR15-7A0A075B7D8 119 aa10.94□□□□□ -0.66
CCDC88C-201ENST00000331194 CRXO43186 299 aaPredicted RBP10.94□□□□□ -0.66
CCDC88C-201ENST00000331194 C8orf88P0DMB2 117 aa10.94□□□□□ -0.66
CCDC88C-201ENST00000331194 TBC1D28Q2M2D7 210 aa10.94□□□□□ -0.66
CCDC88C-201ENST00000331194 WDR82Q6UXN9 313 aa10.94□□□□□ -0.66
CCDC88C-201ENST00000331194 ABI3Q9P2A4 366 aa10.94□□□□□ -0.66
CCDC88C-201ENST00000331194 H3BTX0 84 aa10.93□□□□□ -0.66
CCDC88C-201ENST00000331194 OR2J3O76001 311 aa10.93□□□□□ -0.66
CCDC88C-201ENST00000331194 C2orf91Q6ZV80 131 aa10.93□□□□□ -0.66
CCDC88C-201ENST00000331194 C5orf17Q8NAS9 161 aa10.93□□□□□ -0.66
CCDC88C-201ENST00000331194 IFI27L2Q9H2X8 130 aa10.93□□□□□ -0.66
CCDC88C-201ENST00000331194 ZNRD1Q9P1U0 126 aa10.93□□□□□ -0.66
CCDC88C-201ENST00000331194 PPIAL4GP0DN37 164 aa10.93□□□□□ -0.66
CCDC88C-201ENST00000331194 Q71RC1 249 aaPredicted RBP10.93□□□□□ -0.66
CCDC88C-201ENST00000331194 ZNRF1Q8ND25 227 aa10.93□□□□□ -0.66
CCDC88C-201ENST00000331194 KLF14Q8TD94 323 aaPredicted RBP10.93□□□□□ -0.66
CCDC88C-201ENST00000331194 RAB37Q96AX2 223 aa10.93□□□□□ -0.66
CCDC88C-201ENST00000331194 PEF1Q9UBV8 284 aaKnown RBP10.93□□□□□ -0.66
CCDC88C-201ENST00000331194 OR51B2Q9Y5P1 312 aa10.93□□□□□ -0.66
CCDC88C-201ENST00000331194 PCSK5Q92824 1860 aa10.93□□□□□ -0.66
CCDC88C-201ENST00000331194 LYZL6O75951 148 aa10.93□□□□□ -0.66
CCDC88C-201ENST00000331194 AGFG2O95081 481 aa10.93□□□□□ -0.66
CCDC88C-201ENST00000331194 NCR2O95944 276 aa10.93□□□□□ -0.66
CCDC88C-201ENST00000331194 FABP6P51161 128 aa10.93□□□□□ -0.66
CCDC88C-201ENST00000331194 GTSF1Q8WW33 167 aa10.93□□□□□ -0.66
CCDC88C-201ENST00000331194 TMEM191AQ9H0A3 160 aa10.93□□□□□ -0.66
CCDC88C-201ENST00000331194 H3BUT2 72 aa10.92□□□□□ -0.66
CCDC88C-201ENST00000331194 J3QR06 171 aa10.92□□□□□ -0.66
CCDC88C-201ENST00000331194 FAM90A1Q86YD7 464 aa10.92□□□□□ -0.66
CCDC88C-201ENST00000331194 BLNKQ8WV28 456 aa10.92□□□□□ -0.66
CCDC88C-201ENST00000331194 TRGV8A0A0C4DH27 118 aa10.92□□□□□ -0.66
CCDC88C-201ENST00000331194 A0A1B0GV72 72 aa10.92□□□□□ -0.66
CCDC88C-201ENST00000331194 A0A1B0GXF2 115 aa10.92□□□□□ -0.66
CCDC88C-201ENST00000331194 PEX7O00628 323 aa10.92□□□□□ -0.66
CCDC88C-201ENST00000331194 IL11RAQ14626 422 aa10.92□□□□□ -0.66
CCDC88C-201ENST00000331194 BHLHA15Q7RTS1 189 aaPredicted RBP10.92□□□□□ -0.66
CCDC88C-201ENST00000331194 TMUB1Q9BVT8 246 aa10.92□□□□□ -0.66
CCDC88C-201ENST00000331194 TMEM14BQ9NUH8 114 aa10.92□□□□□ -0.66
CCDC88C-201ENST00000331194 AZU1P20160 251 aa10.91□□□□□ -0.66
CCDC88C-201ENST00000331194 CEACAM3P40198 252 aa10.91□□□□□ -0.66
CCDC88C-201ENST00000331194 TAS2R45P59539 299 aa10.91□□□□□ -0.66
CCDC88C-201ENST00000331194 ZNF329Q86UD4 541 aa10.91□□□□□ -0.66
CCDC88C-201ENST00000331194 HTR1DP28221 377 aa10.91□□□□□ -0.66
CCDC88C-201ENST00000331194 LOXL3P58215 753 aa10.91□□□□□ -0.66
CCDC88C-201ENST00000331194 HIST1H1AQ02539 215 aaPredicted RBP10.91□□□□□ -0.66
CCDC88C-201ENST00000331194 STXBP6Q8NFX7 210 aa10.91□□□□□ -0.66
CCDC88C-201ENST00000331194 NANOS1Q8WY41 292 aaKnown RBP10.91□□□□□ -0.66
CCDC88C-201ENST00000331194 DUSP23Q9BVJ7 150 aa10.91□□□□□ -0.66
CCDC88C-201ENST00000331194 BOKQ9UMX3 212 aaPredicted RBP10.91□□□□□ -0.66
CCDC88C-201ENST00000331194 FAM90A9PA6NNJ1 464 aa10.91□□□□□ -0.66
CCDC88C-201ENST00000331194 ADH4P08319 380 aa10.91□□□□□ -0.66
CCDC88C-201ENST00000331194 PRDX2P32119 198 aa10.91□□□□□ -0.66
CCDC88C-201ENST00000331194 RASL11AQ6T310 242 aa10.91□□□□□ -0.66
CCDC88C-201ENST00000331194 TMEM251Q8N6I4 163 aa10.91□□□□□ -0.66
CCDC88C-201ENST00000331194 SRRM4A7MD48 611 aaKnown RBP10.9□□□□□ -0.66
CCDC88C-201ENST00000331194 IGKV1-16P04430 117 aa10.9□□□□□ -0.66
CCDC88C-201ENST00000331194 HBBP68871 147 aa10.9□□□□□ -0.66
CCDC88C-201ENST00000331194 PLGLB1Q02325 96 aa10.9□□□□□ -0.66
CCDC88C-201ENST00000331194 DDB2Q92466 427 aa10.9□□□□□ -0.66
CCDC88C-201ENST00000331194 ASCL2Q99929 193 aa10.9□□□□□ -0.66
CCDC88C-201ENST00000331194 MAP1LC3CQ9BXW4 147 aa10.9□□□□□ -0.66
CCDC88C-201ENST00000331194 ZZEF1O43149 2961 aa10.9□□□□□ -0.66
CCDC88C-201ENST00000331194 TRAV26-1A0A087WT03 109 aa10.9□□□□□ -0.66
CCDC88C-201ENST00000331194 SAA2P0DJI9 122 aaPredicted RBP10.9□□□□□ -0.66
CCDC88C-201ENST00000331194 CT45A1Q5HYN5 189 aa10.9□□□□□ -0.66
CCDC88C-201ENST00000331194 CT45A3Q8NHU0 189 aa10.9□□□□□ -0.66
CCDC88C-201ENST00000331194 LRRC29Q8WV35 223 aa10.9□□□□□ -0.66
CCDC88C-201ENST00000331194 C7orf69Q9H7B7 122 aa10.9□□□□□ -0.66
CCDC88C-201ENST00000331194 THYN1Q9P016 225 aa10.9□□□□□ -0.66
CCDC88C-201ENST00000331194 IQCF6A8MYZ5 107 aa10.89□□□□□ -0.67
CCDC88C-201ENST00000331194 RAB9AP51151 201 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms