RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 NUP35Q8NFH5 326 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 OR4S2Q8NH73 311 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 CNOT1A5YKK6 2376 aaKnown RBP6.44□□□□□ -1.38
VMA21-201ENST00000330374 PCSK5Q92824 1860 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 SAA2-SAA4A0A096LPE2 208 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 WISP2O76076 250 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 CSN3P07498 182 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 SAA2P0DJI9 122 aaPredicted RBP6.44□□□□□ -1.38
VMA21-201ENST00000330374 SELENOVP59797 346 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 SPRNQ5BIV9 151 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 MTURNQ8N3F0 131 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 SNRNP40Q96DI7 357 aaKnown RBP6.44□□□□□ -1.38
VMA21-201ENST00000330374 IFI27L2Q9H2X8 130 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 HES4Q9HCC6 221 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 TNFRSF19Q9NS68 423 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 IGHV2OR16-5A0A0B4J2B6 119 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 OR2T8A6NH00 312 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 OR4C46A6NHA9 309 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 HIGD1CA8MV81 97 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 ISLRO14498 428 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 PSG1P11464 419 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 PRR20EP86478 221 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 PRR20CP86479 221 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 PRR20DP86480 221 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 PRR20BP86481 221 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 PRR20AP86496 221 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 GABRA6Q16445 453 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 SPRR3Q9UBC9 169 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 SSBP2P81877 361 aaPredicted RBP6.44□□□□□ -1.38
VMA21-201ENST00000330374 SERTAD4-AS1Q5TG53 156 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 PMS2CLQ68D20 193 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 GAL3ST2Q9H3Q3 398 aa6.44□□□□□ -1.38
VMA21-201ENST00000330374 AMMECR1Q9Y4X0 333 aaPredicted RBP6.44□□□□□ -1.38
VMA21-201ENST00000330374 IGKV1D-17A0A075B6S4 117 aa6.43□□□□□ -1.38
VMA21-201ENST00000330374 IGHV2-26A0A0B4J1V2 119 aa6.43□□□□□ -1.38
VMA21-201ENST00000330374 IGKV1-16P04430 117 aa6.43□□□□□ -1.38
VMA21-201ENST00000330374 APELAP0DMC3 54 aa6.43□□□□□ -1.38
VMA21-201ENST00000330374 PPOXP50336 477 aa6.43□□□□□ -1.38
VMA21-201ENST00000330374 SSX8Q7RTT4 187 aa6.43□□□□□ -1.38
VMA21-201ENST00000330374 WDR31Q8NA23 367 aa6.43□□□□□ -1.38
VMA21-201ENST00000330374 NUDT10Q8NFP7 164 aa6.43□□□□□ -1.38
VMA21-201ENST00000330374 NUDT11Q96G61 164 aa6.43□□□□□ -1.38
VMA21-201ENST00000330374 YAE1D1Q9NRH1 226 aa6.43□□□□□ -1.38
VMA21-201ENST00000330374 IDI2-AS1Q9NZ38 188 aa6.43□□□□□ -1.38
VMA21-201ENST00000330374 PTPRBP23467 1997 aa6.43□□□□□ -1.38
VMA21-201ENST00000330374 TRGV5A0A0B4J1U4 118 aa6.43□□□□□ -1.38
VMA21-201ENST00000330374 SMIM27A0A1W2PRY6 76 aa6.43□□□□□ -1.38
VMA21-201ENST00000330374 TGFAP01135 160 aa6.43□□□□□ -1.38
VMA21-201ENST00000330374 REG1BP48304 166 aa6.43□□□□□ -1.38
VMA21-201ENST00000330374 TAS2R45P59539 299 aa6.43□□□□□ -1.38
VMA21-201ENST00000330374 CT45A1Q5HYN5 189 aa6.43□□□□□ -1.38
VMA21-201ENST00000330374 SAPCD1Q5SSQ6 148 aa6.43□□□□□ -1.38
VMA21-201ENST00000330374 CT45A3Q8NHU0 189 aa6.43□□□□□ -1.38
VMA21-201ENST00000330374 CALYQ9NYX4 217 aa6.43□□□□□ -1.38
VMA21-201ENST00000330374 KLF13Q9Y2Y9 288 aaPredicted RBP6.43□□□□□ -1.38
VMA21-201ENST00000330374 SPRY3O43610 288 aa6.43□□□□□ -1.38
VMA21-201ENST00000330374 LY96Q9Y6Y9 160 aa6.43□□□□□ -1.38
VMA21-201ENST00000330374 SPENQ96T58 3664 aaKnown RBP6.43□□□□□ -1.38
VMA21-201ENST00000330374 DMXL2Q8TDJ6 3036 aa6.43□□□□□ -1.38
VMA21-201ENST00000330374 IGHV3-21A0A0B4J1V1 117 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 MUC21A0A0G2JKD1 596 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 MUC21A0A140T8X8 626 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 IGLC7A0M8Q6 106 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 C8orf88P0DMB2 117 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 MUC21Q5SSG8 566 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 AMMECR1LQ6DCA0 310 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 KIR3DS1Q14943 382 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 VWA1Q6PCB0 445 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 PGLYRP4Q96LB8 373 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 SAP30LQ9HAJ7 183 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 MRPS16Q9Y3D3 137 aaKnown RBP6.42□□□□□ -1.38
VMA21-201ENST00000330374 COX7A2P2O60397 106 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 TNFSF15O95150 251 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 TBR1Q16650 682 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 OR4F17Q8NGA8 305 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 OR8B3Q8NGG8 313 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 TMEM70Q9BUB7 260 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 DSCAMO60469 2012 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 LAMA5O15230 3695 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 EP300Q09472 2414 aaPredicted RBP6.42□□□□□ -1.38
VMA21-201ENST00000330374 A0A087X0K7 114 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 IGHV1-69-2A0A0G2JMI3 117 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 KLRC4-KLRK1H3BQV0 150 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 NDUFS8O00217 210 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 CECR9P0C854 216 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 LOXL3P58215 753 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 CCDC144NLQ6NUI1 221 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 CORO2AQ92828 525 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 IGF2BP2-AS1Q96M15 143 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 ASCL2Q99929 193 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 NAA38Q9BRA0 125 aaKnown RBP6.42□□□□□ -1.38
VMA21-201ENST00000330374 JPT1Q9UK76 154 aa6.42□□□□□ -1.38
VMA21-201ENST00000330374 SRRM4A7MD48 611 aaKnown RBP6.41□□□□□ -1.38
VMA21-201ENST00000330374 REG1AP05451 166 aa6.41□□□□□ -1.38
VMA21-201ENST00000330374 ORM2P19652 201 aa6.41□□□□□ -1.38
VMA21-201ENST00000330374 SCGB2A2Q13296 93 aa6.41□□□□□ -1.38
VMA21-201ENST00000330374 SLC25A33Q9BSK2 321 aa6.41□□□□□ -1.38
VMA21-201ENST00000330374 IGHV2-70DA0A0C4DH43 119 aa6.41□□□□□ -1.38
VMA21-201ENST00000330374 SLC25A5P05141 298 aaKnown RBP6.41□□□□□ -1.38
VMA21-201ENST00000330374 UQCRFS1P47985 274 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms