RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 FXYD5Q96DB9 178 aa11.65□□□□□ -0.55
TPM3-206ENST00000330188 TRGV9Q99603 122 aa11.65□□□□□ -0.55
TPM3-206ENST00000330188 LY6HO94772 140 aa11.64□□□□□ -0.55
TPM3-206ENST00000330188 GZMBP10144 247 aa11.64□□□□□ -0.55
TPM3-206ENST00000330188 PAX2Q02962 417 aa11.64□□□□□ -0.55
TPM3-206ENST00000330188 SSX2Q16385 188 aa11.64□□□□□ -0.55
TPM3-206ENST00000330188 C9orf152Q5JTZ5 239 aa11.64□□□□□ -0.55
TPM3-206ENST00000330188 ZNF329Q86UD4 541 aa11.64□□□□□ -0.55
TPM3-206ENST00000330188 TMEM116Q8NCL8 245 aa11.64□□□□□ -0.55
TPM3-206ENST00000330188 OR1L6Q8NGR2 347 aa11.64□□□□□ -0.55
TPM3-206ENST00000330188 FBXL15Q9H469 300 aa11.64□□□□□ -0.55
TPM3-206ENST00000330188 ONECUT1Q9UBC0 465 aa11.64□□□□□ -0.55
TPM3-206ENST00000330188 A0A1B0GUS0 222 aa11.63□□□□□ -0.55
TPM3-206ENST00000330188 ISLRO14498 428 aa11.63□□□□□ -0.55
TPM3-206ENST00000330188 LIPFP07098 398 aa11.63□□□□□ -0.55
TPM3-206ENST00000330188 TAS2R60P59551 318 aa11.63□□□□□ -0.55
TPM3-206ENST00000330188 LDLRAD2Q5SZI1 272 aa11.63□□□□□ -0.55
TPM3-206ENST00000330188 OR8I2Q8N0Y5 310 aa11.63□□□□□ -0.55
TPM3-206ENST00000330188 CDC42EP3Q9UKI2 254 aa11.63□□□□□ -0.55
TPM3-206ENST00000330188 F11RQ9Y624 299 aaKnown RBP11.63□□□□□ -0.55
TPM3-206ENST00000330188 IGHV3-21A0A0B4J1V1 117 aa11.63□□□□□ -0.55
TPM3-206ENST00000330188 CORTO00230 105 aa11.63□□□□□ -0.55
TPM3-206ENST00000330188 FRMD6-AS1P0C7T7 363 aa11.63□□□□□ -0.55
TPM3-206ENST00000330188 ORM2P19652 201 aa11.63□□□□□ -0.55
TPM3-206ENST00000330188 FXYD3Q14802 87 aa11.63□□□□□ -0.55
TPM3-206ENST00000330188 C22orf15Q8WYQ4 148 aa11.63□□□□□ -0.55
TPM3-206ENST00000330188 PERPQ96FX8 193 aa11.63□□□□□ -0.55
TPM3-206ENST00000330188 LINC00479Q96M42 142 aa11.63□□□□□ -0.55
TPM3-206ENST00000330188 RAB1BQ9H0U4 201 aa11.63□□□□□ -0.55
TPM3-206ENST00000330188 MRPL18Q9H0U6 180 aaKnown RBP11.63□□□□□ -0.55
TPM3-206ENST00000330188 MGST1P10620 155 aaKnown RBP11.62□□□□□ -0.55
TPM3-206ENST00000330188 TMEM256Q8N2U0 113 aa11.62□□□□□ -0.55
TPM3-206ENST00000330188 OR1B1Q8NGR6 318 aa11.62□□□□□ -0.55
TPM3-206ENST00000330188 FCN1O00602 326 aa11.62□□□□□ -0.55
TPM3-206ENST00000330188 PEX7O00628 323 aa11.62□□□□□ -0.55
TPM3-206ENST00000330188 IBA57Q5T440 356 aaKnown RBP11.62□□□□□ -0.55
TPM3-206ENST00000330188 C11orf71Q6IPW1 123 aa11.62□□□□□ -0.55
TPM3-206ENST00000330188 SRSF12Q8WXF0 261 aaKnown RBP11.62□□□□□ -0.55
TPM3-206ENST00000330188 RNF5Q99942 180 aa11.62□□□□□ -0.55
TPM3-206ENST00000330188 CBLN4Q9NTU7 201 aa11.62□□□□□ -0.55
TPM3-206ENST00000330188 NUPR1O60356 82 aa11.61□□□□□ -0.55
TPM3-206ENST00000330188 MYCNOSP40205 109 aa11.61□□□□□ -0.55
TPM3-206ENST00000330188 IER3P46695 156 aa11.61□□□□□ -0.55
TPM3-206ENST00000330188 CX3CL1P78423 397 aa11.61□□□□□ -0.55
TPM3-206ENST00000330188 NHLH1Q02575 133 aa11.61□□□□□ -0.55
TPM3-206ENST00000330188 FAM209BQ5JX69 171 aa11.61□□□□□ -0.55
TPM3-206ENST00000330188 TPTE2P1Q5T6R2 138 aa11.61□□□□□ -0.55
TPM3-206ENST00000330188 RELNP78509 3460 aa11.61□□□□□ -0.55
TPM3-206ENST00000330188 ANKHD1Q8IWZ3 2542 aaKnown RBP11.61□□□□□ -0.55
TPM3-206ENST00000330188 GRIFINA4D1Z8 144 aa11.6□□□□□ -0.55
TPM3-206ENST00000330188 SNURFLB1AK76 121 aa11.6□□□□□ -0.55
TPM3-206ENST00000330188 TIMM23O14925 209 aa11.6□□□□□ -0.55
TPM3-206ENST00000330188 SNRPCP09234 159 aaKnown RBP11.6□□□□□ -0.55
TPM3-206ENST00000330188 NHLRC2Q8NBF2 726 aa11.6□□□□□ -0.55
TPM3-206ENST00000330188 STXBP6Q8NFX7 210 aa11.6□□□□□ -0.55
TPM3-206ENST00000330188 TP53TG3Q9ULZ0 132 aa11.6□□□□□ -0.55
TPM3-206ENST00000330188 TRBV9A0A0B4J1U6 114 aa11.6□□□□□ -0.55
TPM3-206ENST00000330188 PLP1P60201 277 aa11.6□□□□□ -0.55
TPM3-206ENST00000330188 PKIAP61925 76 aa11.6□□□□□ -0.55
TPM3-206ENST00000330188 ARF6P62330 175 aa11.6□□□□□ -0.55
TPM3-206ENST00000330188 LHFPL4Q7Z7J7 247 aa11.6□□□□□ -0.55
TPM3-206ENST00000330188 TIMD4Q96H15 378 aa11.6□□□□□ -0.55
TPM3-206ENST00000330188 GNB1LQ9BYB4 327 aa11.6□□□□□ -0.55
TPM3-206ENST00000330188 GSX1Q9H4S2 264 aaPredicted RBP11.6□□□□□ -0.55
TPM3-206ENST00000330188 TRAV34A0A0B4J273 112 aa11.59□□□□□ -0.55
TPM3-206ENST00000330188 SMIM27A0A1W2PRY6 76 aa11.59□□□□□ -0.55
TPM3-206ENST00000330188 HYPMO75409 117 aa11.59□□□□□ -0.55
TPM3-206ENST00000330188 PLGLAQ15195 96 aa11.59□□□□□ -0.55
TPM3-206ENST00000330188 OR11H6Q8NGC7 330 aa11.59□□□□□ -0.55
TPM3-206ENST00000330188 HTR1DP28221 377 aa11.59□□□□□ -0.55
TPM3-206ENST00000330188 TCL1AP56279 114 aa11.59□□□□□ -0.55
TPM3-206ENST00000330188 LINC00310P59036 64 aa11.59□□□□□ -0.55
TPM3-206ENST00000330188 RANP62826 216 aaKnown RBP11.59□□□□□ -0.55
TPM3-206ENST00000330188 GNG5P63218 68 aa11.59□□□□□ -0.55
TPM3-206ENST00000330188 BLNKQ8WV28 456 aa11.59□□□□□ -0.55
TPM3-206ENST00000330188 CFHR4Q92496 578 aa11.59□□□□□ -0.55
TPM3-206ENST00000330188 PRO1933Q9H354 126 aa11.59□□□□□ -0.55
TPM3-206ENST00000330188 ARHGAP32A7KAX9 2087 aa11.58□□□□□ -0.56
TPM3-206ENST00000330188 I3L2K1 104 aa11.58□□□□□ -0.56
TPM3-206ENST00000330188 SPINK4O60575 86 aa11.58□□□□□ -0.56
TPM3-206ENST00000330188 IGLC1P0CG04 106 aa11.58□□□□□ -0.56
TPM3-206ENST00000330188 GP9P14770 177 aa11.58□□□□□ -0.56
TPM3-206ENST00000330188 CRISP2P16562 243 aa11.58□□□□□ -0.56
TPM3-206ENST00000330188 KLRD1Q13241 179 aa11.58□□□□□ -0.56
TPM3-206ENST00000330188 MMDQ15546 238 aa11.58□□□□□ -0.56
TPM3-206ENST00000330188 BAGE2Q86Y30 109 aa11.58□□□□□ -0.56
TPM3-206ENST00000330188 NEU4Q8WWR8 484 aaPredicted RBP11.58□□□□□ -0.56
TPM3-206ENST00000330188 SRSF8Q9BRL6 282 aaKnown RBP11.58□□□□□ -0.56
TPM3-206ENST00000330188 SERTAD4Q9NUC0 356 aa11.58□□□□□ -0.56
TPM3-206ENST00000330188 DPM3Q9P2X0 92 aa11.58□□□□□ -0.56
TPM3-206ENST00000330188 EPDR1Q9UM22 224 aa11.58□□□□□ -0.56
TPM3-206ENST00000330188 ABCA4P78363 2273 aa11.57□□□□□ -0.56
TPM3-206ENST00000330188 ZNF705GA8MUZ8 300 aaPredicted RBP11.57□□□□□ -0.56
TPM3-206ENST00000330188 NBEAP1P0C6P0 100 aa11.57□□□□□ -0.56
TPM3-206ENST00000330188 RPL19P84098 196 aaKnown RBP11.57□□□□□ -0.56
TPM3-206ENST00000330188 TMEM183BQ1AE95 376 aa11.57□□□□□ -0.56
TPM3-206ENST00000330188 TMEM136Q6ZRR5 245 aa11.57□□□□□ -0.56
TPM3-206ENST00000330188 FAM231DQ6ZW35 169 aa11.57□□□□□ -0.56
TPM3-206ENST00000330188 CMTM2Q8TAZ6 248 aa11.57□□□□□ -0.56
TPM3-206ENST00000330188 SSBP3Q9BWW4 388 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms