RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 GAGE12FP0CL80 117 aa9.72□□□□□ -0.85
SHMT2-201ENST00000328923 GAGE12GP0CL81 117 aa9.72□□□□□ -0.85
SHMT2-201ENST00000328923 GAGE12IP0CL82 117 aa9.72□□□□□ -0.85
SHMT2-201ENST00000328923 TAS2R45P59539 299 aa9.72□□□□□ -0.85
SHMT2-201ENST00000328923 GAGE4Q13068 117 aa9.72□□□□□ -0.85
SHMT2-201ENST00000328923 GAGE13Q4V321 117 aa9.72□□□□□ -0.85
SHMT2-201ENST00000328923 NHLRC2Q8NBF2 726 aa9.72□□□□□ -0.85
SHMT2-201ENST00000328923 OR4X2Q8NGF9 303 aa9.72□□□□□ -0.85
SHMT2-201ENST00000328923 CHCHD1Q96BP2 118 aaKnown RBP9.72□□□□□ -0.85
SHMT2-201ENST00000328923 PRO0461Q9UI25 63 aa9.72□□□□□ -0.85
SHMT2-201ENST00000328923 FER1L5A0AVI2 2057 aa9.71□□□□□ -0.85
SHMT2-201ENST00000328923 TRBV6-6A0A0A6YYG2 114 aa9.71□□□□□ -0.85
SHMT2-201ENST00000328923 CT45A6P0DMU7 189 aa9.71□□□□□ -0.85
SHMT2-201ENST00000328923 CT45A5P0DMU8 189 aa9.71□□□□□ -0.85
SHMT2-201ENST00000328923 CT45A7P0DMV0 189 aa9.71□□□□□ -0.85
SHMT2-201ENST00000328923 GCHFRP30047 84 aa9.71□□□□□ -0.85
SHMT2-201ENST00000328923 CT45A1Q5HYN5 189 aa9.71□□□□□ -0.85
SHMT2-201ENST00000328923 ZFAND6Q6FIF0 208 aa9.71□□□□□ -0.85
SHMT2-201ENST00000328923 ANKRD37Q7Z713 158 aa9.71□□□□□ -0.85
SHMT2-201ENST00000328923 FADS6Q8N9I5 356 aa9.71□□□□□ -0.85
SHMT2-201ENST00000328923 NUP35Q8NFH5 326 aa9.71□□□□□ -0.85
SHMT2-201ENST00000328923 OR9G4Q8NGQ1 327 aa9.71□□□□□ -0.85
SHMT2-201ENST00000328923 CT45A3Q8NHU0 189 aa9.71□□□□□ -0.85
SHMT2-201ENST00000328923 PHLDA1Q8WV24 401 aaPredicted RBP9.71□□□□□ -0.85
SHMT2-201ENST00000328923 IL1F10Q8WWZ1 152 aa9.71□□□□□ -0.85
SHMT2-201ENST00000328923 ESPL1Q14674 2120 aa9.71□□□□□ -0.86
SHMT2-201ENST00000328923 DYSFO75923 2080 aa9.71□□□□□ -0.86
SHMT2-201ENST00000328923 FOXH1O75593 365 aa9.71□□□□□ -0.86
SHMT2-201ENST00000328923 SPINK9Q5DT21 86 aa9.71□□□□□ -0.86
SHMT2-201ENST00000328923 PPP1R32Q7Z5V6 425 aa9.71□□□□□ -0.86
SHMT2-201ENST00000328923 ZDHHC16Q969W1 377 aa9.71□□□□□ -0.86
SHMT2-201ENST00000328923 PRELID3AQ96N28 172 aa9.71□□□□□ -0.86
SHMT2-201ENST00000328923 TNRC6BQ9UPQ9 1833 aaKnown RBP9.7□□□□□ -0.86
SHMT2-201ENST00000328923 PI4KAP42356 2102 aa9.7□□□□□ -0.86
SHMT2-201ENST00000328923 TRBV20-1A0A075B6N2 111 aa9.7□□□□□ -0.86
SHMT2-201ENST00000328923 HSPB6O14558 160 aa9.7□□□□□ -0.86
SHMT2-201ENST00000328923 TNFSF11O14788 317 aa9.7□□□□□ -0.86
SHMT2-201ENST00000328923 BCL3P20749 454 aa9.7□□□□□ -0.86
SHMT2-201ENST00000328923 NBL1P41271 181 aa9.7□□□□□ -0.86
SHMT2-201ENST00000328923 FGF12P61328 243 aa9.7□□□□□ -0.86
SHMT2-201ENST00000328923 PSG5Q15238 335 aa9.7□□□□□ -0.86
SHMT2-201ENST00000328923 RASL11AQ6T310 242 aa9.7□□□□□ -0.86
SHMT2-201ENST00000328923 PCSK4Q6UW60 755 aa9.7□□□□□ -0.86
SHMT2-201ENST00000328923 PCP2Q8IVA1 136 aa9.7□□□□□ -0.86
SHMT2-201ENST00000328923 ZNF502Q8TBZ5 544 aa9.7□□□□□ -0.86
SHMT2-201ENST00000328923 PKIBQ9C010 78 aa9.7□□□□□ -0.86
SHMT2-201ENST00000328923 IGHV3-20A0A0C4DH32 117 aa9.7□□□□□ -0.86
SHMT2-201ENST00000328923 NPIPB11E5RHQ5 1161 aa9.7□□□□□ -0.86
SHMT2-201ENST00000328923 ZG16O60844 167 aa9.7□□□□□ -0.86
SHMT2-201ENST00000328923 IGLV2-8P01709 118 aa9.7□□□□□ -0.86
SHMT2-201ENST00000328923 C5orf47Q569G3 176 aa9.7□□□□□ -0.86
SHMT2-201ENST00000328923 FAM162BQ5T6X4 162 aa9.7□□□□□ -0.86
SHMT2-201ENST00000328923 TMEM178AQ8NBL3 297 aa9.7□□□□□ -0.86
SHMT2-201ENST00000328923 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-201ENST00000328923 ZNF355PQ9NSJ1 428 aa9.7□□□□□ -0.86
SHMT2-201ENST00000328923 ZNF407Q9C0G0 2248 aa9.69□□□□□ -0.86
SHMT2-201ENST00000328923 IGLV3-12A0A075B6K2 115 aa9.69□□□□□ -0.86
SHMT2-201ENST00000328923 E9PLD3 99 aa9.69□□□□□ -0.86
SHMT2-201ENST00000328923 PMS2CLQ68D20 193 aa9.69□□□□□ -0.86
SHMT2-201ENST00000328923 NFE4Q86UQ8 179 aa9.69□□□□□ -0.86
SHMT2-201ENST00000328923 BCL6BQ8N143 479 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-201ENST00000328923 TEX29Q8N6K0 151 aa9.69□□□□□ -0.86
SHMT2-201ENST00000328923 Q8TCH9 128 aa9.69□□□□□ -0.86
SHMT2-201ENST00000328923 TRIB1Q96RU8 372 aa9.69□□□□□ -0.86
SHMT2-201ENST00000328923 CSDC2Q9Y534 153 aaKnown RBP9.69□□□□□ -0.86
SHMT2-201ENST00000328923 C3orf80F5H4A9 247 aa9.68□□□□□ -0.86
SHMT2-201ENST00000328923 OR5AL1P0C617 328 aa9.68□□□□□ -0.86
SHMT2-201ENST00000328923 G6PCP35575 357 aa9.68□□□□□ -0.86
SHMT2-201ENST00000328923 MIC13Q5XKP0 118 aa9.68□□□□□ -0.86
SHMT2-201ENST00000328923 LINC00596Q86U02 117 aa9.68□□□□□ -0.86
SHMT2-201ENST00000328923 KIR2DL4Q99706 377 aa9.68□□□□□ -0.86
SHMT2-201ENST00000328923 LIN7CQ9NUP9 197 aaKnown RBP9.68□□□□□ -0.86
SHMT2-201ENST00000328923 LSM4Q9Y4Z0 139 aaKnown RBP9.68□□□□□ -0.86
SHMT2-201ENST00000328923 CNTRLQ7Z7A1 2325 aa9.68□□□□□ -0.86
SHMT2-201ENST00000328923 PIP4P2Q8N4L2 257 aa9.68□□□□□ -0.86
SHMT2-201ENST00000328923 FSCN3Q9NQT6 498 aa9.68□□□□□ -0.86
SHMT2-201ENST00000328923 NHP2Q9NX24 153 aaKnown RBP9.68□□□□□ -0.86
SHMT2-201ENST00000328923 POLDIP2Q9Y2S7 368 aa9.68□□□□□ -0.86
SHMT2-201ENST00000328923 ASPMQ8IZT6 3477 aa9.68□□□□□ -0.86
SHMT2-201ENST00000328923 CACNA1AO00555 2505 aa9.68□□□□□ -0.86
SHMT2-201ENST00000328923 LY6G6EA0A0G2JKS1 128 aa9.67□□□□□ -0.86
SHMT2-201ENST00000328923 C16orf97H3BN30 126 aa9.67□□□□□ -0.86
SHMT2-201ENST00000328923 CT45A10P0DMU9 189 aa9.67□□□□□ -0.86
SHMT2-201ENST00000328923 OPRK1P41145 380 aa9.67□□□□□ -0.86
SHMT2-201ENST00000328923 GUSBP11Q6P575 273 aa9.67□□□□□ -0.86
SHMT2-201ENST00000328923 SAP25Q8TEE9 199 aa9.67□□□□□ -0.86
SHMT2-201ENST00000328923 WDR83OSQ9Y284 106 aa9.67□□□□□ -0.86
SHMT2-201ENST00000328923 LOXL2Q9Y4K0 774 aa9.67□□□□□ -0.86
SHMT2-201ENST00000328923 U3KQA8 63 aa9.67□□□□□ -0.86
SHMT2-201ENST00000328923 CEP250Q9BV73 2442 aa9.67□□□□□ -0.86
SHMT2-201ENST00000328923 IGLL5B9A064 214 aa9.67□□□□□ -0.86
SHMT2-201ENST00000328923 NMUP48645 174 aa9.67□□□□□ -0.86
SHMT2-201ENST00000328923 TRAT1Q6PIZ9 186 aa9.67□□□□□ -0.86
SHMT2-201ENST00000328923 FGFRL1Q8N441 504 aa9.67□□□□□ -0.86
SHMT2-201ENST00000328923 PIGCQ92535 297 aa9.67□□□□□ -0.86
SHMT2-201ENST00000328923 TMUB1Q9BVT8 246 aa9.67□□□□□ -0.86
SHMT2-201ENST00000328923 IDI2-AS1Q9NZ38 188 aa9.67□□□□□ -0.86
SHMT2-201ENST00000328923 TANC2Q9HCD6 1990 aa9.67□□□□□ -0.86
SHMT2-201ENST00000328923 TEX50A0A1B0GTY4 177 aa9.66□□□□□ -0.86
SHMT2-201ENST00000328923 PLPPR2Q96GM1 343 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms