RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 ZFP92A6NM28 416 aa7.96□□□□□ -1.14
VIPAS39-201ENST00000327028 F8W735 103 aaPredicted RBP7.96□□□□□ -1.14
VIPAS39-201ENST00000327028 AGPAT2O15120 278 aa7.96□□□□□ -1.14
VIPAS39-201ENST00000327028 IFNA7P01567 189 aa7.96□□□□□ -1.14
VIPAS39-201ENST00000327028 IGLC1P0CG04 106 aa7.96□□□□□ -1.14
VIPAS39-201ENST00000327028 OR10J1P30954 320 aa7.96□□□□□ -1.14
VIPAS39-201ENST00000327028 Q56UQ5 140 aa7.96□□□□□ -1.14
VIPAS39-201ENST00000327028 ALKAL2Q6UX46 152 aa7.96□□□□□ -1.14
VIPAS39-201ENST00000327028 OR2G3Q8NGZ4 309 aa7.96□□□□□ -1.14
VIPAS39-201ENST00000327028 OR4F5Q8NH21 305 aa7.96□□□□□ -1.14
VIPAS39-201ENST00000327028 LINC01006Q8NI28 216 aa7.96□□□□□ -1.14
VIPAS39-201ENST00000327028 MYOZ3Q8TDC0 251 aa7.96□□□□□ -1.14
VIPAS39-201ENST00000327028 CCDC140Q96MF4 163 aa7.96□□□□□ -1.14
VIPAS39-201ENST00000327028 IGHV3-23P01764 117 aa7.96□□□□□ -1.14
VIPAS39-201ENST00000327028 WIPF2Q8TF74 440 aaPredicted RBP7.96□□□□□ -1.14
VIPAS39-201ENST00000327028 GAR1Q9NY12 217 aaKnown RBP7.96□□□□□ -1.14
VIPAS39-201ENST00000327028 SLC45A2Q9UMX9 530 aa7.96□□□□□ -1.14
VIPAS39-201ENST00000327028 C2CD3Q4AC94 2353 aa7.95□□□□□ -1.14
VIPAS39-201ENST00000327028 CUBNO60494 3623 aa7.95□□□□□ -1.14
VIPAS39-201ENST00000327028 TRAV30A0A087WSZ9 112 aa7.95□□□□□ -1.14
VIPAS39-201ENST00000327028 TCRBV4S1A1TA0A5B7 111 aa7.95□□□□□ -1.14
VIPAS39-201ENST00000327028 GNG7O60262 68 aa7.95□□□□□ -1.14
VIPAS39-201ENST00000327028 SCGB2A1O75556 95 aa7.95□□□□□ -1.14
VIPAS39-201ENST00000327028 LCNL1Q6ZST4 164 aa7.95□□□□□ -1.14
VIPAS39-201ENST00000327028 CYP2G1PQ6ZSU1 146 aa7.95□□□□□ -1.14
VIPAS39-201ENST00000327028 ZNF767PQ75MW2 155 aa7.95□□□□□ -1.14
VIPAS39-201ENST00000327028 KLHDC1Q8N7A1 406 aa7.95□□□□□ -1.14
VIPAS39-201ENST00000327028 UBQLN2Q9UHD9 624 aa7.95□□□□□ -1.14
VIPAS39-201ENST00000327028 RFNGQ9Y644 331 aa7.95□□□□□ -1.14
VIPAS39-201ENST00000327028 RPL29P47914 159 aaKnown RBP7.95□□□□□ -1.14
VIPAS39-201ENST00000327028 SERF2P84101 59 aa7.95□□□□□ -1.14
VIPAS39-201ENST00000327028 SRSF2Q01130 221 aaKnown RBP7.95□□□□□ -1.14
VIPAS39-201ENST00000327028 PXMP4Q9Y6I8 212 aa7.95□□□□□ -1.14
VIPAS39-201ENST00000327028 RGS13O14921 159 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 IGKV1-17P01599 117 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 RPLP1P05386 114 aaKnown RBP7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 FABP1P07148 127 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 SELENOTP62341 195 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 PRR20EP86478 221 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 PRR20CP86479 221 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 PRR20DP86480 221 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 PRR20BP86481 221 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 PRR20AP86496 221 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 KIAA0141Q14154 515 aaPredicted RBP7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 TIGITQ495A1 244 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 MIC13Q5XKP0 118 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 TMEM182Q6ZP80 229 aaPredicted RBP7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 SLC7A5P1Q8MH63 180 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 STPG3Q8N7X2 389 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 NIPBLQ6KC79 2804 aaeCLIP7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 CLPSL1A2RUU4 121 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 OR2T8A6NH00 312 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 TSPAN15O95858 294 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 GPR183P32249 361 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 ZNF90Q03938 601 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 FAM209BQ5JX69 171 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 FFAR4Q5NUL3 377 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 ZNF343Q6P1L6 599 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 CLEC19AQ6UXS0 136 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 ZNF491Q8N8L2 437 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 OR5AU1Q8NGC0 362 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 OR4X2Q8NGF9 303 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 PLA2G2EQ9NZK7 142 aa7.94□□□□□ -1.14
VIPAS39-201ENST00000327028 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.93□□□□□ -1.14
VIPAS39-201ENST00000327028 UMAD1C9J7I0 102 aa7.93□□□□□ -1.14
VIPAS39-201ENST00000327028 CTSGP08311 255 aa7.93□□□□□ -1.14
VIPAS39-201ENST00000327028 SULT1A2P50226 295 aa7.93□□□□□ -1.14
VIPAS39-201ENST00000327028 ELLP55199 621 aaPredicted RBP7.93□□□□□ -1.14
VIPAS39-201ENST00000327028 YPEL3P61236 119 aaPredicted RBP7.93□□□□□ -1.14
VIPAS39-201ENST00000327028 B2MP61769 119 aa7.93□□□□□ -1.14
VIPAS39-201ENST00000327028 FAM74A1Q5RGS3 127 aa7.93□□□□□ -1.14
VIPAS39-201ENST00000327028 BPIFCQ8NFQ6 507 aa7.93□□□□□ -1.14
VIPAS39-201ENST00000327028 SLC39A9Q9NUM3 307 aa7.93□□□□□ -1.14
VIPAS39-201ENST00000327028 NUPL2O15504 423 aaKnown RBP7.93□□□□□ -1.14
VIPAS39-201ENST00000327028 TGOLN2O43493 480 aa7.93□□□□□ -1.14
VIPAS39-201ENST00000327028 YIF1AO95070 293 aa7.93□□□□□ -1.14
VIPAS39-201ENST00000327028 TOMM40O96008 361 aa7.93□□□□□ -1.14
VIPAS39-201ENST00000327028 IGHV3-11P01762 117 aa7.93□□□□□ -1.14
VIPAS39-201ENST00000327028 CLEC3BP05452 202 aa7.93□□□□□ -1.14
VIPAS39-201ENST00000327028 LINC00869P0C866 280 aa7.93□□□□□ -1.14
VIPAS39-201ENST00000327028 RAB5CP51148 216 aa7.93□□□□□ -1.14
VIPAS39-201ENST00000327028 AKR1C8PQ5T2L2 129 aa7.93□□□□□ -1.14
VIPAS39-201ENST00000327028 SPSB3Q6PJ21 355 aa7.93□□□□□ -1.14
VIPAS39-201ENST00000327028 UBE2E2Q96LR5 201 aa7.93□□□□□ -1.14
VIPAS39-201ENST00000327028 RNF114Q9Y508 228 aa7.93□□□□□ -1.14
VIPAS39-201ENST00000327028 JMJD1CQ15652 2540 aa7.92□□□□□ -1.14
VIPAS39-201ENST00000327028 SETD2Q9BYW2 2564 aaPredicted RBP7.92□□□□□ -1.14
VIPAS39-201ENST00000327028 MBP02144 154 aa7.92□□□□□ -1.14
VIPAS39-201ENST00000327028 GATA2P23769 480 aaPredicted RBP7.92□□□□□ -1.14
VIPAS39-201ENST00000327028 ADMP35318 185 aa7.92□□□□□ -1.14
VIPAS39-201ENST00000327028 PROK1P58294 105 aa7.92□□□□□ -1.14
VIPAS39-201ENST00000327028 ZNF616Q08AN1 781 aa7.92□□□□□ -1.14
VIPAS39-201ENST00000327028 TMEM41BQ5BJD5 291 aa7.92□□□□□ -1.14
VIPAS39-201ENST00000327028 TCTEX1D4Q5JR98 221 aa7.92□□□□□ -1.14
VIPAS39-201ENST00000327028 CHRDL1Q9BU40 450 aa7.92□□□□□ -1.14
VIPAS39-201ENST00000327028 A0A1B0GUS0 222 aa7.92□□□□□ -1.14
VIPAS39-201ENST00000327028 LGALS1P09382 135 aaKnown RBP7.92□□□□□ -1.14
VIPAS39-201ENST00000327028 S100A1P23297 94 aa7.92□□□□□ -1.14
VIPAS39-201ENST00000327028 RAB2AP61019 212 aa7.92□□□□□ -1.14
VIPAS39-201ENST00000327028 ACOT6Q3I5F7 207 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms