RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 NDUFA4L2Q9NRX3 87 aa11.85□□□□□ -0.51
SSBP3-201ENST00000326956 TCRBV4S1A1TA0A5B7 111 aa11.84□□□□□ -0.51
SSBP3-201ENST00000326956 OR2J3O76001 311 aa11.84□□□□□ -0.51
SSBP3-201ENST00000326956 TMEM11P17152 192 aa11.84□□□□□ -0.51
SSBP3-201ENST00000326956 ORM2P19652 201 aa11.84□□□□□ -0.51
SSBP3-201ENST00000326956 HBBP68871 147 aa11.84□□□□□ -0.51
SSBP3-201ENST00000326956 SSBP2P81877 361 aaPredicted RBP11.84□□□□□ -0.51
SSBP3-201ENST00000326956 LINC00305Q7Z4B0 112 aa11.84□□□□□ -0.51
SSBP3-201ENST00000326956 OR4C5Q8NGB2 326 aa11.84□□□□□ -0.51
SSBP3-201ENST00000326956 DAZAP1Q96EP5 407 aaKnown RBP11.84□□□□□ -0.51
SSBP3-201ENST00000326956 GAFA1Q96PS6 74 aa11.84□□□□□ -0.51
SSBP3-201ENST00000326956 NBEAQ8NFP9 2946 aa11.84□□□□□ -0.51
SSBP3-201ENST00000326956 IGHV1-69-2A0A0G2JMI3 117 aa11.84□□□□□ -0.51
SSBP3-201ENST00000326956 PSMB11A5LHX3 300 aa11.84□□□□□ -0.51
SSBP3-201ENST00000326956 PGPA6NDG6 321 aa11.84□□□□□ -0.51
SSBP3-201ENST00000326956 CORTO00230 105 aa11.84□□□□□ -0.51
SSBP3-201ENST00000326956 CA7P43166 264 aa11.84□□□□□ -0.51
SSBP3-201ENST00000326956 REG1BP48304 166 aa11.84□□□□□ -0.51
SSBP3-201ENST00000326956 TCF24Q7RTU0 167 aa11.84□□□□□ -0.51
SSBP3-201ENST00000326956 EPDR1Q9UM22 224 aa11.84□□□□□ -0.51
SSBP3-201ENST00000326956 MUC3AQ02505 3323 aa11.84□□□□□ -0.51
SSBP3-201ENST00000326956 OR4C46A6NHA9 309 aa11.83□□□□□ -0.51
SSBP3-201ENST00000326956 A8MWL6 223 aa11.83□□□□□ -0.51
SSBP3-201ENST00000326956 HSBP1L1C9JCN9 74 aa11.83□□□□□ -0.51
SSBP3-201ENST00000326956 FOXA3P55318 350 aaPredicted RBP11.83□□□□□ -0.51
SSBP3-201ENST00000326956 VAMP3Q15836 100 aa11.83□□□□□ -0.51
SSBP3-201ENST00000326956 STXBP6Q8NFX7 210 aa11.83□□□□□ -0.51
SSBP3-201ENST00000326956 VSTM2AQ8TAG5 236 aa11.83□□□□□ -0.51
SSBP3-201ENST00000326956 FAM222BQ8WU58 562 aa11.83□□□□□ -0.51
SSBP3-201ENST00000326956 GAL3ST2Q9H3Q3 398 aa11.83□□□□□ -0.51
SSBP3-201ENST00000326956 NKX6-3A6NJ46 265 aa11.83□□□□□ -0.52
SSBP3-201ENST00000326956 NKX2-8O15522 239 aa11.83□□□□□ -0.52
SSBP3-201ENST00000326956 PRR31Q5SQ13 230 aa11.83□□□□□ -0.52
SSBP3-201ENST00000326956 PLCE1Q9P212 2302 aa11.83□□□□□ -0.52
SSBP3-201ENST00000326956 TANC2Q9HCD6 1990 aa11.83□□□□□ -0.52
SSBP3-201ENST00000326956 C2orf70A6NJV1 201 aa11.83□□□□□ -0.52
SSBP3-201ENST00000326956 H0YJW9 148 aa11.83□□□□□ -0.52
SSBP3-201ENST00000326956 P01737 135 aa11.83□□□□□ -0.52
SSBP3-201ENST00000326956 OR1B1Q8NGR6 318 aa11.83□□□□□ -0.52
SSBP3-201ENST00000326956 PERPQ96FX8 193 aa11.83□□□□□ -0.52
SSBP3-201ENST00000326956 GPR82Q96P67 336 aa11.83□□□□□ -0.52
SSBP3-201ENST00000326956 ARFGEF3Q5TH69 2177 aa11.82□□□□□ -0.52
SSBP3-201ENST00000326956 RP1L1Q8IWN7 2480 aaPredicted RBP11.82□□□□□ -0.52
SSBP3-201ENST00000326956 DSCAML1Q8TD84 2053 aa11.82□□□□□ -0.52
SSBP3-201ENST00000326956 PATE2Q6UY27 113 aa11.82□□□□□ -0.52
SSBP3-201ENST00000326956 OR10X1Q8NGY0 326 aa11.82□□□□□ -0.52
SSBP3-201ENST00000326956 ST6GALNAC6Q969X2 333 aa11.82□□□□□ -0.52
SSBP3-201ENST00000326956 FXYD5Q96DB9 178 aa11.82□□□□□ -0.52
SSBP3-201ENST00000326956 RPP21Q9H633 154 aaKnown RBP11.82□□□□□ -0.52
SSBP3-201ENST00000326956 LEPROTL1O95214 131 aa11.82□□□□□ -0.52
SSBP3-201ENST00000326956 GATA4P43694 442 aa11.82□□□□□ -0.52
SSBP3-201ENST00000326956 TIMM23BQ5SRD1 257 aa11.82□□□□□ -0.52
SSBP3-201ENST00000326956 ZNF788Q6ZQV5 615 aa11.82□□□□□ -0.52
SSBP3-201ENST00000326956 SSX8Q7RTT4 187 aa11.82□□□□□ -0.52
SSBP3-201ENST00000326956 MUC15Q8N387 334 aa11.82□□□□□ -0.52
SSBP3-201ENST00000326956 C22orf15Q8WYQ4 148 aa11.82□□□□□ -0.52
SSBP3-201ENST00000326956 FNDC4Q9H6D8 234 aaPredicted RBP11.82□□□□□ -0.52
SSBP3-201ENST00000326956 TECTAO75443 2155 aa11.81□□□□□ -0.52
SSBP3-201ENST00000326956 IGLC7A0M8Q6 106 aa11.81□□□□□ -0.52
SSBP3-201ENST00000326956 C19orf67A6NJJ6 358 aa11.81□□□□□ -0.52
SSBP3-201ENST00000326956 CHEK1O14757 476 aa11.81□□□□□ -0.52
SSBP3-201ENST00000326956 TOMM40O96008 361 aa11.81□□□□□ -0.52
SSBP3-201ENST00000326956 FBLN7Q53RD9 439 aa11.81□□□□□ -0.52
SSBP3-201ENST00000326956 C10orf55Q5SWW7 151 aa11.81□□□□□ -0.52
SSBP3-201ENST00000326956 OR4C13Q8NGP0 309 aa11.81□□□□□ -0.52
SSBP3-201ENST00000326956 PGLYRP4Q96LB8 373 aa11.81□□□□□ -0.52
SSBP3-201ENST00000326956 LINC00312Q9Y6C7 94 aa11.81□□□□□ -0.52
SSBP3-201ENST00000326956 SH2D7A6NKC9 451 aaPredicted RBP11.81□□□□□ -0.52
SSBP3-201ENST00000326956 ZNF833PQ6ZTB9 187 aa11.81□□□□□ -0.52
SSBP3-201ENST00000326956 RNASE8Q8TDE3 154 aaKnown RBP11.81□□□□□ -0.52
SSBP3-201ENST00000326956 WDFY4Q6ZS81 3184 aa11.81□□□□□ -0.52
SSBP3-201ENST00000326956 IGHV1-46P01743 117 aa11.8□□□□□ -0.52
SSBP3-201ENST00000326956 WT1-ASQ06250 92 aa11.8□□□□□ -0.52
SSBP3-201ENST00000326956 TMEM177Q53S58 311 aa11.8□□□□□ -0.52
SSBP3-201ENST00000326956 KIR3DL3Q8N743 410 aa11.8□□□□□ -0.52
SSBP3-201ENST00000326956 TMEM191AQ9H0A3 160 aa11.8□□□□□ -0.52
SSBP3-201ENST00000326956 WASHC3Q9Y3C0 194 aa11.8□□□□□ -0.52
SSBP3-201ENST00000326956 E7EUB6 86 aa11.8□□□□□ -0.52
SSBP3-201ENST00000326956 M0QZ24 198 aa11.8□□□□□ -0.52
SSBP3-201ENST00000326956 MOSP00540 346 aa11.8□□□□□ -0.52
SSBP3-201ENST00000326956 NBEAP1P0C6P0 100 aa11.8□□□□□ -0.52
SSBP3-201ENST00000326956 ZNF137PP52743 207 aa11.8□□□□□ -0.52
SSBP3-201ENST00000326956 TMEM167AQ8TBQ9 72 aa11.8□□□□□ -0.52
SSBP3-201ENST00000326956 ST20Q9HBF5 79 aa11.8□□□□□ -0.52
SSBP3-201ENST00000326956 ZNF835Q9Y2P0 537 aa11.8□□□□□ -0.52
SSBP3-201ENST00000326956 TIMM8BQ9Y5J9 83 aaPredicted RBP11.8□□□□□ -0.52
SSBP3-201ENST00000326956 NAV3Q8IVL0 2385 aa11.8□□□□□ -0.52
SSBP3-201ENST00000326956 IGLV3-9A0A075B6K5 115 aa11.8□□□□□ -0.52
SSBP3-201ENST00000326956 LINC00574Q9H8X3 128 aa11.8□□□□□ -0.52
SSBP3-201ENST00000326956 SOX21Q9Y651 276 aaPredicted RBP11.8□□□□□ -0.52
SSBP3-201ENST00000326956 A0A1B0GXF2 115 aa11.79□□□□□ -0.52
SSBP3-201ENST00000326956 ETFRF1Q6IPR1 90 aa11.79□□□□□ -0.52
SSBP3-201ENST00000326956 OR4F17Q8NGA8 305 aa11.79□□□□□ -0.52
SSBP3-201ENST00000326956 H1FXQ92522 213 aaKnown RBP11.79□□□□□ -0.52
SSBP3-201ENST00000326956 CHCHD1Q96BP2 118 aaKnown RBP11.79□□□□□ -0.52
SSBP3-201ENST00000326956 SMIM12Q96EX1 92 aa11.79□□□□□ -0.52
SSBP3-201ENST00000326956 DKK4Q9UBT3 224 aa11.79□□□□□ -0.52
SSBP3-201ENST00000326956 H0Y8G0 127 aa11.79□□□□□ -0.52
SSBP3-201ENST00000326956 SYS1-DBNDD2H3BUS1 97 aa11.79□□□□□ -0.52
SSBP3-201ENST00000326956 CCL3L1P16619 93 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms