RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 TTC9CQ8N5M4 171 aa8.48□□□□□ -1.05
SF3B2-201ENST00000322535 NPCDR1Q9BY65 106 aa8.48□□□□□ -1.05
SF3B2-201ENST00000322535 ZNF331Q9NQX6 463 aaPredicted RBP8.48□□□□□ -1.05
SF3B2-201ENST00000322535 IGKV1-27A0A075B6S5 117 aa8.48□□□□□ -1.05
SF3B2-201ENST00000322535 TRGV10A0A0A0MS01 117 aa8.48□□□□□ -1.05
SF3B2-201ENST00000322535 GAGE12JA6NER3 117 aa8.48□□□□□ -1.05
SF3B2-201ENST00000322535 GAGE7O76087 117 aa8.48□□□□□ -1.05
SF3B2-201ENST00000322535 MT-ND6P03923 174 aa8.48□□□□□ -1.05
SF3B2-201ENST00000322535 GAGE12FP0CL80 117 aa8.48□□□□□ -1.05
SF3B2-201ENST00000322535 GAGE12GP0CL81 117 aa8.48□□□□□ -1.05
SF3B2-201ENST00000322535 GAGE12IP0CL82 117 aa8.48□□□□□ -1.05
SF3B2-201ENST00000322535 GRB2P62993 217 aaKnown RBP8.48□□□□□ -1.05
SF3B2-201ENST00000322535 GAGE4Q13068 117 aa8.48□□□□□ -1.05
SF3B2-201ENST00000322535 PDLIM3Q53GG5 364 aaPredicted RBP8.48□□□□□ -1.05
SF3B2-201ENST00000322535 OSR2Q8N2R0 312 aa8.48□□□□□ -1.05
SF3B2-201ENST00000322535 NHLRC2Q8NBF2 726 aa8.48□□□□□ -1.05
SF3B2-201ENST00000322535 NRGNQ92686 78 aa8.48□□□□□ -1.05
SF3B2-201ENST00000322535 TTTY12Q9BZ98 90 aa8.48□□□□□ -1.05
SF3B2-201ENST00000322535 HES4Q9HCC6 221 aa8.48□□□□□ -1.05
SF3B2-201ENST00000322535 OR1A1Q9P1Q5 309 aa8.48□□□□□ -1.05
SF3B2-201ENST00000322535 TRBV20-1A0A075B6N2 111 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 A0A1W2PRE2 83 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 A6NDN8 102 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 SMIM9A6NGZ8 99 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 DHRS3O75911 302 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 PATE4P0C8F1 98 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 MEOX1P50221 254 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 FOXA3P55318 350 aaPredicted RBP8.47□□□□□ -1.05
SF3B2-201ENST00000322535 B3GALT5-AS1P59052 145 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 OR8B8Q15620 311 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 VWC2Q2TAL6 325 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 BORCS8Q96FH0 119 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 PIMREGQ9BSJ6 248 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 V9GYV3 84 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 IGLV3-32A0A0A0MS00 114 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 TRBV9A0A0B4J1U6 114 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 IGKV1-12A0A0C4DH73 117 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 PRSS29PA6NIE9 313 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 SYNGR1O43759 233 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 IGKV1D-12P01611 117 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 AMY1AP04745 511 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 SAMD5Q5TGI4 173 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 PQLC2Q6ZP29 291 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 C3orf56Q8N813 242 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 GGTLC1Q9BX51 225 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 TNFRSF19Q9NS68 423 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 DYSFO75923 2080 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 IGHG1P01857 330 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 CX3CL1P78423 397 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 VGLL1Q99990 258 aa8.47□□□□□ -1.05
SF3B2-201ENST00000322535 YTHDF2Q9Y5A9 579 aaKnown RBP8.47□□□□□ -1.05
SF3B2-201ENST00000322535 SP1P08047 785 aa8.46□□□□□ -1.06
SF3B2-201ENST00000322535 GLRXP35754 106 aa8.46□□□□□ -1.06
SF3B2-201ENST00000322535 ZNF146Q15072 292 aa8.46□□□□□ -1.06
SF3B2-201ENST00000322535 SLC35E4Q6ICL7 350 aa8.46□□□□□ -1.06
SF3B2-201ENST00000322535 GGNQ86UU5 652 aa8.46□□□□□ -1.06
SF3B2-201ENST00000322535 ROS1P08922 2347 aa8.46□□□□□ -1.06
SF3B2-201ENST00000322535 C3orf80F5H4A9 247 aa8.46□□□□□ -1.06
SF3B2-201ENST00000322535 IGKV1-39P01597 117 aa8.46□□□□□ -1.06
SF3B2-201ENST00000322535 IGKV1-5P01602 117 aa8.46□□□□□ -1.06
SF3B2-201ENST00000322535 HLA-DQA1P01909 254 aa8.46□□□□□ -1.06
SF3B2-201ENST00000322535 IGKV1D-39P04432 117 aa8.46□□□□□ -1.06
SF3B2-201ENST00000322535 MFAP2P55001 183 aa8.46□□□□□ -1.06
SF3B2-201ENST00000322535 SLC25A53Q5H9E4 307 aa8.46□□□□□ -1.06
SF3B2-201ENST00000322535 LSM10Q969L4 123 aaKnown RBP8.46□□□□□ -1.06
SF3B2-201ENST00000322535 TMEM147Q9BVK8 224 aa8.46□□□□□ -1.06
SF3B2-201ENST00000322535 TMEM191AQ9H0A3 160 aa8.46□□□□□ -1.06
SF3B2-201ENST00000322535 ICE1Q9Y2F5 2266 aa8.46□□□□□ -1.06
SF3B2-201ENST00000322535 SYS1-DBNDD2H3BUS1 97 aa8.45□□□□□ -1.06
SF3B2-201ENST00000322535 RRHO14718 337 aa8.45□□□□□ -1.06
SF3B2-201ENST00000322535 DHHO43323 396 aa8.45□□□□□ -1.06
SF3B2-201ENST00000322535 CEACAM16Q2WEN9 425 aa8.45□□□□□ -1.06
SF3B2-201ENST00000322535 CENPWQ5EE01 88 aa8.45□□□□□ -1.06
SF3B2-201ENST00000322535 Q6AWC8 147 aa8.45□□□□□ -1.06
SF3B2-201ENST00000322535 SPACA3Q8IXA5 215 aa8.45□□□□□ -1.06
SF3B2-201ENST00000322535 TMEM54Q969K7 222 aa8.45□□□□□ -1.06
SF3B2-201ENST00000322535 ZDHHC16Q969W1 377 aa8.45□□□□□ -1.06
SF3B2-201ENST00000322535 IL36RNQ9UBH0 155 aa8.45□□□□□ -1.06
SF3B2-201ENST00000322535 ZGRF1Q86YA3 2104 aa8.45□□□□□ -1.06
SF3B2-201ENST00000322535 TUSC2O75896 110 aa8.45□□□□□ -1.06
SF3B2-201ENST00000322535 LEPROTL1O95214 131 aa8.45□□□□□ -1.06
SF3B2-201ENST00000322535 PPIFP30405 207 aaKnown RBP8.45□□□□□ -1.06
SF3B2-201ENST00000322535 MFAP4P55083 255 aa8.45□□□□□ -1.06
SF3B2-201ENST00000322535 FAM173AQ9BQD7 235 aa8.45□□□□□ -1.06
SF3B2-201ENST00000322535 LSM4Q9Y4Z0 139 aaKnown RBP8.45□□□□□ -1.06
SF3B2-201ENST00000322535 INSIG2Q9Y5U4 225 aa8.45□□□□□ -1.06
SF3B2-201ENST00000322535 TRAV9-1A0A075B6T8 112 aa8.44□□□□□ -1.06
SF3B2-201ENST00000322535 ZNF138P52744 262 aa8.44□□□□□ -1.06
SF3B2-201ENST00000322535 MOB1BQ7L9L4 216 aa8.44□□□□□ -1.06
SF3B2-201ENST00000322535 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.44□□□□□ -1.06
SF3B2-201ENST00000322535 KIR2DL4Q99706 377 aa8.44□□□□□ -1.06
SF3B2-201ENST00000322535 TIMM9Q9Y5J7 89 aa8.44□□□□□ -1.06
SF3B2-201ENST00000322535 LOC107984640A0A0U1RRK4 108 aa8.44□□□□□ -1.06
SF3B2-201ENST00000322535 FOXH1O75593 365 aa8.44□□□□□ -1.06
SF3B2-201ENST00000322535 IGHMP01871 453 aa8.44□□□□□ -1.06
SF3B2-201ENST00000322535 CCL1P22362 96 aa8.44□□□□□ -1.06
SF3B2-201ENST00000322535 KIR2DL2P43627 348 aaPredicted RBP8.44□□□□□ -1.06
SF3B2-201ENST00000322535 GATA4P43694 442 aa8.44□□□□□ -1.06
SF3B2-201ENST00000322535 FOXG1P55316 489 aaPredicted RBP8.44□□□□□ -1.06
SF3B2-201ENST00000322535 GCSAMQ8N6F7 178 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms