RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 IGKV3-15P01624 115 aa10.45□□□□□ -0.74
DNMT3A-202ENST00000321117 PRSS1P07477 247 aa10.45□□□□□ -0.74
DNMT3A-202ENST00000321117 RASL11AQ6T310 242 aa10.45□□□□□ -0.74
DNMT3A-202ENST00000321117 Q6ZR03 302 aa10.45□□□□□ -0.74
DNMT3A-202ENST00000321117 TRBV20OR9-2A0A075B6H5 130 aa10.45□□□□□ -0.74
DNMT3A-202ENST00000321117 SPAARA0A1B0GVQ0 90 aa10.45□□□□□ -0.74
DNMT3A-202ENST00000321117 FNDC10F2Z333 226 aa10.45□□□□□ -0.74
DNMT3A-202ENST00000321117 TSPOP30536 169 aa10.45□□□□□ -0.74
DNMT3A-202ENST00000321117 FBLN7Q53RD9 439 aa10.45□□□□□ -0.74
DNMT3A-202ENST00000321117 PNKDQ8N490 385 aa10.45□□□□□ -0.74
DNMT3A-202ENST00000321117 NUP35Q8NFH5 326 aa10.45□□□□□ -0.74
DNMT3A-202ENST00000321117 K7EN84 100 aa10.45□□□□□ -0.74
DNMT3A-202ENST00000321117 GFRALQ6UXV0 394 aa10.45□□□□□ -0.74
DNMT3A-202ENST00000321117 CLEC7AQ9BXN2 247 aa10.45□□□□□ -0.74
DNMT3A-202ENST00000321117 TMEM14BQ9NUH8 114 aa10.45□□□□□ -0.74
DNMT3A-202ENST00000321117 C15orf65H3BRN8 121 aa10.44□□□□□ -0.74
DNMT3A-202ENST00000321117 C10orf55Q5SWW7 151 aa10.44□□□□□ -0.74
DNMT3A-202ENST00000321117 RIF1Q5UIP0 2472 aaKnown RBP10.44□□□□□ -0.74
DNMT3A-202ENST00000321117 NCBP2LA6PVI3 153 aaKnown RBP10.44□□□□□ -0.74
DNMT3A-202ENST00000321117 ZNF785A8K8V0 405 aa10.44□□□□□ -0.74
DNMT3A-202ENST00000321117 IGLC2P0DOY2 106 aa10.44□□□□□ -0.74
DNMT3A-202ENST00000321117 IGLC3P0DOY3 106 aa10.44□□□□□ -0.74
DNMT3A-202ENST00000321117 PRR31Q5SQ13 230 aa10.44□□□□□ -0.74
DNMT3A-202ENST00000321117 FMC1Q96HJ9 113 aa10.44□□□□□ -0.74
DNMT3A-202ENST00000321117 A0A1B0GUT8 65 aa10.44□□□□□ -0.74
DNMT3A-202ENST00000321117 NMUP48645 174 aa10.44□□□□□ -0.74
DNMT3A-202ENST00000321117 ARF6P62330 175 aa10.44□□□□□ -0.74
DNMT3A-202ENST00000321117 TDRG1Q3Y452 100 aa10.44□□□□□ -0.74
DNMT3A-202ENST00000321117 ATP5L2Q7Z4Y8 100 aa10.44□□□□□ -0.74
DNMT3A-202ENST00000321117 Q9H3A6 140 aa10.44□□□□□ -0.74
DNMT3A-202ENST00000321117 C18orf32Q8TCD1 76 aa10.44□□□□□ -0.74
DNMT3A-202ENST00000321117 CACNA1HO95180 2353 aa10.43□□□□□ -0.74
DNMT3A-202ENST00000321117 MED13Q9UHV7 2174 aa10.43□□□□□ -0.74
DNMT3A-202ENST00000321117 TMEM189A5PLL7 270 aa10.43□□□□□ -0.74
DNMT3A-202ENST00000321117 GGTLC3B5MD39 225 aa10.43□□□□□ -0.74
DNMT3A-202ENST00000321117 KLK10O43240 276 aa10.43□□□□□ -0.74
DNMT3A-202ENST00000321117 RPL24P83731 157 aaKnown RBP10.43□□□□□ -0.74
DNMT3A-202ENST00000321117 GAGE1Q13065 139 aa10.43□□□□□ -0.74
DNMT3A-202ENST00000321117 NEUROG1Q92886 237 aa10.43□□□□□ -0.74
DNMT3A-202ENST00000321117 A0A0C4DFX4 3053 aa10.43□□□□□ -0.74
DNMT3A-202ENST00000321117 IGKV1-16P04430 117 aa10.43□□□□□ -0.74
DNMT3A-202ENST00000321117 RNASE2P10153 161 aaKnown RBP10.43□□□□□ -0.74
DNMT3A-202ENST00000321117 MEF2CQ06413 473 aaPredicted RBP10.43□□□□□ -0.74
DNMT3A-202ENST00000321117 PMCHL2Q9BQD1 86 aa10.43□□□□□ -0.74
DNMT3A-202ENST00000321117 THYN1Q9P016 225 aa10.43□□□□□ -0.74
DNMT3A-202ENST00000321117 PLCE1Q9P212 2302 aa10.43□□□□□ -0.74
DNMT3A-202ENST00000321117 SNAI2O43623 268 aa10.43□□□□□ -0.74
DNMT3A-202ENST00000321117 APOHP02749 345 aaPredicted RBP10.43□□□□□ -0.74
DNMT3A-202ENST00000321117 ORM1P02763 201 aa10.43□□□□□ -0.74
DNMT3A-202ENST00000321117 PEF1Q9UBV8 284 aaKnown RBP10.43□□□□□ -0.74
DNMT3A-202ENST00000321117 A0A1W2PRD5 423 aa10.42□□□□□ -0.74
DNMT3A-202ENST00000321117 A0A1W2PRF3 423 aa10.42□□□□□ -0.74
DNMT3A-202ENST00000321117 A0A1W2PRM7 423 aa10.42□□□□□ -0.74
DNMT3A-202ENST00000321117 TMPRSS3P57727 454 aa10.42□□□□□ -0.74
DNMT3A-202ENST00000321117 FAM27E3Q08E93 113 aa10.42□□□□□ -0.74
DNMT3A-202ENST00000321117 ORAOV1Q8WV07 137 aa10.42□□□□□ -0.74
DNMT3A-202ENST00000321117 COL25A1Q9BXS0 654 aaPredicted RBP10.42□□□□□ -0.74
DNMT3A-202ENST00000321117 ST20Q9HBF5 79 aa10.42□□□□□ -0.74
DNMT3A-202ENST00000321117 TMEM97Q5BJF2 176 aa10.42□□□□□ -0.74
DNMT3A-202ENST00000321117 C5orf30Q96GV9 206 aa10.42□□□□□ -0.74
DNMT3A-202ENST00000321117 ZNF71Q9NQZ8 489 aaPredicted RBP10.42□□□□□ -0.74
DNMT3A-202ENST00000321117 PLSCR4Q9NRQ2 329 aa10.42□□□□□ -0.74
DNMT3A-202ENST00000321117 TNCP24821 2201 aa10.42□□□□□ -0.74
DNMT3A-202ENST00000321117 KMT2EQ8IZD2 1858 aa10.42□□□□□ -0.74
DNMT3A-202ENST00000321117 COMPP49747 757 aaPredicted RBP10.42□□□□□ -0.74
DNMT3A-202ENST00000321117 ZNF134P52741 427 aa10.42□□□□□ -0.74
DNMT3A-202ENST00000321117 OR4A5Q8NH83 315 aa10.42□□□□□ -0.74
DNMT3A-202ENST00000321117 LOXL4Q96JB6 756 aa10.42□□□□□ -0.74
DNMT3A-202ENST00000321117 RCHY1Q96PM5 261 aa10.42□□□□□ -0.74
DNMT3A-202ENST00000321117 ITGB1BP1O14713 200 aa10.41□□□□□ -0.74
DNMT3A-202ENST00000321117 CD40P25942 277 aa10.41□□□□□ -0.74
DNMT3A-202ENST00000321117 CKS2P33552 79 aa10.41□□□□□ -0.74
DNMT3A-202ENST00000321117 SAPCD1Q5SSQ6 148 aa10.41□□□□□ -0.74
DNMT3A-202ENST00000321117 ACACAQ13085 2346 aa10.41□□□□□ -0.74
DNMT3A-202ENST00000321117 A0A1B0GWJ7 208 aa10.41□□□□□ -0.74
DNMT3A-202ENST00000321117 FCGR2BP31994 310 aaPredicted RBP10.41□□□□□ -0.74
DNMT3A-202ENST00000321117 CEACAM3P40198 252 aa10.41□□□□□ -0.74
DNMT3A-202ENST00000321117 PRR20EP86478 221 aa10.41□□□□□ -0.74
DNMT3A-202ENST00000321117 PRR20CP86479 221 aa10.41□□□□□ -0.74
DNMT3A-202ENST00000321117 PRR20DP86480 221 aa10.41□□□□□ -0.74
DNMT3A-202ENST00000321117 PRR20BP86481 221 aa10.41□□□□□ -0.74
DNMT3A-202ENST00000321117 PRR20AP86496 221 aa10.41□□□□□ -0.74
DNMT3A-202ENST00000321117 C11orf53Q8IXP5 236 aa10.41□□□□□ -0.74
DNMT3A-202ENST00000321117 LSM4Q9Y4Z0 139 aaKnown RBP10.41□□□□□ -0.74
DNMT3A-202ENST00000321117 SP9P0CG40 484 aa10.41□□□□□ -0.74
DNMT3A-202ENST00000321117 UBE2V1Q13404 147 aa10.41□□□□□ -0.74
DNMT3A-202ENST00000321117 DAZAP2Q15038 168 aaPredicted RBP10.41□□□□□ -0.74
DNMT3A-202ENST00000321117 CHCHD1Q96BP2 118 aaKnown RBP10.41□□□□□ -0.74
DNMT3A-202ENST00000321117 MRPS16Q9Y3D3 137 aaKnown RBP10.41□□□□□ -0.74
DNMT3A-202ENST00000321117 ATG2AQ2TAZ0 1938 aa10.41□□□□□ -0.74
DNMT3A-202ENST00000321117 SLAQ13239 276 aa10.41□□□□□ -0.74
DNMT3A-202ENST00000321117 LHFPL4Q7Z7J7 247 aa10.41□□□□□ -0.74
DNMT3A-202ENST00000321117 IGHV1-46P01743 117 aa10.4□□□□□ -0.74
DNMT3A-202ENST00000321117 RAB37Q96AX2 223 aa10.4□□□□□ -0.74
DNMT3A-202ENST00000321117 SLC25A15Q9Y619 301 aa10.4□□□□□ -0.74
DNMT3A-202ENST00000321117 IGHV1-69-2A0A0G2JMI3 117 aa10.4□□□□□ -0.74
DNMT3A-202ENST00000321117 GUCD1Q96NT3 240 aa10.4□□□□□ -0.74
DNMT3A-202ENST00000321117 P0C879 139 aa10.4□□□□□ -0.75
DNMT3A-202ENST00000321117 TWIST1Q15672 202 aa10.4□□□□□ -0.75
DNMT3A-202ENST00000321117 MPV17L2Q567V2 206 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms