RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 TMEM30BQ3MIR4 351 aa16.72■□□□□ 0.27
CPNE7-202ENST00000319518 ZNF355PQ9NSJ1 428 aa16.72■□□□□ 0.27
CPNE7-202ENST00000319518 ATRXP46100 2492 aa16.72■□□□□ 0.27
CPNE7-202ENST00000319518 POLEQ07864 2286 aa16.72■□□□□ 0.27
CPNE7-202ENST00000319518 PMCHP20382 165 aa16.72■□□□□ 0.27
CPNE7-202ENST00000319518 TRAV34A0A0B4J273 112 aa16.71■□□□□ 0.27
CPNE7-202ENST00000319518 DIRC3C9JPN6 131 aa16.71■□□□□ 0.27
CPNE7-202ENST00000319518 CTRLP40313 264 aa16.71■□□□□ 0.27
CPNE7-202ENST00000319518 TMEM177Q53S58 311 aa16.71■□□□□ 0.27
CPNE7-202ENST00000319518 NIT1Q86X76 327 aa16.71■□□□□ 0.27
CPNE7-202ENST00000319518 MBD6Q96DN6 1003 aa16.71■□□□□ 0.27
CPNE7-202ENST00000319518 ZNF586Q9NXT0 402 aa16.71■□□□□ 0.27
CPNE7-202ENST00000319518 PLXNB1O43157 2135 aa16.71■□□□□ 0.27
CPNE7-202ENST00000319518 IZUMO1RA6ND01 250 aa16.71■□□□□ 0.27
CPNE7-202ENST00000319518 HLA-DQA1P01909 254 aa16.71■□□□□ 0.27
CPNE7-202ENST00000319518 ZNF25P17030 456 aaPredicted RBP16.71■□□□□ 0.27
CPNE7-202ENST00000319518 GDF5OSQ5U4N7 250 aa16.71■□□□□ 0.27
CPNE7-202ENST00000319518 RUSC1-AS1Q66K80 236 aa16.71■□□□□ 0.27
CPNE7-202ENST00000319518 NBASA2RRP1 2371 aa16.7■□□□□ 0.26
CPNE7-202ENST00000319518 C17orf100A8MU93 164 aa16.7■□□□□ 0.26
CPNE7-202ENST00000319518 INS-IGF2F8WCM5 200 aa16.7■□□□□ 0.26
CPNE7-202ENST00000319518 ERHP84090 104 aaKnown RBP16.7■□□□□ 0.26
CPNE7-202ENST00000319518 MRPL52Q86TS9 123 aaKnown RBP16.7■□□□□ 0.26
CPNE7-202ENST00000319518 ZNF329Q86UD4 541 aa16.7■□□□□ 0.26
CPNE7-202ENST00000319518 FAM19A2Q8N3H0 131 aa16.7■□□□□ 0.26
CPNE7-202ENST00000319518 NPIPB3Q92617 1050 aa16.7■□□□□ 0.26
CPNE7-202ENST00000319518 AMMECR1Q9Y4X0 333 aaPredicted RBP16.7■□□□□ 0.26
CPNE7-202ENST00000319518 LRBAP50851 2863 aa16.7■□□□□ 0.26
CPNE7-202ENST00000319518 M0QZK8 103 aa16.7■□□□□ 0.26
CPNE7-202ENST00000319518 ZNF324O75467 553 aaPredicted RBP16.7■□□□□ 0.26
CPNE7-202ENST00000319518 APOA2P02652 100 aa16.7■□□□□ 0.26
CPNE7-202ENST00000319518 COX19Q49B96 90 aa16.7■□□□□ 0.26
CPNE7-202ENST00000319518 TMEM200BQ69YZ2 307 aa16.7■□□□□ 0.26
CPNE7-202ENST00000319518 IGLV2-23P01705 113 aa16.69■□□□□ 0.26
CPNE7-202ENST00000319518 FOSL1P15407 271 aa16.69■□□□□ 0.26
CPNE7-202ENST00000319518 FLYWCH2Q96CP2 140 aaKnown RBP16.69■□□□□ 0.26
CPNE7-202ENST00000319518 RNF2Q99496 336 aa16.69■□□□□ 0.26
CPNE7-202ENST00000319518 APCSP02743 223 aa16.69■□□□□ 0.26
CPNE7-202ENST00000319518 RPLP1P05386 114 aaKnown RBP16.69■□□□□ 0.26
CPNE7-202ENST00000319518 RPL19P84098 196 aaKnown RBP16.69■□□□□ 0.26
CPNE7-202ENST00000319518 TMEM167AQ8TBQ9 72 aa16.69■□□□□ 0.26
CPNE7-202ENST00000319518 TSKUQ8WUA8 353 aa16.69■□□□□ 0.26
CPNE7-202ENST00000319518 FXYD5Q96DB9 178 aa16.69■□□□□ 0.26
CPNE7-202ENST00000319518 PAXXQ9BUH6 204 aa16.69■□□□□ 0.26
CPNE7-202ENST00000319518 GAL3ST2Q9H3Q3 398 aa16.69■□□□□ 0.26
CPNE7-202ENST00000319518 COX7A2P2O60397 106 aa16.68■□□□□ 0.26
CPNE7-202ENST00000319518 USF1P22415 310 aaPredicted RBP16.68■□□□□ 0.26
CPNE7-202ENST00000319518 ZNF841Q6ZN19 808 aa16.68■□□□□ 0.26
CPNE7-202ENST00000319518 TPSG1Q9NRR2 321 aa16.68■□□□□ 0.26
CPNE7-202ENST00000319518 PLAUP00749 431 aa16.68■□□□□ 0.26
CPNE7-202ENST00000319518 C3orf79P0CE67 100 aa16.68■□□□□ 0.26
CPNE7-202ENST00000319518 C10orf113Q5VZT2 155 aa16.68■□□□□ 0.26
CPNE7-202ENST00000319518 C18orf32Q8TCD1 76 aa16.68■□□□□ 0.26
CPNE7-202ENST00000319518 RITA1Q96K30 269 aa16.68■□□□□ 0.26
CPNE7-202ENST00000319518 TMEM208Q9BTX3 173 aa16.68■□□□□ 0.26
CPNE7-202ENST00000319518 ZNF430Q9H8G1 570 aaPredicted RBP16.68■□□□□ 0.26
CPNE7-202ENST00000319518 PEX7O00628 323 aa16.67■□□□□ 0.26
CPNE7-202ENST00000319518 NUDT10Q8NFP7 164 aa16.67■□□□□ 0.26
CPNE7-202ENST00000319518 OR4B1Q8NGF8 309 aa16.67■□□□□ 0.26
CPNE7-202ENST00000319518 NUDT11Q96G61 164 aa16.67■□□□□ 0.26
CPNE7-202ENST00000319518 C7orf69Q9H7B7 122 aa16.67■□□□□ 0.26
CPNE7-202ENST00000319518 TCRBV4S1A1TA0A5B7 111 aa16.67■□□□□ 0.26
CPNE7-202ENST00000319518 VWC2LB2RUY7 222 aa16.67■□□□□ 0.26
CPNE7-202ENST00000319518 GNG5P63218 68 aa16.67■□□□□ 0.26
CPNE7-202ENST00000319518 RBPJQ06330 500 aa16.67■□□□□ 0.26
CPNE7-202ENST00000319518 MEF2CQ06413 473 aaPredicted RBP16.67■□□□□ 0.26
CPNE7-202ENST00000319518 MRGPRG-AS1Q2M3A8 158 aa16.67■□□□□ 0.26
CPNE7-202ENST00000319518 FAM231DQ6ZW35 169 aa16.67■□□□□ 0.26
CPNE7-202ENST00000319518 LHFPL4Q7Z7J7 247 aa16.67■□□□□ 0.26
CPNE7-202ENST00000319518 NUP35Q8NFH5 326 aa16.67■□□□□ 0.26
CPNE7-202ENST00000319518 OR4C13Q8NGP0 309 aa16.67■□□□□ 0.26
CPNE7-202ENST00000319518 CCL17Q92583 94 aa16.67■□□□□ 0.26
CPNE7-202ENST00000319518 NKX6-3A6NJ46 265 aa16.66■□□□□ 0.26
CPNE7-202ENST00000319518 WIPF2Q8TF74 440 aaPredicted RBP16.66■□□□□ 0.26
CPNE7-202ENST00000319518 SAP30LQ9HAJ7 183 aa16.66■□□□□ 0.26
CPNE7-202ENST00000319518 A0A1W2PN81 502 aa16.66■□□□□ 0.26
CPNE7-202ENST00000319518 SHISA9B4DS77 424 aa16.66■□□□□ 0.26
CPNE7-202ENST00000319518 REG1AP05451 166 aa16.66■□□□□ 0.26
CPNE7-202ENST00000319518 GRNP28799 593 aaKnown RBP16.66■□□□□ 0.26
CPNE7-202ENST00000319518 MYCNOSP40205 109 aa16.66■□□□□ 0.26
CPNE7-202ENST00000319518 ST6GALNAC6Q969X2 333 aa16.66■□□□□ 0.26
CPNE7-202ENST00000319518 LPAR2Q9HBW0 351 aa16.66■□□□□ 0.26
CPNE7-202ENST00000319518 E7EQL1 145 aa16.65■□□□□ 0.26
CPNE7-202ENST00000319518 CORTO00230 105 aa16.65■□□□□ 0.26
CPNE7-202ENST00000319518 TNFRSF1AP19438 455 aa16.65■□□□□ 0.26
CPNE7-202ENST00000319518 MFAP2P55001 183 aa16.65■□□□□ 0.26
CPNE7-202ENST00000319518 SPATA45Q537H7 98 aa16.65■□□□□ 0.26
CPNE7-202ENST00000319518 LYPD2Q6UXB3 125 aa16.65■□□□□ 0.26
CPNE7-202ENST00000319518 THAP8Q8NA92 274 aa16.65■□□□□ 0.26
CPNE7-202ENST00000319518 TMEM68Q96MH6 324 aa16.65■□□□□ 0.26
CPNE7-202ENST00000319518 ZNF331Q9NQX6 463 aaPredicted RBP16.65■□□□□ 0.26
CPNE7-202ENST00000319518 DCHS2Q6V1P9 2916 aa16.65■□□□□ 0.26
CPNE7-202ENST00000319518 FAM90A27PA6NNH2 459 aa16.65■□□□□ 0.26
CPNE7-202ENST00000319518 C22orf46C9J442 243 aa16.65■□□□□ 0.26
CPNE7-202ENST00000319518 PRRX1P54821 245 aa16.65■□□□□ 0.26
CPNE7-202ENST00000319518 BATFQ16520 125 aa16.65■□□□□ 0.26
CPNE7-202ENST00000319518 VKORC1Q9BQB6 163 aa16.65■□□□□ 0.26
CPNE7-202ENST00000319518 A0A1W2PPI3 338 aa16.64■□□□□ 0.25
CPNE7-202ENST00000319518 PRR31Q5SQ13 230 aa16.64■□□□□ 0.25
CPNE7-202ENST00000319518 CYB5R2Q6BCY4 276 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms