RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 C11orf44Q8N8P7 122 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 ZNF257Q9Y2Q1 563 aa7.56□□□□□ -1.2
TMEM39A-201ENST00000319172 SCGB1D1O95968 90 aa7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 IGHV3-11P01762 117 aa7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 ORM1P02763 201 aa7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 AREGP15514 252 aa7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 COL8A1P27658 744 aa7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 FAM3BP58499 235 aaPredicted RBP7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 NCKAP5O14513 1909 aa7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 COL6A3P12111 3177 aa7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 CGB1A6NKQ9 187 aa7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 B4DEV8 164 aa7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 FCN1O00602 326 aa7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 GGTLC1Q9BX51 225 aa7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 GSX1Q9H4S2 264 aaPredicted RBP7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 VPS13AQ96RL7 3174 aa7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 IGHV3OR16-12A0A075B7B8 117 aa7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 HIST1H1BP16401 226 aaKnown RBP7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 ITLN2Q8WWU7 325 aaPredicted RBP7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 SIGLEC9Q9Y336 463 aa7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 ELOA3CA0A087WX78 387 aaPredicted RBP7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 ITGB1BP1O14713 200 aa7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 SAA4P35542 130 aa7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 ATP5G2Q06055 141 aa7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 IL15RAQ13261 267 aa7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 FAM106AQ4KMX7 169 aa7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 OR4B1Q8NGF8 309 aa7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 DUX5Q96PT3 197 aa7.55□□□□□ -1.2
TMEM39A-201ENST00000319172 LAMA1P25391 3075 aa7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 TRAV34A0A0B4J273 112 aa7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 OR2T8A6NH00 312 aa7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 M0R1W7 72 aa7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 BMPR1BO00238 502 aa7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 RPEL1Q2QD12 228 aa7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 TMEM177Q53S58 311 aa7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 KLF2Q9Y5W3 355 aaPredicted RBP7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 PLXNB1O43157 2135 aa7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 ZNF343Q6P1L6 599 aa7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 CLEC19AQ6UXS0 136 aa7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 UFC1Q9Y3C8 167 aa7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 TRAV30A0A087WSZ9 112 aa7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 SCO2A0A1W2PP80 73 aa7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 SRRM4A7MD48 611 aaKnown RBP7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 P01737 135 aa7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 AMY1AP04745 511 aa7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 NBEAP1P0C6P0 100 aa7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 CX3CL1P78423 397 aa7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 ICAM4Q14773 271 aa7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 SPATA31B1PQ5VZV4 182 aa7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 ANAPC16Q96DE5 110 aa7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 TPSG1Q9NRR2 321 aa7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 KAAG1Q9UBP8 84 aa7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 DYSFO75923 2080 aa7.54□□□□□ -1.2
TMEM39A-201ENST00000319172 A0A1W2PRX2 142 aa7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 TGOLN2O43493 480 aa7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 PYYP10082 97 aa7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 GPX4P36969 197 aaPredicted RBP7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 RUSC1-AS1Q66K80 236 aa7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 METTL26Q96S19 204 aa7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 MGST2Q99735 147 aa7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 TRAV5A0A0B4J249 113 aa7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 J3QKU1 62 aa7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 DEFA6Q01524 100 aa7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 C5orf64Q2M2E5 130 aa7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 TM4SF20Q53R12 229 aa7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 DMRTC2Q8IXT2 367 aaPredicted RBP7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 EIF4E3Q8N5X7 224 aaKnown RBP7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 NRGNQ92686 78 aa7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 C16orf92Q96LL3 132 aa7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 TXNDC17Q9BRA2 123 aa7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 C19orf24Q9BVV8 132 aa7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 C2CD3Q4AC94 2353 aa7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 TMEM250H0YL14 139 aa7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 NPFFO15130 113 aa7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 MAS1LP35410 378 aa7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 RPL29P47914 159 aaKnown RBP7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 C2orf83Q53S99 150 aa7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 OR5AN1Q8NGI8 311 aa7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 MRPL32Q9BYC8 188 aaKnown RBP7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 SEPSECSQ9HD40 501 aaKnown RBP7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 NIT2Q9NQR4 276 aa7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 EXPH5Q8NEV8 1989 aa7.53□□□□□ -1.2
TMEM39A-201ENST00000319172 A0A1W2PPI3 338 aa7.52□□□□□ -1.2
TMEM39A-201ENST00000319172 B4DSR2 109 aa7.52□□□□□ -1.2
TMEM39A-201ENST00000319172 H3BUX3 64 aa7.52□□□□□ -1.2
TMEM39A-201ENST00000319172 VENTXO95231 258 aa7.52□□□□□ -1.2
TMEM39A-201ENST00000319172 IGHV2-70P01814 119 aa7.52□□□□□ -1.2
TMEM39A-201ENST00000319172 IER3P46695 156 aa7.52□□□□□ -1.2
TMEM39A-201ENST00000319172 C19orf35Q6ZS72 473 aa7.52□□□□□ -1.2
TMEM39A-201ENST00000319172 GOLT1AQ6ZVE7 132 aa7.52□□□□□ -1.2
TMEM39A-201ENST00000319172 EEF1AKMT3Q96AZ1 226 aa7.52□□□□□ -1.2
TMEM39A-201ENST00000319172 C12orf57Q99622 126 aa7.52□□□□□ -1.2
TMEM39A-201ENST00000319172 REG4Q9BYZ8 158 aa7.52□□□□□ -1.2
TMEM39A-201ENST00000319172 PRORYQ9H606 182 aa7.52□□□□□ -1.2
TMEM39A-201ENST00000319172 CARHSP1Q9Y2V2 147 aaKnown RBP7.52□□□□□ -1.2
TMEM39A-201ENST00000319172 A0A1W2PS18 150 aa7.52□□□□□ -1.21
TMEM39A-201ENST00000319172 M0QZK8 103 aa7.52□□□□□ -1.21
TMEM39A-201ENST00000319172 RHOGP84095 191 aa7.52□□□□□ -1.21
TMEM39A-201ENST00000319172 DGAT2L7PQ6IED9 249 aa7.52□□□□□ -1.21
TMEM39A-201ENST00000319172 ZNF833PQ6ZTB9 187 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms