RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 CACNG8Q8WXS5 425 aa11.9□□□□□ -0.5
PDLIM5-202ENST00000318007 USMG5Q96IX5 58 aa11.9□□□□□ -0.5
PDLIM5-202ENST00000318007 MGST2Q99735 147 aa11.9□□□□□ -0.5
PDLIM5-202ENST00000318007 WDR61Q9GZS3 305 aaKnown RBP11.9□□□□□ -0.5
PDLIM5-202ENST00000318007 TRRAPQ9Y4A5 3859 aa11.9□□□□□ -0.5
PDLIM5-202ENST00000318007 CLN5O75503 358 aa11.9□□□□□ -0.5
PDLIM5-202ENST00000318007 DFFBO76075 338 aa11.9□□□□□ -0.5
PDLIM5-202ENST00000318007 YIF1AO95070 293 aa11.9□□□□□ -0.5
PDLIM5-202ENST00000318007 NPBWR1P48145 328 aa11.9□□□□□ -0.5
PDLIM5-202ENST00000318007 ZNF266Q14584 549 aa11.9□□□□□ -0.5
PDLIM5-202ENST00000318007 TMEM116Q8NCL8 245 aa11.9□□□□□ -0.5
PDLIM5-202ENST00000318007 OR4X1Q8NH49 305 aa11.9□□□□□ -0.5
PDLIM5-202ENST00000318007 SCGB1C1Q8TD33 95 aa11.9□□□□□ -0.5
PDLIM5-202ENST00000318007 VN1R17PQ8TDU5 208 aa11.9□□□□□ -0.5
PDLIM5-202ENST00000318007 STAB1Q9NY15 2570 aa11.9□□□□□ -0.5
PDLIM5-202ENST00000318007 IGKV1D-37A0A075B6S9 117 aa11.89□□□□□ -0.51
PDLIM5-202ENST00000318007 AGPAT2O15120 278 aa11.89□□□□□ -0.51
PDLIM5-202ENST00000318007 IGLC1P0CG04 106 aa11.89□□□□□ -0.51
PDLIM5-202ENST00000318007 ADMP35318 185 aa11.89□□□□□ -0.51
PDLIM5-202ENST00000318007 ARL3P36405 182 aa11.89□□□□□ -0.51
PDLIM5-202ENST00000318007 ATP6V1FQ16864 119 aa11.89□□□□□ -0.51
PDLIM5-202ENST00000318007 NPCDR1Q9BY65 106 aa11.89□□□□□ -0.51
PDLIM5-202ENST00000318007 DOK5Q9P104 306 aa11.89□□□□□ -0.51
PDLIM5-202ENST00000318007 TRBV7-1A0A0A6YYK4 115 aa11.88□□□□□ -0.51
PDLIM5-202ENST00000318007 NUPL2O15504 423 aaKnown RBP11.88□□□□□ -0.51
PDLIM5-202ENST00000318007 EIF3GO75821 320 aaKnown RBP eCLIP11.88□□□□□ -0.51
PDLIM5-202ENST00000318007 OR2C1O95371 312 aa11.88□□□□□ -0.51
PDLIM5-202ENST00000318007 CTSGP08311 255 aa11.88□□□□□ -0.51
PDLIM5-202ENST00000318007 CAMLGP49069 296 aa11.88□□□□□ -0.51
PDLIM5-202ENST00000318007 ELLP55199 621 aaPredicted RBP11.88□□□□□ -0.51
PDLIM5-202ENST00000318007 VWC2Q2TAL6 325 aa11.88□□□□□ -0.51
PDLIM5-202ENST00000318007 MIC13Q5XKP0 118 aa11.88□□□□□ -0.51
PDLIM5-202ENST00000318007 TMEM144Q7Z5S9 345 aa11.88□□□□□ -0.51
PDLIM5-202ENST00000318007 COMMD1Q8N668 190 aa11.88□□□□□ -0.51
PDLIM5-202ENST00000318007 BPIFCQ8NFQ6 507 aa11.88□□□□□ -0.51
PDLIM5-202ENST00000318007 UBE2E2Q96LR5 201 aa11.88□□□□□ -0.51
PDLIM5-202ENST00000318007 PBDC1Q9BVG4 233 aa11.88□□□□□ -0.51
PDLIM5-202ENST00000318007 GGACTQ9BVM4 153 aa11.88□□□□□ -0.51
PDLIM5-202ENST00000318007 WDR83OSQ9Y284 106 aa11.88□□□□□ -0.51
PDLIM5-202ENST00000318007 SELENOKQ9Y6D0 94 aa11.88□□□□□ -0.51
PDLIM5-202ENST00000318007 VWFP04275 2813 aa11.88□□□□□ -0.51
PDLIM5-202ENST00000318007 IGHV4OR15-8A0A075B7B6 117 aa11.88□□□□□ -0.51
PDLIM5-202ENST00000318007 A0A087WW49 117 aa11.88□□□□□ -0.51
PDLIM5-202ENST00000318007 BORCS7-ASMTA0A0B4J1R7 106 aa11.88□□□□□ -0.51
PDLIM5-202ENST00000318007 IGKV1-17P01599 117 aa11.88□□□□□ -0.51
PDLIM5-202ENST00000318007 ATP6V0CP27449 155 aa11.88□□□□□ -0.51
PDLIM5-202ENST00000318007 SLC25A32Q9H2D1 315 aa11.88□□□□□ -0.51
PDLIM5-202ENST00000318007 TMEM89A2RUT3 159 aa11.87□□□□□ -0.51
PDLIM5-202ENST00000318007 TAAR5O14804 337 aa11.87□□□□□ -0.51
PDLIM5-202ENST00000318007 TGOLN2O43493 480 aa11.87□□□□□ -0.51
PDLIM5-202ENST00000318007 ZNF343Q6P1L6 599 aa11.87□□□□□ -0.51
PDLIM5-202ENST00000318007 RNF152Q8N8N0 203 aa11.87□□□□□ -0.51
PDLIM5-202ENST00000318007 OR11H1Q8NG94 326 aa11.87□□□□□ -0.51
PDLIM5-202ENST00000318007 MYOZ3Q8TDC0 251 aa11.87□□□□□ -0.51
PDLIM5-202ENST00000318007 GGTLC1Q9BX51 225 aa11.87□□□□□ -0.51
PDLIM5-202ENST00000318007 PEF1Q9UBV8 284 aaKnown RBP11.87□□□□□ -0.51
PDLIM5-202ENST00000318007 LSM4Q9Y4Z0 139 aaKnown RBP11.87□□□□□ -0.51
PDLIM5-202ENST00000318007 BMPR1BO00238 502 aa11.87□□□□□ -0.51
PDLIM5-202ENST00000318007 ZNF207O43670 478 aaKnown RBP11.87□□□□□ -0.51
PDLIM5-202ENST00000318007 JTBO76095 146 aa11.87□□□□□ -0.51
PDLIM5-202ENST00000318007 LGALS1P09382 135 aaKnown RBP11.87□□□□□ -0.51
PDLIM5-202ENST00000318007 PSG1P11464 419 aa11.87□□□□□ -0.51
PDLIM5-202ENST00000318007 GCSAMLQ5JQS6 135 aa11.87□□□□□ -0.51
PDLIM5-202ENST00000318007 C20orf24Q9BUV8 137 aa11.87□□□□□ -0.51
PDLIM5-202ENST00000318007 TSSC4Q9Y5U2 329 aaPredicted RBP11.87□□□□□ -0.51
PDLIM5-202ENST00000318007 WNK1Q9H4A3 2382 aa11.86□□□□□ -0.51
PDLIM5-202ENST00000318007 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-202ENST00000318007 ZNF320A2RRD8 509 aa11.86□□□□□ -0.51
PDLIM5-202ENST00000318007 I3L521 148 aa11.86□□□□□ -0.51
PDLIM5-202ENST00000318007 CDX1P47902 265 aaPredicted RBP11.86□□□□□ -0.51
PDLIM5-202ENST00000318007 SLURP1P55000 103 aa11.86□□□□□ -0.51
PDLIM5-202ENST00000318007 ZNF616Q08AN1 781 aa11.86□□□□□ -0.51
PDLIM5-202ENST00000318007 KLK9Q2XQG4 91 aa11.86□□□□□ -0.51
PDLIM5-202ENST00000318007 ALKAL2Q6UX46 152 aa11.86□□□□□ -0.51
PDLIM5-202ENST00000318007 ZNF709Q8N972 641 aa11.86□□□□□ -0.51
PDLIM5-202ENST00000318007 TMED6Q8WW62 240 aa11.86□□□□□ -0.51
PDLIM5-202ENST00000318007 ST8SIA2Q92186 375 aa11.86□□□□□ -0.51
PDLIM5-202ENST00000318007 RCC1LQ96I51 464 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-202ENST00000318007 KLK9Q9UKQ9 250 aa11.86□□□□□ -0.51
PDLIM5-202ENST00000318007 PUS1Q9Y606 427 aaKnown RBP eCLIP11.86□□□□□ -0.51
PDLIM5-202ENST00000318007 A0A1B0GUS0 222 aa11.85□□□□□ -0.51
PDLIM5-202ENST00000318007 SCAF4O95104 1147 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-202ENST00000318007 BRI3O95415 125 aa11.85□□□□□ -0.51
PDLIM5-202ENST00000318007 CFDP00746 253 aaPredicted RBP11.85□□□□□ -0.51
PDLIM5-202ENST00000318007 IL4P05112 153 aa11.85□□□□□ -0.51
PDLIM5-202ENST00000318007 TPT1P13693 172 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-202ENST00000318007 ORM2P19652 201 aa11.85□□□□□ -0.51
PDLIM5-202ENST00000318007 LYZP61626 148 aa11.85□□□□□ -0.51
PDLIM5-202ENST00000318007 FAM74A1Q5RGS3 127 aa11.85□□□□□ -0.51
PDLIM5-202ENST00000318007 CYP2G1PQ6ZSU1 146 aa11.85□□□□□ -0.51
PDLIM5-202ENST00000318007 STPG3Q8N7X2 389 aa11.85□□□□□ -0.51
PDLIM5-202ENST00000318007 C4orf3Q8WVX3 66 aa11.85□□□□□ -0.51
PDLIM5-202ENST00000318007 TMEM158Q8WZ71 300 aa11.85□□□□□ -0.51
PDLIM5-202ENST00000318007 PXMP4Q9Y6I8 212 aa11.85□□□□□ -0.51
PDLIM5-202ENST00000318007 IGHV3OR16-13A0A075B7E8 117 aa11.85□□□□□ -0.51
PDLIM5-202ENST00000318007 IGHV3-49A0A0A0MS15 119 aa11.85□□□□□ -0.51
PDLIM5-202ENST00000318007 IGHV3-74A0A0B4J1X5 117 aa11.85□□□□□ -0.51
PDLIM5-202ENST00000318007 ATP6V1G1O75348 118 aa11.85□□□□□ -0.51
PDLIM5-202ENST00000318007 LINC00869P0C866 280 aa11.85□□□□□ -0.51
PDLIM5-202ENST00000318007 RD3LP0DJH9 198 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms