RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 OR8I2Q8N0Y5 310 aa11.02□□□□□ -0.64
ATG4C-201ENST00000317868 IGHV3-72A0A0B4J1Y9 119 aa11.02□□□□□ -0.65
ATG4C-201ENST00000317868 RPL27AP46776 148 aaKnown RBP11.02□□□□□ -0.65
ATG4C-201ENST00000317868 MRPL41Q8IXM3 137 aaKnown RBP11.02□□□□□ -0.65
ATG4C-201ENST00000317868 MUC15Q8N387 334 aa11.02□□□□□ -0.65
ATG4C-201ENST00000317868 DLX1P56177 255 aa11.02□□□□□ -0.65
ATG4C-201ENST00000317868 IBA57Q5T440 356 aaKnown RBP11.02□□□□□ -0.65
ATG4C-201ENST00000317868 TMEM136Q6ZRR5 245 aa11.02□□□□□ -0.65
ATG4C-201ENST00000317868 REC114Q7Z4M0 266 aa11.02□□□□□ -0.65
ATG4C-201ENST00000317868 LINC01560Q8TB33 94 aa11.02□□□□□ -0.65
ATG4C-201ENST00000317868 NOL4LQ96MY1 436 aaPredicted RBP11.02□□□□□ -0.65
ATG4C-201ENST00000317868 RNF5Q99942 180 aa11.02□□□□□ -0.65
ATG4C-201ENST00000317868 A8MWP6 167 aa11.01□□□□□ -0.65
ATG4C-201ENST00000317868 LYNX1G3V0Z9 82 aa11.01□□□□□ -0.65
ATG4C-201ENST00000317868 CORTO00230 105 aa11.01□□□□□ -0.65
ATG4C-201ENST00000317868 MT-ND6P03923 174 aa11.01□□□□□ -0.65
ATG4C-201ENST00000317868 LYNX1P0DP58 116 aa11.01□□□□□ -0.65
ATG4C-201ENST00000317868 GRNP28799 593 aaKnown RBP11.01□□□□□ -0.65
ATG4C-201ENST00000317868 DEFA6Q01524 100 aa11.01□□□□□ -0.65
ATG4C-201ENST00000317868 COX19Q49B96 90 aa11.01□□□□□ -0.65
ATG4C-201ENST00000317868 LINC00305Q7Z4B0 112 aa11.01□□□□□ -0.65
ATG4C-201ENST00000317868 TNFRSF19Q9NS68 423 aa11.01□□□□□ -0.65
ATG4C-201ENST00000317868 F11RQ9Y624 299 aaKnown RBP11.01□□□□□ -0.65
ATG4C-201ENST00000317868 GRIFINA4D1Z8 144 aa11.01□□□□□ -0.65
ATG4C-201ENST00000317868 PEX7O00628 323 aa11.01□□□□□ -0.65
ATG4C-201ENST00000317868 IGHV3-48P01763 117 aa11.01□□□□□ -0.65
ATG4C-201ENST00000317868 MSRB2Q9Y3D2 182 aa11.01□□□□□ -0.65
ATG4C-201ENST00000317868 AMMECR1Q9Y4X0 333 aaPredicted RBP11.01□□□□□ -0.65
ATG4C-201ENST00000317868 IER3P46695 156 aa11□□□□□ -0.65
ATG4C-201ENST00000317868 PPP1R27Q86WC6 154 aa11□□□□□ -0.65
ATG4C-201ENST00000317868 STXBP6Q8NFX7 210 aa11□□□□□ -0.65
ATG4C-201ENST00000317868 PRO1933Q9H354 126 aa11□□□□□ -0.65
ATG4C-201ENST00000317868 KLF12Q9Y4X4 402 aa11□□□□□ -0.65
ATG4C-201ENST00000317868 SNURFLB1AK76 121 aa11□□□□□ -0.65
ATG4C-201ENST00000317868 ENSAO43768 121 aaKnown RBP11□□□□□ -0.65
ATG4C-201ENST00000317868 GP9P14770 177 aa11□□□□□ -0.65
ATG4C-201ENST00000317868 FXYD3Q14802 87 aa11□□□□□ -0.65
ATG4C-201ENST00000317868 TNXAQ16473 311 aa11□□□□□ -0.65
ATG4C-201ENST00000317868 IQCJQ1A5X6 159 aa11□□□□□ -0.65
ATG4C-201ENST00000317868 WDR73Q6P4I2 378 aa11□□□□□ -0.65
ATG4C-201ENST00000317868 CMTM2Q8TAZ6 248 aa11□□□□□ -0.65
ATG4C-201ENST00000317868 WIPF2Q8TF74 440 aaPredicted RBP11□□□□□ -0.65
ATG4C-201ENST00000317868 SMIM12Q96EX1 92 aa11□□□□□ -0.65
ATG4C-201ENST00000317868 PERPQ96FX8 193 aa11□□□□□ -0.65
ATG4C-201ENST00000317868 PPIAL4CA0A0B4J2A2 164 aa10.99□□□□□ -0.65
ATG4C-201ENST00000317868 MOSP00540 346 aa10.99□□□□□ -0.65
ATG4C-201ENST00000317868 PPIAL4GP0DN37 164 aa10.99□□□□□ -0.65
ATG4C-201ENST00000317868 TMEM183BQ1AE95 376 aa10.99□□□□□ -0.65
ATG4C-201ENST00000317868 LDLRAD2Q5SZI1 272 aa10.99□□□□□ -0.65
ATG4C-201ENST00000317868 HCP5Q6MZN7 132 aa10.99□□□□□ -0.65
ATG4C-201ENST00000317868 C19orf35Q6ZS72 473 aa10.99□□□□□ -0.65
ATG4C-201ENST00000317868 LINC00479Q96M42 142 aa10.99□□□□□ -0.65
ATG4C-201ENST00000317868 SRSF8Q9BRL6 282 aaKnown RBP10.99□□□□□ -0.65
ATG4C-201ENST00000317868 INSIG2Q9Y5U4 225 aa10.99□□□□□ -0.65
ATG4C-201ENST00000317868 FCN1O00602 326 aa10.99□□□□□ -0.65
ATG4C-201ENST00000317868 CRISP2P16562 243 aa10.99□□□□□ -0.65
ATG4C-201ENST00000317868 PAFAH1B2P68402 229 aa10.99□□□□□ -0.65
ATG4C-201ENST00000317868 HRNRQ86YZ3 2850 aaPredicted RBP10.99□□□□□ -0.65
ATG4C-201ENST00000317868 MISP3Q96FF7 219 aa10.98□□□□□ -0.65
ATG4C-201ENST00000317868 IZUMO1RA6ND01 250 aa10.98□□□□□ -0.65
ATG4C-201ENST00000317868 I3L2K1 104 aa10.98□□□□□ -0.65
ATG4C-201ENST00000317868 SERF1AO75920 110 aa10.98□□□□□ -0.65
ATG4C-201ENST00000317868 CDSNQ15517 529 aa10.98□□□□□ -0.65
ATG4C-201ENST00000317868 RASL11AQ6T310 242 aa10.98□□□□□ -0.65
ATG4C-201ENST00000317868 AMY1AP04745 511 aa10.98□□□□□ -0.65
ATG4C-201ENST00000317868 ADORA2A-AS1P86434 159 aa10.98□□□□□ -0.65
ATG4C-201ENST00000317868 OR10J3Q5JRS4 329 aa10.98□□□□□ -0.65
ATG4C-201ENST00000317868 C11orf71Q6IPW1 123 aa10.98□□□□□ -0.65
ATG4C-201ENST00000317868 TLN1Q9Y490 2541 aaKnown RBP10.97□□□□□ -0.65
ATG4C-201ENST00000317868 MAP1BP46821 2468 aaKnown RBP10.97□□□□□ -0.65
ATG4C-201ENST00000317868 KIR2DL5BA0A0G2JN68 375 aa10.97□□□□□ -0.65
ATG4C-201ENST00000317868 KIR2DL5BA0A0G2JPC4 375 aa10.97□□□□□ -0.65
ATG4C-201ENST00000317868 FAM90A27PA6NNH2 459 aa10.97□□□□□ -0.65
ATG4C-201ENST00000317868 F2Z2F3 143 aa10.97□□□□□ -0.65
ATG4C-201ENST00000317868 Q6ZWC4 215 aa10.97□□□□□ -0.65
ATG4C-201ENST00000317868 KIR2DL5AQ8N109 375 aa10.97□□□□□ -0.65
ATG4C-201ENST00000317868 OR11H6Q8NGC7 330 aa10.97□□□□□ -0.65
ATG4C-201ENST00000317868 FAM168AQ92567 244 aa10.97□□□□□ -0.65
ATG4C-201ENST00000317868 MLST8Q9BVC4 326 aa10.97□□□□□ -0.65
ATG4C-201ENST00000317868 IGLC1P0CG04 106 aa10.97□□□□□ -0.65
ATG4C-201ENST00000317868 RANP62826 216 aaKnown RBP10.97□□□□□ -0.65
ATG4C-201ENST00000317868 RPL19P84098 196 aaKnown RBP10.97□□□□□ -0.65
ATG4C-201ENST00000317868 PRB3Q04118 309 aaPredicted RBP10.97□□□□□ -0.65
ATG4C-201ENST00000317868 OR8B3Q8NGG8 313 aa10.97□□□□□ -0.65
ATG4C-201ENST00000317868 SRSF12Q8WXF0 261 aaKnown RBP10.97□□□□□ -0.65
ATG4C-201ENST00000317868 CFHR4Q92496 578 aa10.97□□□□□ -0.65
ATG4C-201ENST00000317868 OR8B2Q96RD0 313 aa10.97□□□□□ -0.65
ATG4C-201ENST00000317868 EPDR1Q9UM22 224 aa10.97□□□□□ -0.65
ATG4C-201ENST00000317868 POLR3KQ9Y2Y1 108 aaPredicted RBP10.97□□□□□ -0.65
ATG4C-201ENST00000317868 HLA-DQA1P01909 254 aa10.96□□□□□ -0.65
ATG4C-201ENST00000317868 TPPP2P59282 170 aa10.96□□□□□ -0.65
ATG4C-201ENST00000317868 OR1B1Q8NGR6 318 aa10.96□□□□□ -0.65
ATG4C-201ENST00000317868 C22orf15Q8WYQ4 148 aa10.96□□□□□ -0.65
ATG4C-201ENST00000317868 NDUFAF3Q9BU61 184 aa10.96□□□□□ -0.65
ATG4C-201ENST00000317868 ZMAT5Q9UDW3 170 aaKnown RBP10.96□□□□□ -0.65
ATG4C-201ENST00000317868 LRBAP50851 2863 aa10.96□□□□□ -0.66
ATG4C-201ENST00000317868 MGST1P10620 155 aaKnown RBP10.96□□□□□ -0.66
ATG4C-201ENST00000317868 NHLRC2Q8NBF2 726 aa10.96□□□□□ -0.66
ATG4C-201ENST00000317868 RPEQ96AT9 228 aa10.96□□□□□ -0.66
ATG4C-201ENST00000317868 GRAMD2BQ96HH9 432 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms