RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 OR1L4Q8NGR5 311 aa8.58□□□□□ -1.04
COL3A1-202ENST00000317840 NEUROG1Q92886 237 aa8.58□□□□□ -1.04
COL3A1-202ENST00000317840 NEU1Q99519 415 aa8.58□□□□□ -1.04
COL3A1-202ENST00000317840 SLC25A33Q9BSK2 321 aa8.58□□□□□ -1.04
COL3A1-202ENST00000317840 UQCR10Q9UDW1 63 aa8.58□□□□□ -1.04
COL3A1-202ENST00000317840 IGKV1OR2-108A0A075B7D4 117 aa8.57□□□□□ -1.04
COL3A1-202ENST00000317840 PGPA6NDG6 321 aa8.57□□□□□ -1.04
COL3A1-202ENST00000317840 C21orf62-AS1Q17RA5 79 aa8.57□□□□□ -1.04
COL3A1-202ENST00000317840 C11orf52Q96A22 123 aa8.57□□□□□ -1.04
COL3A1-202ENST00000317840 CHODLQ9H9P2 273 aa8.57□□□□□ -1.04
COL3A1-202ENST00000317840 CDC42EP3Q9UKI2 254 aa8.57□□□□□ -1.04
COL3A1-202ENST00000317840 TP53TG3Q9ULZ0 132 aa8.57□□□□□ -1.04
COL3A1-202ENST00000317840 ARL2-SNX15V9GYD0 113 aa8.57□□□□□ -1.04
COL3A1-202ENST00000317840 A0A1W2PRE2 83 aa8.57□□□□□ -1.04
COL3A1-202ENST00000317840 ISLRO14498 428 aa8.57□□□□□ -1.04
COL3A1-202ENST00000317840 IGLV1-44P01699 117 aa8.57□□□□□ -1.04
COL3A1-202ENST00000317840 CD3EP07766 207 aa8.57□□□□□ -1.04
COL3A1-202ENST00000317840 C20orf144Q9BQM9 153 aa8.57□□□□□ -1.04
COL3A1-202ENST00000317840 LOC400499M0QZD8 3231 aa8.57□□□□□ -1.04
COL3A1-202ENST00000317840 PCSK5Q92824 1860 aa8.57□□□□□ -1.04
COL3A1-202ENST00000317840 PRSS46E5RG02 174 aa8.57□□□□□ -1.04
COL3A1-202ENST00000317840 DLEU1O43261 78 aa8.57□□□□□ -1.04
COL3A1-202ENST00000317840 COX7A1P24310 79 aa8.57□□□□□ -1.04
COL3A1-202ENST00000317840 ZNF714Q96N38 554 aa8.57□□□□□ -1.04
COL3A1-202ENST00000317840 PTPN13Q12923 2485 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 A0A1W2PS18 150 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 HIGD1CA8MV81 97 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 NDUFB3O43676 98 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 NPSP0C0P6 89 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 C3orf79P0CE67 100 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 HIST1H1EP10412 219 aaKnown RBP8.56□□□□□ -1.04
COL3A1-202ENST00000317840 Q0VG73 95 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 LINC00305Q7Z4B0 112 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 VSTM2AQ8TAG5 236 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 C19orf24Q9BVV8 132 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 ZNF430Q9H8G1 570 aaPredicted RBP8.56□□□□□ -1.04
COL3A1-202ENST00000317840 RPUSD1Q9UJJ7 312 aaKnown RBP8.56□□□□□ -1.04
COL3A1-202ENST00000317840 LY96Q9Y6Y9 160 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 A0A1W2PN81 502 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 BMPR1BO00238 502 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 CHEK1O14757 476 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 IGHV1-46P01743 117 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 PRB4P10163 310 aaPredicted RBP8.56□□□□□ -1.04
COL3A1-202ENST00000317840 NBL1P41271 181 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 PPOXP50336 477 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 VMA21Q3ZAQ7 101 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 TEX43Q6ZNM6 134 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 TMEM136Q6ZRR5 245 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 DDB2Q92466 427 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 FAM168AQ92567 244 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 A0A0G2JNJ9 132 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 PEX7O00628 323 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 CSN3P07498 182 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 RNASE2P10153 161 aaKnown RBP8.56□□□□□ -1.04
COL3A1-202ENST00000317840 TNXAQ16473 311 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 Q9UFV3 132 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 ZNF257Q9Y2Q1 563 aa8.56□□□□□ -1.04
COL3A1-202ENST00000317840 C20orf202A1L168 122 aa8.55□□□□□ -1.04
COL3A1-202ENST00000317840 IZUMO1RA6ND01 250 aa8.55□□□□□ -1.04
COL3A1-202ENST00000317840 HSBP1L1C9JCN9 74 aa8.55□□□□□ -1.04
COL3A1-202ENST00000317840 PTTG1IPP53801 180 aa8.55□□□□□ -1.04
COL3A1-202ENST00000317840 LRRC10Q5BKY1 277 aa8.55□□□□□ -1.04
COL3A1-202ENST00000317840 MORN5Q5VZ52 161 aa8.55□□□□□ -1.04
COL3A1-202ENST00000317840 OR4C13Q8NGP0 309 aa8.55□□□□□ -1.04
COL3A1-202ENST00000317840 OSR1Q8TAX0 266 aaPredicted RBP8.55□□□□□ -1.04
COL3A1-202ENST00000317840 CHRDL1Q9BU40 450 aa8.55□□□□□ -1.04
COL3A1-202ENST00000317840 LPAR2Q9HBW0 351 aa8.55□□□□□ -1.04
COL3A1-202ENST00000317840 TNFRSF19Q9NS68 423 aa8.55□□□□□ -1.04
COL3A1-202ENST00000317840 FAM215AQ9Y5M1 114 aa8.55□□□□□ -1.04
COL3A1-202ENST00000317840 ZNF292O60281 2723 aa8.55□□□□□ -1.04
COL3A1-202ENST00000317840 DSCAMO60469 2012 aa8.55□□□□□ -1.04
COL3A1-202ENST00000317840 TET2Q6N021 2002 aaPredicted RBP8.55□□□□□ -1.04
COL3A1-202ENST00000317840 SLAQ13239 276 aa8.55□□□□□ -1.04
COL3A1-202ENST00000317840 C2orf83Q53S99 150 aa8.55□□□□□ -1.04
COL3A1-202ENST00000317840 OR10J3Q5JRS4 329 aa8.55□□□□□ -1.04
COL3A1-202ENST00000317840 C1orf159Q96HA4 380 aa8.55□□□□□ -1.04
COL3A1-202ENST00000317840 MRPL32Q9BYC8 188 aaKnown RBP8.55□□□□□ -1.04
COL3A1-202ENST00000317840 NOTCH3Q9UM47 2321 aa8.55□□□□□ -1.04
COL3A1-202ENST00000317840 HES1Q14469 280 aa8.55□□□□□ -1.04
COL3A1-202ENST00000317840 LEMD1Q68G75 181 aa8.55□□□□□ -1.04
COL3A1-202ENST00000317840 TCF24Q7RTU0 167 aa8.55□□□□□ -1.04
COL3A1-202ENST00000317840 GAFA1Q96PS6 74 aa8.55□□□□□ -1.04
COL3A1-202ENST00000317840 TNRC6BQ9UPQ9 1833 aaKnown RBP8.55□□□□□ -1.04
COL3A1-202ENST00000317840 P01737 135 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 NUDT10Q8NFP7 164 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 CACNG8Q8WXS5 425 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 NUDT11Q96G61 164 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 OR8B2Q96RD0 313 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 DKK4Q9UBT3 224 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 MYO18BQ8IUG5 2567 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 PAX1P15863 534 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 LYZP61626 148 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 ST6GALNAC6Q969X2 333 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 PGLYRP4Q96LB8 373 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 LAMTOR2Q9Y2Q5 125 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 LINC00310P59036 64 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 PMCHL1Q16048 86 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 AARDQ4LEZ3 155 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 C19orf35Q6ZS72 473 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 SLC25A48Q6ZT89 311 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms