RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 CD7P09564 240 aa7.35□□□□□ -1.23
USF3-201ENST00000316407 NPPCP23582 126 aa7.35□□□□□ -1.23
USF3-201ENST00000316407 FAM90A2PQ658T7 463 aa7.35□□□□□ -1.23
USF3-201ENST00000316407 CHCHD1Q96BP2 118 aaKnown RBP7.35□□□□□ -1.23
USF3-201ENST00000316407 LAMTOR3Q9UHA4 124 aa7.35□□□□□ -1.23
USF3-201ENST00000316407 ITLN2Q8WWU7 325 aaPredicted RBP7.35□□□□□ -1.23
USF3-201ENST00000316407 REG4Q9BYZ8 158 aa7.35□□□□□ -1.23
USF3-201ENST00000316407 IFITM1P13164 125 aa7.35□□□□□ -1.23
USF3-201ENST00000316407 SCARF2Q96GP6 870 aaPredicted RBP7.35□□□□□ -1.23
USF3-201ENST00000316407 MGST3O14880 152 aa7.35□□□□□ -1.23
USF3-201ENST00000316407 RS1O15537 224 aa7.35□□□□□ -1.23
USF3-201ENST00000316407 GCSAMQ8N6F7 178 aa7.35□□□□□ -1.23
USF3-201ENST00000316407 ATP6V0BQ99437 205 aa7.35□□□□□ -1.23
USF3-201ENST00000316407 TSSC4Q9Y5U2 329 aaPredicted RBP7.35□□□□□ -1.23
USF3-201ENST00000316407 TRAV13-1A0A0B4J241 112 aa7.35□□□□□ -1.23
USF3-201ENST00000316407 CREBBPQ92793 2442 aa7.35□□□□□ -1.23
USF3-201ENST00000316407 GREM1O60565 184 aa7.35□□□□□ -1.23
USF3-201ENST00000316407 ZNF525Q8N782 197 aa7.35□□□□□ -1.23
USF3-201ENST00000316407 IGHV5-10-1A0A0J9YXX1 117 aa7.35□□□□□ -1.23
USF3-201ENST00000316407 CD5P06127 495 aa7.35□□□□□ -1.23
USF3-201ENST00000316407 ZP4Q12836 540 aa7.35□□□□□ -1.23
USF3-201ENST00000316407 CFHR5Q9BXR6 569 aa7.35□□□□□ -1.23
USF3-201ENST00000316407 A0A1W2PQF6 199 aa7.34□□□□□ -1.23
USF3-201ENST00000316407 C4orf51C9J302 202 aa7.34□□□□□ -1.23
USF3-201ENST00000316407 H7C1H1 209 aa7.34□□□□□ -1.23
USF3-201ENST00000316407 CCL4P13236 92 aa7.34□□□□□ -1.23
USF3-201ENST00000316407 IFI27P40305 119 aaPredicted RBP7.34□□□□□ -1.23
USF3-201ENST00000316407 ASCL2Q99929 193 aa7.34□□□□□ -1.23
USF3-201ENST00000316407 COL24A1Q17RW2 1714 aa7.34□□□□□ -1.23
USF3-201ENST00000316407 NAV3Q8IVL0 2385 aa7.34□□□□□ -1.23
USF3-201ENST00000316407 FOXC1Q12948 553 aa7.34□□□□□ -1.23
USF3-201ENST00000316407 POLR3KQ9Y2Y1 108 aaPredicted RBP7.34□□□□□ -1.23
USF3-201ENST00000316407 ITGB1BP1O14713 200 aa7.34□□□□□ -1.23
USF3-201ENST00000316407 GFRA3O60609 400 aa7.34□□□□□ -1.23
USF3-201ENST00000316407 LGALS1P09382 135 aaKnown RBP7.34□□□□□ -1.23
USF3-201ENST00000316407 TRBV20-1A0A075B6N2 111 aa7.34□□□□□ -1.23
USF3-201ENST00000316407 SUMO4Q6EEV6 95 aa7.34□□□□□ -1.23
USF3-201ENST00000316407 KLF14Q8TD94 323 aaPredicted RBP7.34□□□□□ -1.23
USF3-201ENST00000316407 NPIPB11E5RHQ5 1161 aa7.34□□□□□ -1.23
USF3-201ENST00000316407 C1orf174Q8IYL3 243 aa7.34□□□□□ -1.23
USF3-201ENST00000316407 FAM231BA6NCW3 169 aa7.34□□□□□ -1.23
USF3-201ENST00000316407 TFF1P04155 84 aa7.34□□□□□ -1.23
USF3-201ENST00000316407 COL9A1P20849 921 aa7.34□□□□□ -1.23
USF3-201ENST00000316407 COX5BP10606 129 aa7.34□□□□□ -1.23
USF3-201ENST00000316407 SRFP11831 508 aa7.34□□□□□ -1.23
USF3-201ENST00000316407 STPG4Q8N801 248 aa7.34□□□□□ -1.23
USF3-201ENST00000316407 YBX2Q9Y2T7 364 aaKnown RBP7.34□□□□□ -1.23
USF3-201ENST00000316407 UCP1P25874 307 aa7.34□□□□□ -1.24
USF3-201ENST00000316407 AGRNO00468 2067 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 SMKR1H3BMG3 65 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 PRB2P02812 416 aaPredicted RBP7.33□□□□□ -1.24
USF3-201ENST00000316407 WBP1LQ9NX94 342 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 IDI2-AS1Q9NZ38 188 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 C3orf79P0CE67 100 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 SNHG12Q9BXW3 62 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 TRAV30A0A087WSZ9 112 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 NPIPB13A6NJU9 1138 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 NPIPB5A8MRT5 1133 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 H0YIZ8 118 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 SYS1-DBNDD2H3BUS1 97 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 K7ERJ3 54 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 IGKV2-40A0A087WW87 121 aaPredicted RBP7.33□□□□□ -1.24
USF3-201ENST00000316407 IGKV2D-40P01614 121 aaPredicted RBP7.33□□□□□ -1.24
USF3-201ENST00000316407 IGHV2-70P01814 119 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 TFF2Q03403 129 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 DCTN5Q9BTE1 182 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 SRD5A1P18405 259 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 PLPPR1Q8TBJ4 325 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 MUC4Q99102 2169 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 F8VVB4 439 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 F8VWA3 439 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 FOXH1O75593 365 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 NAPSAO96009 420 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 TMEM74BQ9NUR3 256 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 A0A0G2JK05 382 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 ANXA2RQ3ZCQ2 193 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 Q6AWC8 147 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 UNQ9370/PRO34162Q6UXP9 181 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 NEUROG3Q9Y4Z2 214 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 EXPH5Q8NEV8 1989 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 A0A1B0GTI1 187 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 ZNF474Q6S9Z5 364 aaPredicted RBP7.33□□□□□ -1.24
USF3-201ENST00000316407 OR5P3Q8WZ94 311 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 FAM106AQ4KMX7 169 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 C18orf12Q96KH6 178 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 C1orf43Q9BWL3 253 aa7.33□□□□□ -1.24
USF3-201ENST00000316407 TMEM14DPA8MWL7 114 aa7.32□□□□□ -1.24
USF3-201ENST00000316407 TMEM144Q7Z5S9 345 aa7.32□□□□□ -1.24
USF3-201ENST00000316407 CHAC1Q9BUX1 264 aa7.32□□□□□ -1.24
USF3-201ENST00000316407 PHF7Q9BWX1 381 aaPredicted RBP7.32□□□□□ -1.24
USF3-201ENST00000316407 ALPK3Q96L96 1907 aa7.32□□□□□ -1.24
USF3-201ENST00000316407 IGKV1D-13A0A0B4J2D9 117 aa7.32□□□□□ -1.24
USF3-201ENST00000316407 H3BMM0 161 aa7.32□□□□□ -1.24
USF3-201ENST00000316407 CISD3P0C7P0 127 aa7.32□□□□□ -1.24
USF3-201ENST00000316407 IGKV1-13P0DP09 117 aa7.32□□□□□ -1.24
USF3-201ENST00000316407 ZNF114Q8NC26 417 aa7.32□□□□□ -1.24
USF3-201ENST00000316407 UBE2WQ96B02 151 aa7.32□□□□□ -1.24
USF3-201ENST00000316407 WISP3O95389 354 aaPredicted RBP7.32□□□□□ -1.24
USF3-201ENST00000316407 KLF17Q5JT82 389 aaPredicted RBP7.32□□□□□ -1.24
USF3-201ENST00000316407 IL9P15248 144 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms