RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 Q6ZS46 218 aa12.71□□□□□ -0.37
TUBB3-201ENST00000315491 C15orf62A8K5M9 175 aa12.71□□□□□ -0.38
TUBB3-201ENST00000315491 HIST1H2BKO60814 126 aa12.71□□□□□ -0.38
TUBB3-201ENST00000315491 HIST1H2BJP06899 126 aa12.71□□□□□ -0.38
TUBB3-201ENST00000315491 HIST1H2BOP23527 126 aa12.71□□□□□ -0.38
TUBB3-201ENST00000315491 NPY1RP25929 384 aa12.71□□□□□ -0.38
TUBB3-201ENST00000315491 HIST1H2BBP33778 126 aa12.71□□□□□ -0.38
TUBB3-201ENST00000315491 HIST1H2BDP58876 126 aa12.71□□□□□ -0.38
TUBB3-201ENST00000315491 HIST1H2BCP62807 126 aa12.71□□□□□ -0.38
TUBB3-201ENST00000315491 EWSR1Q01844 656 aaKnown RBP eCLIP12.71□□□□□ -0.38
TUBB3-201ENST00000315491 TMEM267Q0VDI3 215 aaPredicted RBP12.71□□□□□ -0.38
TUBB3-201ENST00000315491 HIST2H2BEQ16778 126 aa12.71□□□□□ -0.38
TUBB3-201ENST00000315491 BSXQ3C1V8 233 aa12.71□□□□□ -0.38
TUBB3-201ENST00000315491 KHDC3LQ587J8 217 aa12.71□□□□□ -0.38
TUBB3-201ENST00000315491 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.71□□□□□ -0.38
TUBB3-201ENST00000315491 ASPHD1Q5U4P2 390 aa12.71□□□□□ -0.38
TUBB3-201ENST00000315491 HIST1H2BHQ93079 126 aa12.71□□□□□ -0.38
TUBB3-201ENST00000315491 JMJD8Q96S16 334 aa12.71□□□□□ -0.38
TUBB3-201ENST00000315491 HIST1H2BNQ99877 126 aa12.71□□□□□ -0.38
TUBB3-201ENST00000315491 HIST1H2BMQ99879 126 aa12.71□□□□□ -0.38
TUBB3-201ENST00000315491 PLXNB1O43157 2135 aa12.7□□□□□ -0.38
TUBB3-201ENST00000315491 METTL15P1P0C7V9 234 aa12.7□□□□□ -0.38
TUBB3-201ENST00000315491 RNASE2P10153 161 aaKnown RBP12.7□□□□□ -0.38
TUBB3-201ENST00000315491 ATP5IP56385 69 aaPredicted RBP12.7□□□□□ -0.38
TUBB3-201ENST00000315491 ELOBQ15370 118 aa12.7□□□□□ -0.38
TUBB3-201ENST00000315491 ECSCRQ19T08 205 aa12.7□□□□□ -0.38
TUBB3-201ENST00000315491 TMEM170AQ8WVE7 144 aa12.7□□□□□ -0.38
TUBB3-201ENST00000315491 RAB24Q969Q5 203 aa12.7□□□□□ -0.38
TUBB3-201ENST00000315491 NOL4LQ96MY1 436 aaPredicted RBP12.7□□□□□ -0.38
TUBB3-201ENST00000315491 P2RX4Q99571 388 aa12.7□□□□□ -0.38
TUBB3-201ENST00000315491 PRSS22Q9GZN4 317 aa12.7□□□□□ -0.38
TUBB3-201ENST00000315491 F8P00451 2351 aa12.69□□□□□ -0.38
TUBB3-201ENST00000315491 RNASE1P07998 156 aaKnown RBP12.69□□□□□ -0.38
TUBB3-201ENST00000315491 CRIP2P52943 208 aaPredicted RBP12.69□□□□□ -0.38
TUBB3-201ENST00000315491 RAB11AP62491 216 aa12.69□□□□□ -0.38
TUBB3-201ENST00000315491 C2orf83Q53S99 150 aa12.69□□□□□ -0.38
TUBB3-201ENST00000315491 UNQ5815/PRO19632Q6UWF5 114 aa12.69□□□□□ -0.38
TUBB3-201ENST00000315491 ZNF114Q8NC26 417 aa12.69□□□□□ -0.38
TUBB3-201ENST00000315491 NPIPB5A8MRT5 1133 aa12.69□□□□□ -0.38
TUBB3-201ENST00000315491 TCAPO15273 167 aa12.69□□□□□ -0.38
TUBB3-201ENST00000315491 CST7O76096 145 aa12.69□□□□□ -0.38
TUBB3-201ENST00000315491 IGF1P05019 195 aa12.69□□□□□ -0.38
TUBB3-201ENST00000315491 CRYGCP07315 174 aa12.69□□□□□ -0.38
TUBB3-201ENST00000315491 SUB1P53999 127 aaKnown RBP eCLIP12.69□□□□□ -0.38
TUBB3-201ENST00000315491 NHLH2Q02577 135 aa12.69□□□□□ -0.38
TUBB3-201ENST00000315491 BAXQ07812 192 aa12.69□□□□□ -0.38
TUBB3-201ENST00000315491 C19orf35Q6ZS72 473 aa12.69□□□□□ -0.38
TUBB3-201ENST00000315491 TTC9CQ8N5M4 171 aa12.69□□□□□ -0.38
TUBB3-201ENST00000315491 Q8WTZ3 238 aa12.69□□□□□ -0.38
TUBB3-201ENST00000315491 ZNF702PQ9H963 129 aa12.69□□□□□ -0.38
TUBB3-201ENST00000315491 PUS1Q9Y606 427 aaKnown RBP eCLIP12.69□□□□□ -0.38
TUBB3-201ENST00000315491 F11RQ9Y624 299 aaKnown RBP12.69□□□□□ -0.38
TUBB3-201ENST00000315491 FAM181BA6NEQ2 426 aa12.68□□□□□ -0.38
TUBB3-201ENST00000315491 PMS2P5A8MQ11 134 aa12.68□□□□□ -0.38
TUBB3-201ENST00000315491 CXCL1P09341 107 aa12.68□□□□□ -0.38
TUBB3-201ENST00000315491 BSCL2Q96G97 398 aaPredicted RBP12.68□□□□□ -0.38
TUBB3-201ENST00000315491 RCC1LQ96I51 464 aaKnown RBP12.68□□□□□ -0.38
TUBB3-201ENST00000315491 GPR61Q9BZJ8 451 aa12.68□□□□□ -0.38
TUBB3-201ENST00000315491 SMIM3Q9BZL3 60 aa12.68□□□□□ -0.38
TUBB3-201ENST00000315491 WFDC1Q9HC57 220 aa12.68□□□□□ -0.38
TUBB3-201ENST00000315491 LINC00527Q9UJ94 153 aa12.68□□□□□ -0.38
TUBB3-201ENST00000315491 TRAV41A0A0B4J266 112 aa12.67□□□□□ -0.38
TUBB3-201ENST00000315491 G3V318 75 aa12.67□□□□□ -0.38
TUBB3-201ENST00000315491 H3BQ15 152 aa12.67□□□□□ -0.38
TUBB3-201ENST00000315491 OR8G2PQ6IF36 304 aa12.67□□□□□ -0.38
TUBB3-201ENST00000315491 HAPLN4Q86UW8 402 aa12.67□□□□□ -0.38
TUBB3-201ENST00000315491 TMEM217Q8N7C4 229 aa12.67□□□□□ -0.38
TUBB3-201ENST00000315491 OR5T1Q8NG75 326 aa12.67□□□□□ -0.38
TUBB3-201ENST00000315491 OR1P1Q8NH06 330 aa12.67□□□□□ -0.38
TUBB3-201ENST00000315491 FAM110DQ8TAY7 271 aaPredicted RBP12.67□□□□□ -0.38
TUBB3-201ENST00000315491 MISP3Q96FF7 219 aa12.67□□□□□ -0.38
TUBB3-201ENST00000315491 WNT10AQ9GZT5 417 aa12.67□□□□□ -0.38
TUBB3-201ENST00000315491 TCF21O43680 179 aa12.66□□□□□ -0.38
TUBB3-201ENST00000315491 SCAF4O95104 1147 aaKnown RBP12.66□□□□□ -0.38
TUBB3-201ENST00000315491 PRH1P02810 166 aa12.66□□□□□ -0.38
TUBB3-201ENST00000315491 SRP19P09132 144 aaKnown RBP12.66□□□□□ -0.38
TUBB3-201ENST00000315491 DEFA4P12838 97 aa12.66□□□□□ -0.38
TUBB3-201ENST00000315491 FGF7P21781 194 aa12.66□□□□□ -0.38
TUBB3-201ENST00000315491 TAGLN2P37802 199 aaKnown RBP12.66□□□□□ -0.38
TUBB3-201ENST00000315491 NUTF2P61970 127 aaKnown RBP12.66□□□□□ -0.38
TUBB3-201ENST00000315491 ARL16Q0P5N6 197 aa12.66□□□□□ -0.38
TUBB3-201ENST00000315491 C19orf54Q5BKX5 351 aa12.66□□□□□ -0.38
TUBB3-201ENST00000315491 ARSJQ5FYB0 599 aaPredicted RBP12.66□□□□□ -0.38
TUBB3-201ENST00000315491 OR10P1Q8NGE3 313 aa12.66□□□□□ -0.38
TUBB3-201ENST00000315491 RNASEH2CQ8TDP1 164 aaKnown RBP12.66□□□□□ -0.38
TUBB3-201ENST00000315491 NDUFAF3Q9BU61 184 aa12.66□□□□□ -0.38
TUBB3-201ENST00000315491 ZNF580Q9UK33 172 aa12.66□□□□□ -0.38
TUBB3-201ENST00000315491 MXRA5Q9NR99 2828 aa12.66□□□□□ -0.38
TUBB3-201ENST00000315491 RBFOX3A6NFN3 312 aa12.66□□□□□ -0.38
TUBB3-201ENST00000315491 B4DEV8 164 aa12.66□□□□□ -0.38
TUBB3-201ENST00000315491 MFAP2P55001 183 aa12.66□□□□□ -0.38
TUBB3-201ENST00000315491 RPL15P61313 204 aaKnown RBP12.66□□□□□ -0.38
TUBB3-201ENST00000315491 JOSD1Q15040 202 aaPredicted RBP12.66□□□□□ -0.38
TUBB3-201ENST00000315491 TMEM95Q3KNT9 176 aa12.66□□□□□ -0.38
TUBB3-201ENST00000315491 PVRIGQ6DKI7 326 aa12.66□□□□□ -0.38
TUBB3-201ENST00000315491 Q8N2B8 174 aa12.66□□□□□ -0.38
TUBB3-201ENST00000315491 OR1L6Q8NGR2 347 aa12.66□□□□□ -0.38
TUBB3-201ENST00000315491 PRO1933Q9H354 126 aa12.66□□□□□ -0.38
TUBB3-201ENST00000315491 FN1P02751 2386 aaKnown RBP12.65□□□□□ -0.38
TUBB3-201ENST00000315491 SMCO3A2RU48 225 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms