RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 C10orf55Q5SWW7 151 aa11.38□□□□□ -0.59
SPAST-201ENST00000315285 C20orf204Q6ZNR8 217 aa11.38□□□□□ -0.59
SPAST-201ENST00000315285 COQ2Q96H96 371 aa11.38□□□□□ -0.59
SPAST-201ENST00000315285 DMRTA2Q96SC8 542 aa11.38□□□□□ -0.59
SPAST-201ENST00000315285 HELZP42694 1942 aaKnown RBP11.38□□□□□ -0.59
SPAST-201ENST00000315285 LINC00473A8K010 186 aa11.38□□□□□ -0.59
SPAST-201ENST00000315285 SPATA31B1PQ5VZV4 182 aa11.38□□□□□ -0.59
SPAST-201ENST00000315285 TMEM160Q9NX00 188 aa11.38□□□□□ -0.59
SPAST-201ENST00000315285 OR11H12B2RN74 326 aa11.38□□□□□ -0.59
SPAST-201ENST00000315285 Q6ZRM9 215 aa11.38□□□□□ -0.59
SPAST-201ENST00000315285 OR11H1Q8NG94 326 aa11.38□□□□□ -0.59
SPAST-201ENST00000315285 OR11H2Q8NH07 326 aa11.38□□□□□ -0.59
SPAST-201ENST00000315285 SLC25A15Q9Y619 301 aa11.38□□□□□ -0.59
SPAST-201ENST00000315285 PLXNA2O75051 1894 aa11.38□□□□□ -0.59
SPAST-201ENST00000315285 TRAV3A0A0B4J244 114 aa11.37□□□□□ -0.59
SPAST-201ENST00000315285 SNRPD3P62318 126 aaKnown RBP11.37□□□□□ -0.59
SPAST-201ENST00000315285 ZNF56Q15929 161 aa11.37□□□□□ -0.59
SPAST-201ENST00000315285 CLEC19AQ6UXS0 136 aa11.37□□□□□ -0.59
SPAST-201ENST00000315285 MGST2Q99735 147 aa11.37□□□□□ -0.59
SPAST-201ENST00000315285 RAXQ9Y2V3 346 aa11.37□□□□□ -0.59
SPAST-201ENST00000315285 TRAV5A0A0B4J249 113 aa11.37□□□□□ -0.59
SPAST-201ENST00000315285 AMBPP02760 352 aa11.37□□□□□ -0.59
SPAST-201ENST00000315285 AGMATQ9BSE5 352 aa11.37□□□□□ -0.59
SPAST-201ENST00000315285 SEPSECSQ9HD40 501 aaKnown RBP11.37□□□□□ -0.59
SPAST-201ENST00000315285 CACNA1HO95180 2353 aa11.37□□□□□ -0.59
SPAST-201ENST00000315285 CRXO43186 299 aaPredicted RBP11.37□□□□□ -0.59
SPAST-201ENST00000315285 SNAI2O43623 268 aa11.37□□□□□ -0.59
SPAST-201ENST00000315285 CA1P00915 261 aaPredicted RBP11.37□□□□□ -0.59
SPAST-201ENST00000315285 CD24P25063 80 aa11.37□□□□□ -0.59
SPAST-201ENST00000315285 MST1LQ2TV78 715 aa11.37□□□□□ -0.59
SPAST-201ENST00000315285 CCL19Q99731 98 aa11.37□□□□□ -0.59
SPAST-201ENST00000315285 DERL1Q9BUN8 251 aa11.37□□□□□ -0.59
SPAST-201ENST00000315285 TRAV8-6A0A0B4J262 113 aa11.37□□□□□ -0.59
SPAST-201ENST00000315285 LGALS3P17931 250 aaKnown RBP11.37□□□□□ -0.59
SPAST-201ENST00000315285 FOXL1Q12952 345 aa11.37□□□□□ -0.59
SPAST-201ENST00000315285 PEF1Q9UBV8 284 aaKnown RBP11.37□□□□□ -0.59
SPAST-201ENST00000315285 IGKV3-20P01619 116 aa11.36□□□□□ -0.59
SPAST-201ENST00000315285 ST6GALNAC3Q8NDV1 305 aa11.36□□□□□ -0.59
SPAST-201ENST00000315285 COL6A6A6NMZ7 2263 aa11.36□□□□□ -0.59
SPAST-201ENST00000315285 IGHV3OR16-12A0A075B7B8 117 aa11.36□□□□□ -0.59
SPAST-201ENST00000315285 HS3ST6Q96QI5 342 aa11.36□□□□□ -0.59
SPAST-201ENST00000315285 PRSS2P07478 247 aa11.36□□□□□ -0.59
SPAST-201ENST00000315285 ANAPC10Q9UM13 185 aa11.36□□□□□ -0.59
SPAST-201ENST00000315285 MLNRO43193 412 aa11.36□□□□□ -0.59
SPAST-201ENST00000315285 ASIPP42127 132 aa11.36□□□□□ -0.59
SPAST-201ENST00000315285 TNFRSF14Q92956 283 aa11.36□□□□□ -0.59
SPAST-201ENST00000315285 RAX2Q96IS3 184 aa11.36□□□□□ -0.59
SPAST-201ENST00000315285 NOTCH4Q99466 2003 aa11.36□□□□□ -0.59
SPAST-201ENST00000315285 TIMM23O14925 209 aa11.35□□□□□ -0.59
SPAST-201ENST00000315285 COX6CP09669 75 aa11.35□□□□□ -0.59
SPAST-201ENST00000315285 ATP5LO75964 103 aa11.35□□□□□ -0.59
SPAST-201ENST00000315285 LAMTOR2Q9Y2Q5 125 aa11.35□□□□□ -0.59
SPAST-201ENST00000315285 CDKN1AP38936 164 aa11.35□□□□□ -0.59
SPAST-201ENST00000315285 LINC00205P59089 165 aa11.35□□□□□ -0.59
SPAST-201ENST00000315285 COLCA1Q6ZS62 124 aa11.35□□□□□ -0.59
SPAST-201ENST00000315285 TSKUQ8WUA8 353 aa11.35□□□□□ -0.59
SPAST-201ENST00000315285 PSG8Q9UQ74 426 aa11.35□□□□□ -0.59
SPAST-201ENST00000315285 IGKV1-6A0A0C4DH72 117 aa11.35□□□□□ -0.59
SPAST-201ENST00000315285 OR10J3Q5JRS4 329 aa11.35□□□□□ -0.59
SPAST-201ENST00000315285 AMMECR1LQ6DCA0 310 aa11.35□□□□□ -0.59
SPAST-201ENST00000315285 PLXND1Q9Y4D7 1925 aa11.35□□□□□ -0.59
SPAST-201ENST00000315285 C9JCJ5 164 aa11.34□□□□□ -0.59
SPAST-201ENST00000315285 A0A0G2JLM5 398 aa11.34□□□□□ -0.59
SPAST-201ENST00000315285 C9JQL5 133 aa11.34□□□□□ -0.59
SPAST-201ENST00000315285 C19orf54Q5BKX5 351 aa11.34□□□□□ -0.59
SPAST-201ENST00000315285 DOCK9Q9BZ29 2069 aa11.34□□□□□ -0.59
SPAST-201ENST00000315285 C15orf62A8K5M9 175 aa11.34□□□□□ -0.59
SPAST-201ENST00000315285 FABP5P3A8MUU1 101 aa11.34□□□□□ -0.59
SPAST-201ENST00000315285 C8orf46Q8TAG6 207 aa11.34□□□□□ -0.59
SPAST-201ENST00000315285 NTF4P34130 210 aa11.34□□□□□ -0.59
SPAST-201ENST00000315285 TMEM200BQ69YZ2 307 aa11.34□□□□□ -0.59
SPAST-201ENST00000315285 SPSB3Q6PJ21 355 aa11.34□□□□□ -0.59
SPAST-201ENST00000315285 DUX5Q96PT3 197 aa11.34□□□□□ -0.59
SPAST-201ENST00000315285 FOXC2Q99958 501 aa11.34□□□□□ -0.59
SPAST-201ENST00000315285 IGKV1D-17A0A075B6S4 117 aa11.33□□□□□ -0.59
SPAST-201ENST00000315285 SMIM13P0DJ93 91 aa11.33□□□□□ -0.59
SPAST-201ENST00000315285 ZNF585BQ52M93 769 aa11.33□□□□□ -0.59
SPAST-201ENST00000315285 VKORC1Q9BQB6 163 aa11.33□□□□□ -0.59
SPAST-201ENST00000315285 DIDO1Q9BTC0 2240 aaKnown RBP11.33□□□□□ -0.6
SPAST-201ENST00000315285 CEACAM4O75871 244 aa11.33□□□□□ -0.6
SPAST-201ENST00000315285 DMRTA1Q5VZB9 504 aa11.33□□□□□ -0.6
SPAST-201ENST00000315285 PAPPA-AS1Q5QFB9 102 aa11.33□□□□□ -0.6
SPAST-201ENST00000315285 CENPVQ7Z7K6 275 aaPredicted RBP11.33□□□□□ -0.6
SPAST-201ENST00000315285 ARL6IP6Q8N6S5 226 aa11.33□□□□□ -0.6
SPAST-201ENST00000315285 SMIM12Q96EX1 92 aa11.33□□□□□ -0.6
SPAST-201ENST00000315285 PPP1R17O96001 155 aa11.33□□□□□ -0.6
SPAST-201ENST00000315285 LINC00614P0C842 121 aa11.33□□□□□ -0.6
SPAST-201ENST00000315285 PRSS8Q16651 343 aa11.33□□□□□ -0.6
SPAST-201ENST00000315285 RRN3P1Q2M238 152 aa11.33□□□□□ -0.6
SPAST-201ENST00000315285 FAM90A2PQ658T7 463 aa11.33□□□□□ -0.6
SPAST-201ENST00000315285 NUDT10Q8NFP7 164 aa11.33□□□□□ -0.6
SPAST-201ENST00000315285 NUDT11Q96G61 164 aa11.33□□□□□ -0.6
SPAST-201ENST00000315285 TRAV9-2A0A087WT02 112 aa11.32□□□□□ -0.6
SPAST-201ENST00000315285 IGHV2-26A0A0B4J1V2 119 aa11.32□□□□□ -0.6
SPAST-201ENST00000315285 IGHG3P01860 377 aa11.32□□□□□ -0.6
SPAST-201ENST00000315285 MYOD1P15172 320 aa11.32□□□□□ -0.6
SPAST-201ENST00000315285 CYB5R2Q6BCY4 276 aa11.32□□□□□ -0.6
SPAST-201ENST00000315285 SLC50A1Q9BRV3 221 aa11.32□□□□□ -0.6
SPAST-201ENST00000315285 IGHV1-8P0DP01 117 aa11.32□□□□□ -0.6
SPAST-201ENST00000315285 TTC9CQ8N5M4 171 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms