RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 CAMPP49913 170 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 LINC00173Q6ZV60 143 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 FAM169BQ8N8A8 192 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 GAFA1Q96PS6 74 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 CCL13Q99616 98 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 PLCE1Q9P212 2302 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 TRAV30A0A087WSZ9 112 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 M0R1B8 84 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 TAX1BP3O14907 124 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 FAM216BQ8N7L0 139 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 CACNG8Q8WXS5 425 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 GRAMD2BQ96HH9 432 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 ZNF714Q96N38 554 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 LINC00574Q9H8X3 128 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 NDUFA4L2Q9NRX3 87 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 RPUSD1Q9UJJ7 312 aaKnown RBP10.88□□□□□ -0.67
SKA3-202ENST00000314759 hDV102S1A0JD36 115 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 OR2T8A6NH00 312 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 VWC2LB2RUY7 222 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 PEX7O00628 323 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 NKX2-8O15522 239 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 KLF5Q13887 457 aaPredicted RBP10.88□□□□□ -0.67
SKA3-202ENST00000314759 PRR27Q6MZM9 219 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 PATE2Q6UY27 113 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 SARAFQ96BY9 339 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 PAXXQ9BUH6 204 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 RNF7Q9UBF6 113 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 WASHC3Q9Y3C0 194 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 BOD1L1Q8NFC6 3051 aa10.87□□□□□ -0.67
SKA3-202ENST00000314759 S100A7P31151 101 aa10.87□□□□□ -0.67
SKA3-202ENST00000314759 SRSF6Q13247 344 aaKnown RBP10.87□□□□□ -0.67
SKA3-202ENST00000314759 HIGD1CA8MV81 97 aa10.87□□□□□ -0.67
SKA3-202ENST00000314759 CORTO00230 105 aa10.87□□□□□ -0.67
SKA3-202ENST00000314759 DLL1O00548 723 aa10.87□□□□□ -0.67
SKA3-202ENST00000314759 COX7A2P2O60397 106 aa10.87□□□□□ -0.67
SKA3-202ENST00000314759 NUDT3O95989 172 aa10.87□□□□□ -0.67
SKA3-202ENST00000314759 IGHV3-48P01763 117 aa10.87□□□□□ -0.67
SKA3-202ENST00000314759 GLRXP35754 106 aa10.87□□□□□ -0.67
SKA3-202ENST00000314759 LRRC10Q5BKY1 277 aa10.87□□□□□ -0.67
SKA3-202ENST00000314759 ZNF841Q6ZN19 808 aa10.87□□□□□ -0.67
SKA3-202ENST00000314759 VPS25Q9BRG1 176 aa10.87□□□□□ -0.67
SKA3-202ENST00000314759 CST9LQ9H4G1 147 aa10.87□□□□□ -0.67
SKA3-202ENST00000314759 GSX1Q9H4S2 264 aaPredicted RBP10.87□□□□□ -0.67
SKA3-202ENST00000314759 FNDC4Q9H6D8 234 aaPredicted RBP10.87□□□□□ -0.67
SKA3-202ENST00000314759 SAP30LQ9HAJ7 183 aa10.87□□□□□ -0.67
SKA3-202ENST00000314759 NAV3Q8IVL0 2385 aa10.87□□□□□ -0.67
SKA3-202ENST00000314759 GATA4P43694 442 aa10.86□□□□□ -0.67
SKA3-202ENST00000314759 C10orf113Q5VZT2 155 aa10.86□□□□□ -0.67
SKA3-202ENST00000314759 SEM1Q6ZVN7 128 aa10.86□□□□□ -0.67
SKA3-202ENST00000314759 MCRIP2Q9BUT9 160 aaKnown RBP10.86□□□□□ -0.67
SKA3-202ENST00000314759 MRPL20Q9BYC9 149 aaKnown RBP10.86□□□□□ -0.67
SKA3-202ENST00000314759 C7orf69Q9H7B7 122 aa10.86□□□□□ -0.67
SKA3-202ENST00000314759 LOC102724200A0A096LPH7 203 aaPredicted RBP10.86□□□□□ -0.67
SKA3-202ENST00000314759 OR4C46A6NHA9 309 aa10.86□□□□□ -0.67
SKA3-202ENST00000314759 OR2J3O76001 311 aa10.86□□□□□ -0.67
SKA3-202ENST00000314759 FSTL3O95633 263 aa10.86□□□□□ -0.67
SKA3-202ENST00000314759 PPBPP02775 128 aa10.86□□□□□ -0.67
SKA3-202ENST00000314759 GNG5P63218 68 aa10.86□□□□□ -0.67
SKA3-202ENST00000314759 ERHP84090 104 aaKnown RBP10.86□□□□□ -0.67
SKA3-202ENST00000314759 RHOGP84095 191 aa10.86□□□□□ -0.67
SKA3-202ENST00000314759 FAM120AOSQ5T036 256 aa10.86□□□□□ -0.67
SKA3-202ENST00000314759 FXYD5Q96DB9 178 aa10.86□□□□□ -0.67
SKA3-202ENST00000314759 ZC2HC1AQ96GY0 325 aa10.86□□□□□ -0.67
SKA3-202ENST00000314759 HARBI1Q96MB7 349 aa10.86□□□□□ -0.67
SKA3-202ENST00000314759 IGLV3-9A0A075B6K5 115 aa10.85□□□□□ -0.67
SKA3-202ENST00000314759 OCIAD2Q56VL3 154 aa10.85□□□□□ -0.67
SKA3-202ENST00000314759 ZNF788Q6ZQV5 615 aa10.85□□□□□ -0.67
SKA3-202ENST00000314759 NPIPB3Q92617 1050 aa10.85□□□□□ -0.67
SKA3-202ENST00000314759 RAI1Q7Z5J4 1906 aaPredicted RBP10.85□□□□□ -0.67
SKA3-202ENST00000314759 IGKV1D-37A0A075B6S9 117 aa10.85□□□□□ -0.67
SKA3-202ENST00000314759 MUC21A0A0G2JKD1 596 aa10.85□□□□□ -0.67
SKA3-202ENST00000314759 MUC21A0A140T8X8 626 aa10.85□□□□□ -0.67
SKA3-202ENST00000314759 FOXA3P55318 350 aaPredicted RBP10.85□□□□□ -0.67
SKA3-202ENST00000314759 WT1-ASQ06250 92 aa10.85□□□□□ -0.67
SKA3-202ENST00000314759 MUC21Q5SSG8 566 aa10.85□□□□□ -0.67
SKA3-202ENST00000314759 AMMECR1LQ6DCA0 310 aa10.85□□□□□ -0.67
SKA3-202ENST00000314759 ZNF833PQ6ZTB9 187 aa10.85□□□□□ -0.67
SKA3-202ENST00000314759 OSR1Q8TAX0 266 aaPredicted RBP10.85□□□□□ -0.67
SKA3-202ENST00000314759 ZNF596Q8TC21 504 aa10.85□□□□□ -0.67
SKA3-202ENST00000314759 SGK494Q96LW2 274 aa10.85□□□□□ -0.67
SKA3-202ENST00000314759 TMEM70Q9BUB7 260 aa10.85□□□□□ -0.67
SKA3-202ENST00000314759 TM4SF5O14894 197 aa10.85□□□□□ -0.67
SKA3-202ENST00000314759 PLAUP00749 431 aa10.85□□□□□ -0.67
SKA3-202ENST00000314759 WT1P19544 449 aaPredicted RBP10.85□□□□□ -0.67
SKA3-202ENST00000314759 BVES-AS1Q5T3Y7 98 aa10.85□□□□□ -0.67
SKA3-202ENST00000314759 MRPL36Q9P0J6 103 aaKnown RBP10.85□□□□□ -0.67
SKA3-202ENST00000314759 CGB1A6NKQ9 187 aa10.84□□□□□ -0.67
SKA3-202ENST00000314759 HIST1H1EP10412 219 aaKnown RBP10.84□□□□□ -0.67
SKA3-202ENST00000314759 MYCNOSP40205 109 aa10.84□□□□□ -0.67
SKA3-202ENST00000314759 TNFAIP6P98066 277 aaPredicted RBP10.84□□□□□ -0.67
SKA3-202ENST00000314759 C10orf55Q5SWW7 151 aa10.84□□□□□ -0.67
SKA3-202ENST00000314759 OR1L4Q8NGR5 311 aa10.84□□□□□ -0.67
SKA3-202ENST00000314759 A0A1B0GXF2 115 aa10.84□□□□□ -0.67
SKA3-202ENST00000314759 TCRBV4S1A1TA0A5B7 111 aa10.84□□□□□ -0.67
SKA3-202ENST00000314759 IGHV1-46P01743 117 aa10.84□□□□□ -0.67
SKA3-202ENST00000314759 REG1BP48304 166 aa10.84□□□□□ -0.67
SKA3-202ENST00000314759 ZNF474Q6S9Z5 364 aaPredicted RBP10.84□□□□□ -0.67
SKA3-202ENST00000314759 ZNF430Q9H8G1 570 aaPredicted RBP10.84□□□□□ -0.67
SKA3-202ENST00000314759 FOXE3Q13461 319 aa10.83□□□□□ -0.68
SKA3-202ENST00000314759 TIMM23BQ5SRD1 257 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms