RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 VENTXO95231 258 aa9.99□□□□□ -0.81
RNF4-201ENST00000314289 IGLV1-47P01700 117 aa9.99□□□□□ -0.81
RNF4-201ENST00000314289 USF1P22415 310 aaPredicted RBP9.99□□□□□ -0.81
RNF4-201ENST00000314289 TNXAQ16473 311 aa9.99□□□□□ -0.81
RNF4-201ENST00000314289 MIR17HGQ75NE6 70 aa9.99□□□□□ -0.81
RNF4-201ENST00000314289 KIR2DL5AQ8N109 375 aa9.99□□□□□ -0.81
RNF4-201ENST00000314289 MRPL36Q9P0J6 103 aaKnown RBP9.99□□□□□ -0.81
RNF4-201ENST00000314289 EPG5Q9HCE0 2579 aa9.99□□□□□ -0.81
RNF4-201ENST00000314289 IGHV1-3A0A0C4DH29 117 aa9.98□□□□□ -0.81
RNF4-201ENST00000314289 A0A1W2PPI3 338 aa9.98□□□□□ -0.81
RNF4-201ENST00000314289 NPSP0C0P6 89 aa9.98□□□□□ -0.81
RNF4-201ENST00000314289 AREGP15514 252 aa9.98□□□□□ -0.81
RNF4-201ENST00000314289 LCN2P80188 198 aa9.98□□□□□ -0.81
RNF4-201ENST00000314289 RPEQ96AT9 228 aa9.98□□□□□ -0.81
RNF4-201ENST00000314289 FNDC4Q9H6D8 234 aaPredicted RBP9.98□□□□□ -0.81
RNF4-201ENST00000314289 MDFIC2A0A1B0GVS7 189 aa9.98□□□□□ -0.81
RNF4-201ENST00000314289 RPLP1P05386 114 aaKnown RBP9.98□□□□□ -0.81
RNF4-201ENST00000314289 CBLN1P23435 193 aa9.98□□□□□ -0.81
RNF4-201ENST00000314289 ERHP84090 104 aaKnown RBP9.98□□□□□ -0.81
RNF4-201ENST00000314289 MRGPRG-AS1Q2M3A8 158 aa9.98□□□□□ -0.81
RNF4-201ENST00000314289 C11orf71Q6IPW1 123 aa9.98□□□□□ -0.81
RNF4-201ENST00000314289 TMEM167AQ8TBQ9 72 aa9.98□□□□□ -0.81
RNF4-201ENST00000314289 RAB1CQ92928 201 aa9.98□□□□□ -0.81
RNF4-201ENST00000314289 TMEM208Q9BTX3 173 aa9.98□□□□□ -0.81
RNF4-201ENST00000314289 FBXL15Q9H469 300 aa9.98□□□□□ -0.81
RNF4-201ENST00000314289 POLQO75417 2590 aa9.98□□□□□ -0.81
RNF4-201ENST00000314289 PRRX1P54821 245 aa9.98□□□□□ -0.81
RNF4-201ENST00000314289 FBLN7Q53RD9 439 aa9.98□□□□□ -0.81
RNF4-201ENST00000314289 ZNF596Q8TC21 504 aa9.98□□□□□ -0.81
RNF4-201ENST00000314289 TIMD4Q96H15 378 aa9.98□□□□□ -0.81
RNF4-201ENST00000314289 GOLT1BQ9Y3E0 138 aa9.98□□□□□ -0.81
RNF4-201ENST00000314289 LRRK2Q5S007 2527 aa9.97□□□□□ -0.81
RNF4-201ENST00000314289 F6UZH7 168 aa9.97□□□□□ -0.81
RNF4-201ENST00000314289 FCN1O00602 326 aa9.97□□□□□ -0.81
RNF4-201ENST00000314289 OR10J4P0C629 311 aa9.97□□□□□ -0.81
RNF4-201ENST00000314289 LINC00869P0C866 280 aa9.97□□□□□ -0.81
RNF4-201ENST00000314289 RAB31Q13636 194 aa9.97□□□□□ -0.81
RNF4-201ENST00000314289 VMA21Q3ZAQ7 101 aa9.97□□□□□ -0.81
RNF4-201ENST00000314289 ITLN2Q8WWU7 325 aaPredicted RBP9.97□□□□□ -0.81
RNF4-201ENST00000314289 ZNF462Q96JM2 2506 aa9.97□□□□□ -0.81
RNF4-201ENST00000314289 ZNF90Q03938 601 aa9.97□□□□□ -0.81
RNF4-201ENST00000314289 C2orf83Q53S99 150 aa9.97□□□□□ -0.81
RNF4-201ENST00000314289 VN1R17PQ8TDU5 208 aa9.97□□□□□ -0.81
RNF4-201ENST00000314289 NPIPB3Q92617 1050 aa9.97□□□□□ -0.81
RNF4-201ENST00000314289 SFRP2Q96HF1 295 aa9.97□□□□□ -0.81
RNF4-201ENST00000314289 YTHDF2Q9Y5A9 579 aaKnown RBP9.97□□□□□ -0.81
RNF4-201ENST00000314289 LIPFP07098 398 aa9.96□□□□□ -0.81
RNF4-201ENST00000314289 STAG3L2P0CL84 134 aa9.96□□□□□ -0.81
RNF4-201ENST00000314289 STAG3L3P0CL85 134 aa9.96□□□□□ -0.81
RNF4-201ENST00000314289 ZNF137PP52743 207 aa9.96□□□□□ -0.81
RNF4-201ENST00000314289 CD69Q07108 199 aa9.96□□□□□ -0.81
RNF4-201ENST00000314289 MORN5Q5VZ52 161 aa9.96□□□□□ -0.81
RNF4-201ENST00000314289 Q6ZWC4 215 aa9.96□□□□□ -0.81
RNF4-201ENST00000314289 VSTM2AQ8TAG5 236 aa9.96□□□□□ -0.81
RNF4-201ENST00000314289 UHRF2Q96PU4 802 aa9.96□□□□□ -0.81
RNF4-201ENST00000314289 HSPB9Q9BQS6 159 aa9.96□□□□□ -0.81
RNF4-201ENST00000314289 TIMM23O14925 209 aa9.96□□□□□ -0.82
RNF4-201ENST00000314289 DLEU1O43261 78 aa9.96□□□□□ -0.82
RNF4-201ENST00000314289 MC5RP33032 325 aa9.96□□□□□ -0.82
RNF4-201ENST00000314289 PRR20EP86478 221 aa9.96□□□□□ -0.82
RNF4-201ENST00000314289 PRR20CP86479 221 aa9.96□□□□□ -0.82
RNF4-201ENST00000314289 PRR20DP86480 221 aa9.96□□□□□ -0.82
RNF4-201ENST00000314289 PRR20BP86481 221 aa9.96□□□□□ -0.82
RNF4-201ENST00000314289 PRR20AP86496 221 aa9.96□□□□□ -0.82
RNF4-201ENST00000314289 TMEM144Q7Z5S9 345 aa9.96□□□□□ -0.82
RNF4-201ENST00000314289 SSBP3Q9BWW4 388 aaPredicted RBP9.96□□□□□ -0.82
RNF4-201ENST00000314289 GSX1Q9H4S2 264 aaPredicted RBP9.96□□□□□ -0.82
RNF4-201ENST00000314289 TRBV20OR9-2A0A075B6H5 130 aa9.96□□□□□ -0.82
RNF4-201ENST00000314289 TRAV5A0A0B4J249 113 aa9.96□□□□□ -0.82
RNF4-201ENST00000314289 PLGLAQ15195 96 aa9.96□□□□□ -0.82
RNF4-201ENST00000314289 C8orf31Q8N9H6 132 aa9.96□□□□□ -0.82
RNF4-201ENST00000314289 SLC45A2Q9UMX9 530 aa9.96□□□□□ -0.82
RNF4-201ENST00000314289 SCO2A0A1W2PP80 73 aa9.95□□□□□ -0.82
RNF4-201ENST00000314289 SLC17A3O00476 420 aa9.95□□□□□ -0.82
RNF4-201ENST00000314289 PDE6DO43924 150 aa9.95□□□□□ -0.82
RNF4-201ENST00000314289 SERF1AO75920 110 aa9.95□□□□□ -0.82
RNF4-201ENST00000314289 ZFP36P26651 326 aaKnown RBP9.95□□□□□ -0.82
RNF4-201ENST00000314289 FAM103A1Q9BTL3 118 aaKnown RBP9.95□□□□□ -0.82
RNF4-201ENST00000314289 SAMD10Q9BYL1 202 aa9.95□□□□□ -0.82
RNF4-201ENST00000314289 LPAR2Q9HBW0 351 aa9.95□□□□□ -0.82
RNF4-201ENST00000314289 LOC105371242A0A075B767 164 aa9.95□□□□□ -0.82
RNF4-201ENST00000314289 F2Z2F3 143 aa9.95□□□□□ -0.82
RNF4-201ENST00000314289 OR7C2O60412 319 aa9.95□□□□□ -0.82
RNF4-201ENST00000314289 MOSP00540 346 aa9.95□□□□□ -0.82
RNF4-201ENST00000314289 GCHFRP30047 84 aa9.95□□□□□ -0.82
RNF4-201ENST00000314289 MFAP2P55001 183 aa9.95□□□□□ -0.82
RNF4-201ENST00000314289 TPPP2P59282 170 aa9.95□□□□□ -0.82
RNF4-201ENST00000314289 RHOBP62745 196 aa9.95□□□□□ -0.82
RNF4-201ENST00000314289 PSG5Q15238 335 aa9.95□□□□□ -0.82
RNF4-201ENST00000314289 BAGE3Q86Y29 109 aa9.95□□□□□ -0.82
RNF4-201ENST00000314289 BAGE2Q86Y30 109 aa9.95□□□□□ -0.82
RNF4-201ENST00000314289 DOPEY1Q5JWR5 2465 aa9.95□□□□□ -0.82
RNF4-201ENST00000314289 CXorf1O96002 111 aa9.94□□□□□ -0.82
RNF4-201ENST00000314289 CRISP2P16562 243 aa9.94□□□□□ -0.82
RNF4-201ENST00000314289 TFPI2P48307 235 aa9.94□□□□□ -0.82
RNF4-201ENST00000314289 VAMP8Q9BV40 100 aa9.94□□□□□ -0.82
RNF4-201ENST00000314289 TP53TG3Q9ULZ0 132 aa9.94□□□□□ -0.82
RNF4-201ENST00000314289 SIGLEC9Q9Y336 463 aa9.94□□□□□ -0.82
RNF4-201ENST00000314289 GPR6P46095 362 aaPredicted RBP9.94□□□□□ -0.82
RNF4-201ENST00000314289 HES1Q14469 280 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms