RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 ZFP92A6NM28 416 aa15□□□□□ -0.01
VEGFB-201ENST00000309422 INMT-MINDY4F8WBC2 141 aa15□□□□□ -0.01
VEGFB-201ENST00000309422 CD5P06127 495 aa15□□□□□ -0.01
VEGFB-201ENST00000309422 PVALBP20472 110 aaPredicted RBP15□□□□□ -0.01
VEGFB-201ENST00000309422 CD81P60033 236 aa15□□□□□ -0.01
VEGFB-201ENST00000309422 POLR2GP62487 172 aaKnown RBP eCLIP15□□□□□ -0.01
VEGFB-201ENST00000309422 NRARPQ7Z6K4 114 aa15□□□□□ -0.01
VEGFB-201ENST00000309422 OR4D5Q8NGN0 318 aa15□□□□□ -0.01
VEGFB-201ENST00000309422 TUBA4BQ9H853 241 aa15□□□□□ -0.01
VEGFB-201ENST00000309422 PSENENQ9NZ42 101 aa15□□□□□ -0.01
VEGFB-201ENST00000309422 MLXQ9UH92 298 aa15□□□□□ -0.01
VEGFB-201ENST00000309422 PFDN2Q9UHV9 154 aa15□□□□□ -0.01
VEGFB-201ENST00000309422 IGHV7-4-1A0A0J9YVY3 117 aa14.99□□□□□ -0.01
VEGFB-201ENST00000309422 MPTX1A8MV57 137 aa14.99□□□□□ -0.01
VEGFB-201ENST00000309422 H3BP45 60 aa14.99□□□□□ -0.01
VEGFB-201ENST00000309422 CCSO14618 274 aa14.99□□□□□ -0.01
VEGFB-201ENST00000309422 C8orf88P0DMB2 117 aa14.99□□□□□ -0.01
VEGFB-201ENST00000309422 TOMM20LQ6UXN7 152 aa14.99□□□□□ -0.01
VEGFB-201ENST00000309422 NPIPB3Q92617 1050 aa14.99□□□□□ -0.01
VEGFB-201ENST00000309422 GRAMD2BQ96HH9 432 aa14.99□□□□□ -0.01
VEGFB-201ENST00000309422 OR10C1Q96KK4 312 aa14.99□□□□□ -0.01
VEGFB-201ENST00000309422 B9D2Q9BPU9 175 aa14.99□□□□□ -0.01
VEGFB-201ENST00000309422 SCAF4O95104 1147 aaKnown RBP14.98□□□□□ -0.01
VEGFB-201ENST00000309422 NPPCP23582 126 aa14.98□□□□□ -0.01
VEGFB-201ENST00000309422 EIF2B2P49770 351 aaKnown RBP14.98□□□□□ -0.01
VEGFB-201ENST00000309422 ID3Q02535 119 aa14.98□□□□□ -0.01
VEGFB-201ENST00000309422 TIGITQ495A1 244 aa14.98□□□□□ -0.01
VEGFB-201ENST00000309422 C11orf87Q6NUJ2 197 aa14.98□□□□□ -0.01
VEGFB-201ENST00000309422 TMEM61Q8N0U2 210 aa14.98□□□□□ -0.01
VEGFB-201ENST00000309422 WDR89Q96FK6 387 aaPredicted RBP14.98□□□□□ -0.01
VEGFB-201ENST00000309422 SPAG8Q99932 426 aaPredicted RBP14.98□□□□□ -0.01
VEGFB-201ENST00000309422 LSM4Q9Y4Z0 139 aaKnown RBP14.98□□□□□ -0.01
VEGFB-201ENST00000309422 SNRPGP15A8MWD9 76 aa14.98□□□□□ -0.01
VEGFB-201ENST00000309422 IGLC1P0CG04 106 aa14.98□□□□□ -0.01
VEGFB-201ENST00000309422 EDN2P20800 178 aa14.98□□□□□ -0.01
VEGFB-201ENST00000309422 NUP62P37198 522 aaPredicted RBP14.98□□□□□ -0.01
VEGFB-201ENST00000309422 YPEL3P61236 119 aaPredicted RBP14.98□□□□□ -0.01
VEGFB-201ENST00000309422 PAFAH1B2P68402 229 aa14.98□□□□□ -0.01
VEGFB-201ENST00000309422 AKR1C1Q04828 323 aa14.98□□□□□ -0.01
VEGFB-201ENST00000309422 MLANAQ16655 118 aa14.98□□□□□ -0.01
VEGFB-201ENST00000309422 ADAMTSL5Q6ZMM2 481 aa14.98□□□□□ -0.01
VEGFB-201ENST00000309422 TMEM170AQ8WVE7 144 aa14.98□□□□□ -0.01
VEGFB-201ENST00000309422 NEURL2Q9BR09 285 aa14.98□□□□□ -0.01
VEGFB-201ENST00000309422 RHPN1-AS1Q9BWJ2 59 aa14.98□□□□□ -0.01
VEGFB-201ENST00000309422 SMPXQ9UHP9 88 aa14.98□□□□□ -0.01
VEGFB-201ENST00000309422 IZUMO1RA6ND01 250 aa14.97□□□□□ -0.01
VEGFB-201ENST00000309422 OR4C46A6NHA9 309 aa14.97□□□□□ -0.01
VEGFB-201ENST00000309422 RD3LP0DJH9 198 aa14.97□□□□□ -0.01
VEGFB-201ENST00000309422 S100A10P60903 97 aa14.97□□□□□ -0.01
VEGFB-201ENST00000309422 IFITM3Q01628 133 aa14.97□□□□□ -0.01
VEGFB-201ENST00000309422 C2orf50Q96LR7 162 aa14.97□□□□□ -0.01
VEGFB-201ENST00000309422 MRPL36Q9P0J6 103 aaKnown RBP14.97□□□□□ -0.01
VEGFB-201ENST00000309422 PRKDCP78527 4128 aaKnown RBP14.96□□□□□ -0.01
VEGFB-201ENST00000309422 SMCO3A2RU48 225 aa14.96□□□□□ -0.02
VEGFB-201ENST00000309422 TSC22D2O75157 780 aa14.96□□□□□ -0.02
VEGFB-201ENST00000309422 TAS2R30P59541 319 aa14.96□□□□□ -0.02
VEGFB-201ENST00000309422 RPL11P62913 178 aaKnown RBP14.96□□□□□ -0.02
VEGFB-201ENST00000309422 SMIM8Q96KF7 97 aa14.96□□□□□ -0.02
VEGFB-201ENST00000309422 MGAT4CQ9UBM8 478 aa14.96□□□□□ -0.02
VEGFB-201ENST00000309422 LSM5Q9Y4Y9 91 aaKnown RBP14.96□□□□□ -0.02
VEGFB-201ENST00000309422 IGHV3-49A0A0A0MS15 119 aa14.95□□□□□ -0.02
VEGFB-201ENST00000309422 TSPAN4O14817 238 aa14.95□□□□□ -0.02
VEGFB-201ENST00000309422 SSNA1O43805 119 aa14.95□□□□□ -0.02
VEGFB-201ENST00000309422 TOMM40O96008 361 aa14.95□□□□□ -0.02
VEGFB-201ENST00000309422 IL4P05112 153 aa14.95□□□□□ -0.02
VEGFB-201ENST00000309422 S100A7P31151 101 aa14.95□□□□□ -0.02
VEGFB-201ENST00000309422 BCAP31P51572 246 aa14.95□□□□□ -0.02
VEGFB-201ENST00000309422 OR8G2PQ6IF36 304 aa14.95□□□□□ -0.02
VEGFB-201ENST00000309422 ZFAND3Q9H8U3 227 aa14.95□□□□□ -0.02
VEGFB-201ENST00000309422 SELENOKQ9Y6D0 94 aa14.95□□□□□ -0.02
VEGFB-201ENST00000309422 CHEK1O14757 476 aa14.94□□□□□ -0.02
VEGFB-201ENST00000309422 PTTG1O95997 202 aa14.94□□□□□ -0.02
VEGFB-201ENST00000309422 IGKV1-17P01599 117 aa14.94□□□□□ -0.02
VEGFB-201ENST00000309422 NHLRC4P0CG21 123 aaPredicted RBP14.94□□□□□ -0.02
VEGFB-201ENST00000309422 IGHV4-30-4P0DP06 118 aa14.94□□□□□ -0.02
VEGFB-201ENST00000309422 GAMTQ14353 236 aa14.94□□□□□ -0.02
VEGFB-201ENST00000309422 OR10P1Q8NGE3 313 aa14.94□□□□□ -0.02
VEGFB-201ENST00000309422 OR51G1Q8NGK1 321 aa14.94□□□□□ -0.02
VEGFB-201ENST00000309422 MARVELD1Q9BSK0 173 aa14.94□□□□□ -0.02
VEGFB-201ENST00000309422 RABAC1Q9UI14 185 aa14.94□□□□□ -0.02
VEGFB-201ENST00000309422 RCL1Q9Y2P8 373 aaKnown RBP14.94□□□□□ -0.02
VEGFB-201ENST00000309422 GOSR2O14653 212 aa14.93□□□□□ -0.02
VEGFB-201ENST00000309422 CFDP00746 253 aaPredicted RBP14.93□□□□□ -0.02
VEGFB-201ENST00000309422 HNRNPCP07910 306 aaKnown RBP eCLIP14.93□□□□□ -0.02
VEGFB-201ENST00000309422 CAV2P51636 162 aa14.93□□□□□ -0.02
VEGFB-201ENST00000309422 ACOT7LQ6ZUV0 252 aa14.93□□□□□ -0.02
VEGFB-201ENST00000309422 PBDC1Q9BVG4 233 aa14.93□□□□□ -0.02
VEGFB-201ENST00000309422 IGHV3OR16-13A0A075B7E8 117 aa14.92□□□□□ -0.02
VEGFB-201ENST00000309422 IGHV3-74A0A0B4J1X5 117 aa14.92□□□□□ -0.02
VEGFB-201ENST00000309422 OR11H12B2RN74 326 aa14.92□□□□□ -0.02
VEGFB-201ENST00000309422 DNASE2O00115 360 aaPredicted RBP14.92□□□□□ -0.02
VEGFB-201ENST00000309422 MBPP02686 304 aaPredicted RBP14.92□□□□□ -0.02
VEGFB-201ENST00000309422 FRMD6-AS1P0C7T7 363 aa14.92□□□□□ -0.02
VEGFB-201ENST00000309422 TCF24Q7RTU0 167 aa14.92□□□□□ -0.02
VEGFB-201ENST00000309422 PPP1R14BQ96C90 147 aa14.92□□□□□ -0.02
VEGFB-201ENST00000309422 RNF2Q99496 336 aa14.92□□□□□ -0.02
VEGFB-201ENST00000309422 HELTA6NFD8 242 aa14.91□□□□□ -0.02
VEGFB-201ENST00000309422 ZNF785A8K8V0 405 aa14.91□□□□□ -0.02
VEGFB-201ENST00000309422 RLN2P04090 185 aa14.91□□□□□ -0.02
VEGFB-201ENST00000309422 METTL15P1P0C7V9 234 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms