RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 ASCL2Q99929 193 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 CHCHD5Q9BSY4 110 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 C1QTNF4Q9BXJ3 329 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 PGLYRP1O75594 196 aaPredicted RBP6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 ZNF506Q5JVG8 444 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 NABP2Q9BQ15 211 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 PRO3102Q9H379 93 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 GGTLC3B5MD39 225 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 CD7P09564 240 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 GNLYP22749 145 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 ZNF672Q499Z4 452 aaPredicted RBP6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 ASCL4Q6XD76 172 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 CIARTQ8N365 385 aaPredicted RBP6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 TTC9CQ8N5M4 171 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 TRAV21A0A0B4J279 112 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 NCMAPQ5T1S8 102 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 PEX7O00628 323 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 SIGLEC5O15389 551 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 ISOC2Q96AB3 205 aa6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 TET2Q6N021 2002 aaPredicted RBP6.98□□□□□ -1.29
PCDHB1-201ENST00000306549 NTN1O95631 604 aa6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 ZNF250P15622 560 aa6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 WNT10AQ9GZT5 417 aa6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 TMEM133Q9H2Q1 129 aa6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 FOXA2Q9Y261 457 aaPredicted RBP6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 TGIF2-C20orf24A0A0A6YYL0 155 aa6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 CYB561D1Q8N8Q1 229 aa6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 ST20Q9HBF5 79 aa6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 IGHV3-35A0A0C4DH35 117 aa6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 E9PQ18 207 aa6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 SAP30O75446 220 aa6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 PLNP26678 52 aa6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 SELENOHQ8IZQ5 122 aaKnown RBP6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 FAM89BQ8N5H3 189 aa6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 A0A1W2PP11 408 aa6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 SAA1P0DJI8 122 aaPredicted RBP6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 KLK2P20151 261 aa6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 MORN3Q6PF18 240 aaPredicted RBP6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 DEPPQ9NTK1 212 aa6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 WNT2P09544 360 aa6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 TMEM252Q8N6L7 170 aa6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 SMIM8Q96KF7 97 aa6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 WFIKKN1Q96NZ8 548 aa6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 SRSF8Q9BRL6 282 aaKnown RBP6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 PARLQ9H300 379 aa6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 GPR132Q9UNW8 380 aa6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 ANKRD17O75179 2603 aaKnown RBP6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 GCM2O75603 506 aaPredicted RBP6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 FOXL2P58012 376 aa6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 DMRTA2Q96SC8 542 aa6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 KLHDC2Q9Y2U9 406 aa6.97□□□□□ -1.29
PCDHB1-201ENST00000306549 A6NNC1 897 aa6.96□□□□□ -1.29
PCDHB1-201ENST00000306549 NBEAP1P0C6P0 100 aa6.96□□□□□ -1.29
PCDHB1-201ENST00000306549 IGHV3OR16-13A0A075B7E8 117 aa6.96□□□□□ -1.29
PCDHB1-201ENST00000306549 IGHV3-74A0A0B4J1X5 117 aa6.96□□□□□ -1.29
PCDHB1-201ENST00000306549 TRAV8-6A0A0B4J262 113 aa6.96□□□□□ -1.29
PCDHB1-201ENST00000306549 SRRM5B3KS81 715 aa6.96□□□□□ -1.29
PCDHB1-201ENST00000306549 TBX6O95947 436 aaPredicted RBP6.96□□□□□ -1.29
PCDHB1-201ENST00000306549 CRYBB3P26998 211 aa6.96□□□□□ -1.29
PCDHB1-201ENST00000306549 GAS1P54826 345 aa6.96□□□□□ -1.29
PCDHB1-201ENST00000306549 FBXL15Q9H469 300 aa6.96□□□□□ -1.29
PCDHB1-201ENST00000306549 IGHV3-49A0A0A0MS15 119 aa6.96□□□□□ -1.29
PCDHB1-201ENST00000306549 RND3P61587 244 aa6.96□□□□□ -1.29
PCDHB1-201ENST00000306549 MS4A6AQ9H2W1 248 aa6.96□□□□□ -1.29
PCDHB1-201ENST00000306549 IGHV1-18A0A0C4DH31 117 aa6.96□□□□□ -1.3
PCDHB1-201ENST00000306549 IGHV3-66A0A0C4DH42 116 aa6.96□□□□□ -1.3
PCDHB1-201ENST00000306549 A0A1B0GUT8 65 aa6.96□□□□□ -1.3
PCDHB1-201ENST00000306549 APOMO95445 188 aa6.96□□□□□ -1.3
PCDHB1-201ENST00000306549 TMEM91Q6ZNR0 172 aa6.96□□□□□ -1.3
PCDHB1-201ENST00000306549 PSMG3Q9BT73 122 aaPredicted RBP6.96□□□□□ -1.3
PCDHB1-201ENST00000306549 EDA2RQ9HAV5 297 aa6.96□□□□□ -1.3
PCDHB1-201ENST00000306549 PTPRBP23467 1997 aa6.96□□□□□ -1.3
PCDHB1-201ENST00000306549 TMEM14DPA8MWL7 114 aa6.96□□□□□ -1.3
PCDHB1-201ENST00000306549 NBR2O15453 112 aa6.96□□□□□ -1.3
PCDHB1-201ENST00000306549 SPNP16150 400 aa6.96□□□□□ -1.3
PCDHB1-201ENST00000306549 SRIP30626 198 aa6.96□□□□□ -1.3
PCDHB1-201ENST00000306549 TRAV14DV4A0A0A6YYC5 116 aa6.96□□□□□ -1.3
PCDHB1-201ENST00000306549 TMEM95Q3KNT9 176 aa6.96□□□□□ -1.3
PCDHB1-201ENST00000306549 SLC25A2Q9BXI2 301 aa6.96□□□□□ -1.3
PCDHB1-201ENST00000306549 CHD8Q9HCK8 2581 aa6.95□□□□□ -1.3
PCDHB1-201ENST00000306549 OR5A1Q8NGJ0 315 aa6.95□□□□□ -1.3
PCDHB1-201ENST00000306549 LEAP2Q969E1 77 aa6.95□□□□□ -1.3
PCDHB1-201ENST00000306549 ST6GAL2Q96JF0 529 aa6.95□□□□□ -1.3
PCDHB1-201ENST00000306549 IGHV3-23P01764 117 aa6.95□□□□□ -1.3
PCDHB1-201ENST00000306549 SRD5A1P18405 259 aa6.95□□□□□ -1.3
PCDHB1-201ENST00000306549 RNF166Q96A37 237 aaPredicted RBP6.95□□□□□ -1.3
PCDHB1-201ENST00000306549 SDHCQ99643 169 aaPredicted RBP6.95□□□□□ -1.3
PCDHB1-201ENST00000306549 ETV2O00321 342 aaPredicted RBP6.95□□□□□ -1.3
PCDHB1-201ENST00000306549 TCF21O43680 179 aa6.95□□□□□ -1.3
PCDHB1-201ENST00000306549 GLIPR1P48060 266 aa6.95□□□□□ -1.3
PCDHB1-201ENST00000306549 NHLRC3Q5JS37 347 aa6.95□□□□□ -1.3
PCDHB1-201ENST00000306549 NR2C2APQ86WQ0 139 aa6.95□□□□□ -1.3
PCDHB1-201ENST00000306549 FER1L6-AS1Q8NA97 138 aa6.95□□□□□ -1.3
PCDHB1-201ENST00000306549 PAX2Q02962 417 aa6.95□□□□□ -1.3
PCDHB1-201ENST00000306549 FN1P02751 2386 aaKnown RBP6.95□□□□□ -1.3
PCDHB1-201ENST00000306549 CXorf65A6NEN9 183 aa6.95□□□□□ -1.3
PCDHB1-201ENST00000306549 A0A087WV48 116 aa6.95□□□□□ -1.3
PCDHB1-201ENST00000306549 FHITP49789 147 aa6.95□□□□□ -1.3
PCDHB1-201ENST00000306549 ZP1P60852 638 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms