RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 A0A1B0GUT8 65 aa10.93□□□□□ -0.66
DDX54-201ENST00000306014 DLEU1O43261 78 aa10.93□□□□□ -0.66
DDX54-201ENST00000306014 DKK1O94907 266 aa10.93□□□□□ -0.66
DDX54-201ENST00000306014 PNKDQ8N490 385 aa10.93□□□□□ -0.66
DDX54-201ENST00000306014 NUDT10Q8NFP7 164 aa10.93□□□□□ -0.66
DDX54-201ENST00000306014 NUDT11Q96G61 164 aa10.93□□□□□ -0.66
DDX54-201ENST00000306014 CLEC7AQ9BXN2 247 aa10.93□□□□□ -0.66
DDX54-201ENST00000306014 TRAV9-2A0A087WT02 112 aa10.93□□□□□ -0.66
DDX54-201ENST00000306014 F5H697 171 aa10.93□□□□□ -0.66
DDX54-201ENST00000306014 GOSR1O95249 250 aa10.93□□□□□ -0.66
DDX54-201ENST00000306014 RBPMS2Q6ZRY4 209 aaKnown RBP10.93□□□□□ -0.66
DDX54-201ENST00000306014 C1RLQ9NZP8 487 aa10.93□□□□□ -0.66
DDX54-201ENST00000306014 RPUSD1Q9UJJ7 312 aaKnown RBP10.93□□□□□ -0.66
DDX54-201ENST00000306014 F11RQ9Y624 299 aaKnown RBP10.93□□□□□ -0.66
DDX54-201ENST00000306014 TCRBV4S1A1TA0A5B7 111 aa10.92□□□□□ -0.66
DDX54-201ENST00000306014 SFTPCP11686 197 aa10.92□□□□□ -0.66
DDX54-201ENST00000306014 Q8NFD4 153 aa10.92□□□□□ -0.66
DDX54-201ENST00000306014 PLCE1Q9P212 2302 aa10.92□□□□□ -0.66
DDX54-201ENST00000306014 PRR14LQ5THK1 2151 aa10.92□□□□□ -0.66
DDX54-201ENST00000306014 IGHV1-69-2A0A0G2JMI3 117 aa10.92□□□□□ -0.66
DDX54-201ENST00000306014 CX3CL1P78423 397 aa10.92□□□□□ -0.66
DDX54-201ENST00000306014 SPANXN1Q5VSR9 72 aa10.92□□□□□ -0.66
DDX54-201ENST00000306014 LINC00479Q96M42 142 aa10.92□□□□□ -0.66
DDX54-201ENST00000306014 COL25A1Q9BXS0 654 aaPredicted RBP10.92□□□□□ -0.66
DDX54-201ENST00000306014 C17orf100A8MU93 164 aa10.92□□□□□ -0.66
DDX54-201ENST00000306014 C3orf79P0CE67 100 aa10.92□□□□□ -0.66
DDX54-201ENST00000306014 MEF2CQ06413 473 aaPredicted RBP10.92□□□□□ -0.66
DDX54-201ENST00000306014 RALYQ9UKM9 306 aaKnown RBP10.92□□□□□ -0.66
DDX54-201ENST00000306014 GPX1P07203 203 aa10.91□□□□□ -0.66
DDX54-201ENST00000306014 GCSHP23434 173 aa10.91□□□□□ -0.66
DDX54-201ENST00000306014 CDKN1AP38936 164 aa10.91□□□□□ -0.66
DDX54-201ENST00000306014 ERVK11-1P61568 191 aa10.91□□□□□ -0.66
DDX54-201ENST00000306014 MBNL2Q5VZF2 373 aaKnown RBP10.91□□□□□ -0.66
DDX54-201ENST00000306014 IGHV1-46P01743 117 aa10.91□□□□□ -0.66
DDX54-201ENST00000306014 BMI1P35226 326 aa10.91□□□□□ -0.66
DDX54-201ENST00000306014 BSPH1Q075Z2 132 aa10.91□□□□□ -0.66
DDX54-201ENST00000306014 Q6ZSR3 168 aa10.91□□□□□ -0.66
DDX54-201ENST00000306014 MYOZ3Q8TDC0 251 aa10.91□□□□□ -0.66
DDX54-201ENST00000306014 ZNF257Q9Y2Q1 563 aa10.91□□□□□ -0.66
DDX54-201ENST00000306014 TYMSP04818 313 aa10.91□□□□□ -0.66
DDX54-201ENST00000306014 MFAP4P55083 255 aa10.91□□□□□ -0.66
DDX54-201ENST00000306014 NIT1Q86X76 327 aa10.91□□□□□ -0.66
DDX54-201ENST00000306014 FMC1Q96HJ9 113 aa10.91□□□□□ -0.66
DDX54-201ENST00000306014 IGKV1-16P04430 117 aa10.91□□□□□ -0.66
DDX54-201ENST00000306014 TDGF1P3P51864 188 aa10.91□□□□□ -0.66
DDX54-201ENST00000306014 SCGB1D4Q6XE38 83 aa10.91□□□□□ -0.66
DDX54-201ENST00000306014 TSKUQ8WUA8 353 aa10.91□□□□□ -0.66
DDX54-201ENST00000306014 TMEM208Q9BTX3 173 aa10.91□□□□□ -0.66
DDX54-201ENST00000306014 LMO1P25800 156 aa10.9□□□□□ -0.66
DDX54-201ENST00000306014 RELQ04864 619 aaPredicted RBP10.9□□□□□ -0.66
DDX54-201ENST00000306014 C2orf83Q53S99 150 aa10.9□□□□□ -0.66
DDX54-201ENST00000306014 ZNF788Q6ZQV5 615 aa10.9□□□□□ -0.66
DDX54-201ENST00000306014 C18orf15Q96N68 181 aa10.9□□□□□ -0.66
DDX54-201ENST00000306014 PET117Q6UWS5 81 aa10.9□□□□□ -0.66
DDX54-201ENST00000306014 IGHV3OR16-8A0A075B7F1 116 aa10.9□□□□□ -0.67
DDX54-201ENST00000306014 SCGB1C2P0DMR2 95 aa10.9□□□□□ -0.67
DDX54-201ENST00000306014 CCDC144NLQ6NUI1 221 aa10.9□□□□□ -0.67
DDX54-201ENST00000306014 ZNF841Q6ZN19 808 aa10.9□□□□□ -0.67
DDX54-201ENST00000306014 LPAR2Q9HBW0 351 aa10.9□□□□□ -0.67
DDX54-201ENST00000306014 TEX45Q8NA69 505 aa10.89□□□□□ -0.67
DDX54-201ENST00000306014 PLSCR4Q9NRQ2 329 aa10.89□□□□□ -0.67
DDX54-201ENST00000306014 ZNRD1Q9P1U0 126 aa10.89□□□□□ -0.67
DDX54-201ENST00000306014 IGHV3OR16-13A0A075B7E8 117 aa10.89□□□□□ -0.67
DDX54-201ENST00000306014 IGHV3-74A0A0B4J1X5 117 aa10.89□□□□□ -0.67
DDX54-201ENST00000306014 LINC00614P0C842 121 aa10.89□□□□□ -0.67
DDX54-201ENST00000306014 UNQ5815/PRO19632Q6UWF5 114 aa10.89□□□□□ -0.67
DDX54-201ENST00000306014 LY96Q9Y6Y9 160 aa10.89□□□□□ -0.67
DDX54-201ENST00000306014 F2RL2O00254 374 aa10.89□□□□□ -0.67
DDX54-201ENST00000306014 IGKV3-15P01624 115 aa10.89□□□□□ -0.67
DDX54-201ENST00000306014 RPL7P18124 248 aaKnown RBP10.89□□□□□ -0.67
DDX54-201ENST00000306014 WFDC3Q8IUB2 231 aa10.89□□□□□ -0.67
DDX54-201ENST00000306014 SOX21Q9Y651 276 aaPredicted RBP10.89□□□□□ -0.67
DDX54-201ENST00000306014 IGHV3-23P01764 117 aa10.88□□□□□ -0.67
DDX54-201ENST00000306014 Q6ZR03 302 aa10.88□□□□□ -0.67
DDX54-201ENST00000306014 MAP1LC3AQ9H492 121 aa10.88□□□□□ -0.67
DDX54-201ENST00000306014 MGPP08493 103 aa10.88□□□□□ -0.67
DDX54-201ENST00000306014 PLA2G2CQ5R387 149 aa10.88□□□□□ -0.67
DDX54-201ENST00000306014 UNQ6494/PRO21346Q6UXR6 183 aa10.88□□□□□ -0.67
DDX54-201ENST00000306014 PRELID3AQ96N28 172 aa10.88□□□□□ -0.67
DDX54-201ENST00000306014 ALKBH7Q9BT30 221 aaPredicted RBP10.88□□□□□ -0.67
DDX54-201ENST00000306014 Q6ZWC4 215 aa10.88□□□□□ -0.67
DDX54-201ENST00000306014 NUP35Q8NFH5 326 aa10.88□□□□□ -0.67
DDX54-201ENST00000306014 SLC25A15Q9Y619 301 aa10.88□□□□□ -0.67
DDX54-201ENST00000306014 FABP2P12104 132 aa10.88□□□□□ -0.67
DDX54-201ENST00000306014 ZNF414Q96IQ9 312 aa10.88□□□□□ -0.67
DDX54-201ENST00000306014 CCL21O00585 134 aa10.87□□□□□ -0.67
DDX54-201ENST00000306014 SRSF6Q13247 344 aaKnown RBP10.87□□□□□ -0.67
DDX54-201ENST00000306014 Q1RN00 199 aa10.87□□□□□ -0.67
DDX54-201ENST00000306014 TMEM78Q5T7P6 136 aa10.87□□□□□ -0.67
DDX54-201ENST00000306014 KIR3DL3Q8N743 410 aa10.87□□□□□ -0.67
DDX54-201ENST00000306014 FBXL7Q9UJT9 491 aa10.87□□□□□ -0.67
DDX54-201ENST00000306014 C7orf71A4D174 169 aa10.87□□□□□ -0.67
DDX54-201ENST00000306014 FAM181BA6NEQ2 426 aa10.87□□□□□ -0.67
DDX54-201ENST00000306014 CRIP3Q6Q6R5 217 aa10.87□□□□□ -0.67
DDX54-201ENST00000306014 PEF1Q9UBV8 284 aaKnown RBP10.87□□□□□ -0.67
DDX54-201ENST00000306014 TRAV30A0A087WSZ9 112 aa10.87□□□□□ -0.67
DDX54-201ENST00000306014 VDAC2P45880 294 aaPredicted RBP10.87□□□□□ -0.67
DDX54-201ENST00000306014 SRSF9Q13242 221 aaKnown RBP eCLIP10.87□□□□□ -0.67
DDX54-201ENST00000306014 A1L4Q6 167 aa10.86□□□□□ -0.67
DDX54-201ENST00000306014 M0QZ24 198 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms