RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 ASCL4Q6XD76 172 aa10.64□□□□□ -0.71
COL3A1-201ENST00000304636 SMPXQ9UHP9 88 aa10.64□□□□□ -0.71
COL3A1-201ENST00000304636 CEACAM4O75871 244 aa10.64□□□□□ -0.71
COL3A1-201ENST00000304636 DNAL4O96015 105 aa10.64□□□□□ -0.71
COL3A1-201ENST00000304636 NUP37Q8NFH4 326 aa10.64□□□□□ -0.71
COL3A1-201ENST00000304636 RAX2Q96IS3 184 aa10.64□□□□□ -0.71
COL3A1-201ENST00000304636 FREM3P0C091 2139 aa10.64□□□□□ -0.71
COL3A1-201ENST00000304636 FAM27E3Q08E93 113 aa10.64□□□□□ -0.71
COL3A1-201ENST00000304636 GGNQ86UU5 652 aa10.64□□□□□ -0.71
COL3A1-201ENST00000304636 ZSWIM8A7E2V4 1837 aa10.64□□□□□ -0.71
COL3A1-201ENST00000304636 HOXA3O43365 443 aaPredicted RBP10.63□□□□□ -0.71
COL3A1-201ENST00000304636 FOXH1O75593 365 aa10.63□□□□□ -0.71
COL3A1-201ENST00000304636 TFF1P04155 84 aa10.63□□□□□ -0.71
COL3A1-201ENST00000304636 CCL3L1P16619 93 aa10.63□□□□□ -0.71
COL3A1-201ENST00000304636 NPFFO15130 113 aa10.63□□□□□ -0.71
COL3A1-201ENST00000304636 C20orf144Q9BQM9 153 aa10.63□□□□□ -0.71
COL3A1-201ENST00000304636 C17orf100A8MU93 164 aa10.63□□□□□ -0.71
COL3A1-201ENST00000304636 MRAP2Q96G30 205 aa10.63□□□□□ -0.71
COL3A1-201ENST00000304636 ZNF479Q96JC4 524 aa10.63□□□□□ -0.71
COL3A1-201ENST00000304636 SLC50A1Q9BRV3 221 aa10.63□□□□□ -0.71
COL3A1-201ENST00000304636 IGHV3-66A0A0C4DH42 116 aa10.63□□□□□ -0.71
COL3A1-201ENST00000304636 PPP1R27Q86WC6 154 aa10.63□□□□□ -0.71
COL3A1-201ENST00000304636 MESP1Q9BRJ9 268 aa10.63□□□□□ -0.71
COL3A1-201ENST00000304636 TET1Q8NFU7 2136 aa10.63□□□□□ -0.71
COL3A1-201ENST00000304636 PAX1P15863 534 aa10.62□□□□□ -0.71
COL3A1-201ENST00000304636 CLEC2AQ6UVW9 174 aa10.62□□□□□ -0.71
COL3A1-201ENST00000304636 HEATR5BQ9P2D3 2071 aa10.62□□□□□ -0.71
COL3A1-201ENST00000304636 PFN1P07737 140 aaKnown RBP10.62□□□□□ -0.71
COL3A1-201ENST00000304636 ZNF883P0CG24 379 aa10.62□□□□□ -0.71
COL3A1-201ENST00000304636 Q0VG73 95 aa10.62□□□□□ -0.71
COL3A1-201ENST00000304636 POLR3KQ9Y2Y1 108 aaPredicted RBP10.62□□□□□ -0.71
COL3A1-201ENST00000304636 FAM186AA6NE01 2351 aa10.62□□□□□ -0.71
COL3A1-201ENST00000304636 RRN3P1Q2M238 152 aa10.62□□□□□ -0.71
COL3A1-201ENST00000304636 C9orf106Q8NAJ2 232 aa10.62□□□□□ -0.71
COL3A1-201ENST00000304636 DMRTA2Q96SC8 542 aa10.62□□□□□ -0.71
COL3A1-201ENST00000304636 A0A0G2JRQ6 117 aa10.62□□□□□ -0.71
COL3A1-201ENST00000304636 TMEM262E9PQX1 116 aa10.62□□□□□ -0.71
COL3A1-201ENST00000304636 TRGV3P03979 118 aa10.62□□□□□ -0.71
COL3A1-201ENST00000304636 FOXL2NBQ6ZUU3 175 aa10.62□□□□□ -0.71
COL3A1-201ENST00000304636 NUP35Q8NFH5 326 aa10.62□□□□□ -0.71
COL3A1-201ENST00000304636 F2Z2F3 143 aa10.62□□□□□ -0.71
COL3A1-201ENST00000304636 UCNP55089 124 aa10.62□□□□□ -0.71
COL3A1-201ENST00000304636 CFHR1Q03591 330 aa10.62□□□□□ -0.71
COL3A1-201ENST00000304636 ORMDL2Q53FV1 153 aa10.62□□□□□ -0.71
COL3A1-201ENST00000304636 MPV17L2Q567V2 206 aa10.62□□□□□ -0.71
COL3A1-201ENST00000304636 LCN12Q6JVE5 192 aa10.62□□□□□ -0.71
COL3A1-201ENST00000304636 MOB4Q9Y3A3 225 aa10.62□□□□□ -0.71
COL3A1-201ENST00000304636 A0A0G2JLM5 398 aa10.61□□□□□ -0.71
COL3A1-201ENST00000304636 NBR2O15453 112 aa10.61□□□□□ -0.71
COL3A1-201ENST00000304636 PSPNO60542 156 aa10.61□□□□□ -0.71
COL3A1-201ENST00000304636 OR10W1Q8NGF6 305 aa10.61□□□□□ -0.71
COL3A1-201ENST00000304636 IGHV3-49A0A0A0MS15 119 aa10.61□□□□□ -0.71
COL3A1-201ENST00000304636 TRAV8-2A0A0B4J237 113 aa10.61□□□□□ -0.71
COL3A1-201ENST00000304636 SUMO2P61956 95 aaKnown RBP10.61□□□□□ -0.71
COL3A1-201ENST00000304636 ZNF581Q9P0T4 197 aa10.61□□□□□ -0.71
COL3A1-201ENST00000304636 NTF4P34130 210 aa10.61□□□□□ -0.71
COL3A1-201ENST00000304636 GAGE13Q4V321 117 aa10.61□□□□□ -0.71
COL3A1-201ENST00000304636 TMEM133Q9H2Q1 129 aa10.61□□□□□ -0.71
COL3A1-201ENST00000304636 TNFRSF18Q9Y5U5 241 aa10.61□□□□□ -0.71
COL3A1-201ENST00000304636 SYS1-DBNDD2H3BUS1 97 aa10.61□□□□□ -0.71
COL3A1-201ENST00000304636 TP53BP1Q12888 1972 aaPredicted RBP10.6□□□□□ -0.71
COL3A1-201ENST00000304636 PINLYPA6NC86 204 aa10.6□□□□□ -0.71
COL3A1-201ENST00000304636 C15orf62A8K5M9 175 aa10.6□□□□□ -0.71
COL3A1-201ENST00000304636 Q6ZRM9 215 aa10.6□□□□□ -0.71
COL3A1-201ENST00000304636 VKORC1Q9BQB6 163 aa10.6□□□□□ -0.71
COL3A1-201ENST00000304636 SRRM5B3KS81 715 aa10.6□□□□□ -0.71
COL3A1-201ENST00000304636 BSPH1Q075Z2 132 aa10.6□□□□□ -0.71
COL3A1-201ENST00000304636 Q6P435 159 aa10.6□□□□□ -0.71
COL3A1-201ENST00000304636 C17orf82Q86X59 251 aaPredicted RBP10.6□□□□□ -0.71
COL3A1-201ENST00000304636 TEX29Q8N6K0 151 aa10.6□□□□□ -0.71
COL3A1-201ENST00000304636 hDV102S1A0JD36 115 aa10.6□□□□□ -0.71
COL3A1-201ENST00000304636 TGFAP01135 160 aa10.6□□□□□ -0.71
COL3A1-201ENST00000304636 C5orf24Q7Z6I8 188 aa10.6□□□□□ -0.71
COL3A1-201ENST00000304636 BMPERQ8N8U9 685 aa10.6□□□□□ -0.71
COL3A1-201ENST00000304636 RSPO3Q9BXY4 272 aaPredicted RBP10.6□□□□□ -0.71
COL3A1-201ENST00000304636 CHTOPQ9Y3Y2 248 aaKnown RBP10.6□□□□□ -0.71
COL3A1-201ENST00000304636 H3BRM9 83 aa10.6□□□□□ -0.71
COL3A1-201ENST00000304636 CD33P20138 364 aa10.6□□□□□ -0.71
COL3A1-201ENST00000304636 GUSBP1Q15486 140 aa10.6□□□□□ -0.71
COL3A1-201ENST00000304636 RPUSD1Q9UJJ7 312 aaKnown RBP10.6□□□□□ -0.71
COL3A1-201ENST00000304636 DOCK6Q96HP0 2047 aa10.6□□□□□ -0.71
COL3A1-201ENST00000304636 RPRMLQ8N4K4 120 aa10.59□□□□□ -0.71
COL3A1-201ENST00000304636 SNHG12Q9BXW3 62 aa10.59□□□□□ -0.71
COL3A1-201ENST00000304636 TCRAP04437 139 aa10.59□□□□□ -0.71
COL3A1-201ENST00000304636 FAM71F2Q6NXP2 309 aa10.59□□□□□ -0.71
COL3A1-201ENST00000304636 PLXNA3P51805 1871 aa10.59□□□□□ -0.71
COL3A1-201ENST00000304636 IGHV1-18A0A0C4DH31 117 aa10.59□□□□□ -0.71
COL3A1-201ENST00000304636 GFRA3O60609 400 aa10.59□□□□□ -0.71
COL3A1-201ENST00000304636 SP9P0CG40 484 aa10.59□□□□□ -0.71
COL3A1-201ENST00000304636 FOXG1P55316 489 aaPredicted RBP10.59□□□□□ -0.71
COL3A1-201ENST00000304636 COX11Q9Y6N1 276 aa10.59□□□□□ -0.71
COL3A1-201ENST00000304636 CLEC19AQ6UXS0 136 aa10.59□□□□□ -0.71
COL3A1-201ENST00000304636 DUX5Q96PT3 197 aa10.59□□□□□ -0.71
COL3A1-201ENST00000304636 FNDC10F2Z333 226 aa10.59□□□□□ -0.71
COL3A1-201ENST00000304636 LY6EQ16553 131 aa10.59□□□□□ -0.71
COL3A1-201ENST00000304636 ANAPC13Q9BS18 74 aa10.59□□□□□ -0.71
COL3A1-201ENST00000304636 IGHV3OR16-12A0A075B7B8 117 aa10.58□□□□□ -0.72
COL3A1-201ENST00000304636 TRAV3A0A0B4J244 114 aa10.58□□□□□ -0.72
COL3A1-201ENST00000304636 LINC00473A8K010 186 aa10.58□□□□□ -0.72
COL3A1-201ENST00000304636 CD5LO43866 347 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms