RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 IMMP2LQ96T52 175 aa15.4■□□□□ 0.06
HOXC4-201ENST00000303406 URGCP-MRPS24S4R325 110 aa15.4■□□□□ 0.06
HOXC4-201ENST00000303406 NAV3Q8IVL0 2385 aa15.4■□□□□ 0.06
HOXC4-201ENST00000303406 IGHV3-48P01763 117 aa15.39■□□□□ 0.05
HOXC4-201ENST00000303406 UBE2L3P68036 154 aaKnown RBP15.39■□□□□ 0.05
HOXC4-201ENST00000303406 C19orf35Q6ZS72 473 aa15.39■□□□□ 0.05
HOXC4-201ENST00000303406 TTC9CQ8N5M4 171 aa15.39■□□□□ 0.05
HOXC4-201ENST00000303406 ZNF48Q96MX3 618 aaPredicted RBP15.39■□□□□ 0.05
HOXC4-201ENST00000303406 PAXXQ9BUH6 204 aa15.39■□□□□ 0.05
HOXC4-201ENST00000303406 DERL1Q9BUN8 251 aa15.39■□□□□ 0.05
HOXC4-201ENST00000303406 K7EIM0 57 aa15.38■□□□□ 0.05
HOXC4-201ENST00000303406 HYPMO75409 117 aa15.38■□□□□ 0.05
HOXC4-201ENST00000303406 APELAP0DMC3 54 aa15.38■□□□□ 0.05
HOXC4-201ENST00000303406 PAX1P15863 534 aa15.38■□□□□ 0.05
HOXC4-201ENST00000303406 CX3CL1P78423 397 aa15.38■□□□□ 0.05
HOXC4-201ENST00000303406 SMUG1Q53HV7 270 aa15.38■□□□□ 0.05
HOXC4-201ENST00000303406 RUSC1-AS1Q66K80 236 aa15.38■□□□□ 0.05
HOXC4-201ENST00000303406 C2CD4CQ8TF44 421 aa15.38■□□□□ 0.05
HOXC4-201ENST00000303406 BTF3L4Q96K17 158 aa15.38■□□□□ 0.05
HOXC4-201ENST00000303406 OR51M1Q9H341 326 aa15.38■□□□□ 0.05
HOXC4-201ENST00000303406 SAV1Q9H4B6 383 aaPredicted RBP15.38■□□□□ 0.05
HOXC4-201ENST00000303406 CD24P25063 80 aa15.38■□□□□ 0.05
HOXC4-201ENST00000303406 GALR1P47211 349 aa15.38■□□□□ 0.05
HOXC4-201ENST00000303406 FBLN7Q53RD9 439 aa15.38■□□□□ 0.05
HOXC4-201ENST00000303406 MORN5Q5VZ52 161 aa15.38■□□□□ 0.05
HOXC4-201ENST00000303406 CLEC2AQ6UVW9 174 aa15.38■□□□□ 0.05
HOXC4-201ENST00000303406 LINC00305Q7Z4B0 112 aa15.38■□□□□ 0.05
HOXC4-201ENST00000303406 TMEM190Q8WZ59 177 aa15.38■□□□□ 0.05
HOXC4-201ENST00000303406 TRBV20OR9-2A0A075B6H5 130 aa15.37■□□□□ 0.05
HOXC4-201ENST00000303406 TRAV5A0A0B4J249 113 aa15.37■□□□□ 0.05
HOXC4-201ENST00000303406 C5orf52A6NGY3 159 aa15.37■□□□□ 0.05
HOXC4-201ENST00000303406 GGTLC3B5MD39 225 aa15.37■□□□□ 0.05
HOXC4-201ENST00000303406 NPFFO15130 113 aa15.37■□□□□ 0.05
HOXC4-201ENST00000303406 HLA-DRB1P01911 266 aa15.37■□□□□ 0.05
HOXC4-201ENST00000303406 S100A6P06703 90 aa15.37■□□□□ 0.05
HOXC4-201ENST00000303406 PLXNB1O43157 2135 aa15.36■□□□□ 0.05
HOXC4-201ENST00000303406 IGLV11-55A0A075B6I3 123 aa15.36■□□□□ 0.05
HOXC4-201ENST00000303406 TRAV30A0A087WSZ9 112 aa15.36■□□□□ 0.05
HOXC4-201ENST00000303406 MDFIC2A0A1B0GVS7 189 aa15.36■□□□□ 0.05
HOXC4-201ENST00000303406 RNF224P0DH78 156 aa15.36■□□□□ 0.05
HOXC4-201ENST00000303406 SAA4P35542 130 aa15.36■□□□□ 0.05
HOXC4-201ENST00000303406 DSCR9P59020 149 aa15.36■□□□□ 0.05
HOXC4-201ENST00000303406 KLK9Q2XQG4 91 aa15.36■□□□□ 0.05
HOXC4-201ENST00000303406 ASPHD1Q5U4P2 390 aa15.36■□□□□ 0.05
HOXC4-201ENST00000303406 Q8N9W7 124 aa15.36■□□□□ 0.05
HOXC4-201ENST00000303406 OR1B1Q8NGR6 318 aa15.36■□□□□ 0.05
HOXC4-201ENST00000303406 FXYD5Q96DB9 178 aa15.36■□□□□ 0.05
HOXC4-201ENST00000303406 KLK9Q9UKQ9 250 aa15.36■□□□□ 0.05
HOXC4-201ENST00000303406 NCBP2LA6PVI3 153 aaKnown RBP15.35■□□□□ 0.05
HOXC4-201ENST00000303406 GGCTO75223 188 aaKnown RBP15.35■□□□□ 0.05
HOXC4-201ENST00000303406 OR10J4P0C629 311 aa15.35■□□□□ 0.05
HOXC4-201ENST00000303406 RPL35P42766 123 aaKnown RBP15.35■□□□□ 0.05
HOXC4-201ENST00000303406 KCNIP4Q6PIL6 250 aa15.35■□□□□ 0.05
HOXC4-201ENST00000303406 SFRP2Q96HF1 295 aa15.35■□□□□ 0.05
HOXC4-201ENST00000303406 RASL11BQ9BPW5 248 aa15.35■□□□□ 0.05
HOXC4-201ENST00000303406 SRD5A3Q9H8P0 318 aa15.35■□□□□ 0.05
HOXC4-201ENST00000303406 IGHV4-61A0A0C4DH41 118 aa15.34■□□□□ 0.05
HOXC4-201ENST00000303406 CENPVL3A0A0U1RRI6 287 aa15.34■□□□□ 0.05
HOXC4-201ENST00000303406 HELTA6NFD8 242 aa15.34■□□□□ 0.05
HOXC4-201ENST00000303406 UBE2CO00762 179 aa15.34■□□□□ 0.05
HOXC4-201ENST00000303406 ORM2P19652 201 aa15.34■□□□□ 0.05
HOXC4-201ENST00000303406 ATP5J2P56134 94 aa15.34■□□□□ 0.05
HOXC4-201ENST00000303406 OCC1Q8TAD7 63 aa15.34■□□□□ 0.05
HOXC4-201ENST00000303406 FANCD2OSQ96PS1 177 aa15.34■□□□□ 0.05
HOXC4-201ENST00000303406 HIGD1AQ9Y241 93 aa15.34■□□□□ 0.05
HOXC4-201ENST00000303406 IGHV3-21A0A0B4J1V1 117 aa15.33■□□□□ 0.05
HOXC4-201ENST00000303406 IGHV7-81A0A0B4J1V7 117 aa15.33■□□□□ 0.05
HOXC4-201ENST00000303406 TYMSP04818 313 aa15.33■□□□□ 0.05
HOXC4-201ENST00000303406 PSG1P11464 419 aa15.33■□□□□ 0.05
HOXC4-201ENST00000303406 CRYBB3P26998 211 aa15.33■□□□□ 0.05
HOXC4-201ENST00000303406 TAS2R60P59551 318 aa15.33■□□□□ 0.05
HOXC4-201ENST00000303406 SUMO1P63165 101 aaKnown RBP15.33■□□□□ 0.05
HOXC4-201ENST00000303406 NDPQ00604 133 aa15.33■□□□□ 0.05
HOXC4-201ENST00000303406 RBM14Q96PK6 669 aaKnown RBP15.33■□□□□ 0.05
HOXC4-201ENST00000303406 FAM103A1Q9BTL3 118 aaKnown RBP15.33■□□□□ 0.05
HOXC4-201ENST00000303406 THYN1Q9P016 225 aa15.33■□□□□ 0.05
HOXC4-201ENST00000303406 TMEM14CQ9P0S9 112 aa15.33■□□□□ 0.05
HOXC4-201ENST00000303406 AP4M1O00189 453 aa15.33■□□□□ 0.04
HOXC4-201ENST00000303406 TOMM40O96008 361 aa15.33■□□□□ 0.04
HOXC4-201ENST00000303406 IGKV1-17P01599 117 aa15.33■□□□□ 0.04
HOXC4-201ENST00000303406 PYYP10082 97 aa15.33■□□□□ 0.04
HOXC4-201ENST00000303406 MYCNOSP40205 109 aa15.33■□□□□ 0.04
HOXC4-201ENST00000303406 YPEL3P61236 119 aaPredicted RBP15.33■□□□□ 0.04
HOXC4-201ENST00000303406 FOXL1Q12952 345 aa15.33■□□□□ 0.04
HOXC4-201ENST00000303406 TIGITQ495A1 244 aa15.33■□□□□ 0.04
HOXC4-201ENST00000303406 TEX38Q6PEX7 206 aa15.33■□□□□ 0.04
HOXC4-201ENST00000303406 ZNF843Q8N446 348 aa15.33■□□□□ 0.04
HOXC4-201ENST00000303406 BBC3Q96PG8 261 aaPredicted RBP15.33■□□□□ 0.04
HOXC4-201ENST00000303406 ELOVL1Q9BW60 279 aa15.33■□□□□ 0.04
HOXC4-201ENST00000303406 MRPL27Q9P0M9 148 aaKnown RBP15.33■□□□□ 0.04
HOXC4-201ENST00000303406 LRBAP50851 2863 aa15.32■□□□□ 0.04
HOXC4-201ENST00000303406 HIST1H1BP16401 226 aaKnown RBP15.32■□□□□ 0.04
HOXC4-201ENST00000303406 FCGR2BP31994 310 aaPredicted RBP15.32■□□□□ 0.04
HOXC4-201ENST00000303406 MFAP4P55083 255 aa15.32■□□□□ 0.04
HOXC4-201ENST00000303406 SNRPEP62304 92 aaKnown RBP15.32■□□□□ 0.04
HOXC4-201ENST00000303406 OR10G8Q8NGN5 311 aa15.32■□□□□ 0.04
HOXC4-201ENST00000303406 TMEM68Q96MH6 324 aa15.32■□□□□ 0.04
HOXC4-201ENST00000303406 TRAV9-1A0A075B6T8 112 aa15.31■□□□□ 0.04
HOXC4-201ENST00000303406 RD3LP0DJH9 198 aa15.31■□□□□ 0.04
HOXC4-201ENST00000303406 EGR2P11161 476 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms