RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 CLN5O75503 358 aa10.18□□□□□ -0.78
CCDC7-202ENST00000302316 FGF8P55075 233 aaPredicted RBP10.18□□□□□ -0.78
CCDC7-202ENST00000302316 SELENOTP62341 195 aa10.18□□□□□ -0.78
CCDC7-202ENST00000302316 CCL20P78556 96 aa10.18□□□□□ -0.78
CCDC7-202ENST00000302316 C19orf54Q5BKX5 351 aa10.18□□□□□ -0.78
CCDC7-202ENST00000302316 COMMD1Q8N668 190 aa10.18□□□□□ -0.78
CCDC7-202ENST00000302316 RAB24Q969Q5 203 aa10.18□□□□□ -0.78
CCDC7-202ENST00000302316 ACANP16112 2415 aa10.17□□□□□ -0.78
CCDC7-202ENST00000302316 TRAV1-1A0A0B4J248 108 aa10.17□□□□□ -0.78
CCDC7-202ENST00000302316 SEC14L6B5MCN3 397 aa10.17□□□□□ -0.78
CCDC7-202ENST00000302316 AP4M1O00189 453 aa10.17□□□□□ -0.78
CCDC7-202ENST00000302316 IGLC1P0CG04 106 aa10.17□□□□□ -0.78
CCDC7-202ENST00000302316 RHOGP84095 191 aa10.17□□□□□ -0.78
CCDC7-202ENST00000302316 NOL4LQ96MY1 436 aaPredicted RBP10.17□□□□□ -0.78
CCDC7-202ENST00000302316 C21orf62Q9NYP8 219 aa10.17□□□□□ -0.78
CCDC7-202ENST00000302316 OTOGQ6ZRI0 2925 aa10.17□□□□□ -0.78
CCDC7-202ENST00000302316 NPBWR1P48145 328 aa10.16□□□□□ -0.78
CCDC7-202ENST00000302316 MFAP4P55083 255 aa10.16□□□□□ -0.78
CCDC7-202ENST00000302316 Q56UQ5 140 aa10.16□□□□□ -0.78
CCDC7-202ENST00000302316 RBMS3Q6XE24 437 aaKnown RBP10.16□□□□□ -0.78
CCDC7-202ENST00000302316 MS4A10Q96PG2 267 aa10.16□□□□□ -0.78
CCDC7-202ENST00000302316 DUX5Q96PT3 197 aa10.16□□□□□ -0.78
CCDC7-202ENST00000302316 SMR3AQ99954 134 aa10.16□□□□□ -0.78
CCDC7-202ENST00000302316 TMEM231Q9H6L2 316 aa10.16□□□□□ -0.78
CCDC7-202ENST00000302316 TRBV9A0A0B4J1U6 114 aa10.16□□□□□ -0.78
CCDC7-202ENST00000302316 GNG7O60262 68 aa10.16□□□□□ -0.78
CCDC7-202ENST00000302316 IGHV3-23P01764 117 aa10.16□□□□□ -0.78
CCDC7-202ENST00000302316 RHOBP62745 196 aa10.16□□□□□ -0.78
CCDC7-202ENST00000302316 SRSF3P84103 164 aaKnown RBP10.16□□□□□ -0.78
CCDC7-202ENST00000302316 KLK9Q2XQG4 91 aa10.16□□□□□ -0.78
CCDC7-202ENST00000302316 C15orf32Q32M92 178 aa10.16□□□□□ -0.78
CCDC7-202ENST00000302316 TOR2AQ5JU69 321 aa10.16□□□□□ -0.78
CCDC7-202ENST00000302316 UQCC3Q6UW78 93 aa10.16□□□□□ -0.78
CCDC7-202ENST00000302316 NARS2Q96I59 477 aaKnown RBP10.16□□□□□ -0.78
CCDC7-202ENST00000302316 FAM210AQ96ND0 272 aa10.16□□□□□ -0.78
CCDC7-202ENST00000302316 KLK9Q9UKQ9 250 aa10.16□□□□□ -0.78
CCDC7-202ENST00000302316 SONP18583 2426 aaKnown RBP10.15□□□□□ -0.78
CCDC7-202ENST00000302316 COX7A2P2O60397 106 aa10.15□□□□□ -0.78
CCDC7-202ENST00000302316 GUK1Q16774 197 aa10.15□□□□□ -0.78
CCDC7-202ENST00000302316 TMEM95Q3KNT9 176 aa10.15□□□□□ -0.78
CCDC7-202ENST00000302316 TIGITQ495A1 244 aa10.15□□□□□ -0.78
CCDC7-202ENST00000302316 FAM78BQ5VT40 261 aa10.15□□□□□ -0.78
CCDC7-202ENST00000302316 IQCF2Q8IXL9 164 aa10.15□□□□□ -0.78
CCDC7-202ENST00000302316 NECAP1Q8NC96 275 aa10.15□□□□□ -0.78
CCDC7-202ENST00000302316 VN1R17PQ8TDU5 208 aa10.15□□□□□ -0.78
CCDC7-202ENST00000302316 PBDC1Q9BVG4 233 aa10.15□□□□□ -0.78
CCDC7-202ENST00000302316 NPFFR1Q9GZQ6 430 aa10.15□□□□□ -0.78
CCDC7-202ENST00000302316 EIF5A2Q9GZV4 153 aaKnown RBP10.15□□□□□ -0.78
CCDC7-202ENST00000302316 SEPSECSQ9HD40 501 aaKnown RBP10.15□□□□□ -0.78
CCDC7-202ENST00000302316 TREM1Q9NP99 234 aa10.15□□□□□ -0.78
CCDC7-202ENST00000302316 DOK5Q9P104 306 aa10.15□□□□□ -0.78
CCDC7-202ENST00000302316 ANKRD34BA5PLL1 514 aa10.15□□□□□ -0.79
CCDC7-202ENST00000302316 SPATA31B1PQ5VZV4 182 aa10.15□□□□□ -0.79
CCDC7-202ENST00000302316 OR1L4Q8NGR5 311 aa10.15□□□□□ -0.79
CCDC7-202ENST00000302316 TMEM160Q9NX00 188 aa10.15□□□□□ -0.79
CCDC7-202ENST00000302316 TRAV30A0A087WSZ9 112 aa10.14□□□□□ -0.79
CCDC7-202ENST00000302316 F8W735 103 aaPredicted RBP10.14□□□□□ -0.79
CCDC7-202ENST00000302316 IGKV1-17P01599 117 aa10.14□□□□□ -0.79
CCDC7-202ENST00000302316 FABP1P07148 127 aa10.14□□□□□ -0.79
CCDC7-202ENST00000302316 PPIFP30405 207 aaKnown RBP10.14□□□□□ -0.79
CCDC7-202ENST00000302316 TMEM86BQ8N661 226 aa10.14□□□□□ -0.79
CCDC7-202ENST00000302316 TMEM37Q8WXS4 190 aa10.14□□□□□ -0.79
CCDC7-202ENST00000302316 PFDN5Q99471 154 aa10.14□□□□□ -0.79
CCDC7-202ENST00000302316 C19orf24Q9BVV8 132 aa10.14□□□□□ -0.79
CCDC7-202ENST00000302316 PRSS22Q9GZN4 317 aa10.14□□□□□ -0.79
CCDC7-202ENST00000302316 GNG13Q9P2W3 67 aa10.14□□□□□ -0.79
CCDC7-202ENST00000302316 FUT9Q9Y231 359 aa10.14□□□□□ -0.79
CCDC7-202ENST00000302316 PSMB11A5LHX3 300 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 OR2T8A6NH00 312 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 SCGB2A1O75556 95 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 TRGV3P03979 118 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 OR5G3P0C626 314 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 PSG1P11464 419 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 ORM2P19652 201 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 SCGB2A2Q13296 93 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 HAGHQ16775 308 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 ZNF502Q8TBZ5 544 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 GATAD1Q8WUU5 269 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 ZNF580Q9UK33 172 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 RBFOX3A6NFN3 312 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 FAM223BA6NKX1 122 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 H3BUA1 57 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 LY6G6DO95868 133 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 STAG3L2P0CL84 134 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 STAG3L3P0CL85 134 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 FCGR2BP31994 310 aaPredicted RBP10.13□□□□□ -0.79
CCDC7-202ENST00000302316 TPPP2P59282 170 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 MIR17HGQ75NE6 70 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 FAM223AQ8IWN6 122 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 OR1B1Q8NGR6 318 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 EEF1AKMT3Q96AZ1 226 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 RNF2Q99496 336 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 TXN2Q99757 166 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 TMPRSS5Q9H3S3 457 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 DNAJC4Q9NNZ3 241 aa10.13□□□□□ -0.79
CCDC7-202ENST00000302316 DNAJC9-AS1A6NH13 148 aa10.12□□□□□ -0.79
CCDC7-202ENST00000302316 CD5P06127 495 aa10.12□□□□□ -0.79
CCDC7-202ENST00000302316 RD3LP0DJH9 198 aa10.12□□□□□ -0.79
CCDC7-202ENST00000302316 ARL14EPLP0DKL9 152 aa10.12□□□□□ -0.79
CCDC7-202ENST00000302316 LYZP61626 148 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms