RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 PMS2P11Q13670 270 aa11.63□□□□□ -0.55
SMG8-201ENST00000300917 LY6G5BQ8NDX9 201 aa11.63□□□□□ -0.55
SMG8-201ENST00000300917 TNFRSF14Q92956 283 aa11.63□□□□□ -0.55
SMG8-201ENST00000300917 DNAJC4Q9NNZ3 241 aa11.63□□□□□ -0.55
SMG8-201ENST00000300917 SLC17A3O00476 420 aa11.63□□□□□ -0.55
SMG8-201ENST00000300917 PATE2Q6UY27 113 aa11.63□□□□□ -0.55
SMG8-201ENST00000300917 CLN5O75503 358 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 RBP4P02753 201 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 RELQ04864 619 aaPredicted RBP11.62□□□□□ -0.55
SMG8-201ENST00000300917 C10orf113Q5VZT2 155 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 DTX2Q86UW9 622 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 C1QL4Q86Z23 238 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 DMRT1Q9Y5R6 373 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 CXorf65A6NEN9 183 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 HIST1H2BKO60814 126 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 HIST1H2BJP06899 126 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 TRGC1P0CF51 173 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 HIST1H2BOP23527 126 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 HIST1H2BBP33778 126 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 HIST1H2BDP58876 126 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 HIST1H2BCP62807 126 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 HIST2H2BEQ16778 126 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.62□□□□□ -0.55
SMG8-201ENST00000300917 CACNG8Q8WXS5 425 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 HIST1H2BHQ93079 126 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 HIST1H2BNQ99877 126 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 HIST1H2BMQ99879 126 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 WNT10AQ9GZT5 417 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 CSPG4Q6UVK1 2322 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 SH2D7A6NKC9 451 aaPredicted RBP11.62□□□□□ -0.55
SMG8-201ENST00000300917 GGTLC3B5MD39 225 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 SPINK4O60575 86 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 C8orf88P0DMB2 117 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 S100PP25815 95 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 LINC00305Q7Z4B0 112 aa11.62□□□□□ -0.55
SMG8-201ENST00000300917 TEX22C9J3V5 150 aa11.61□□□□□ -0.55
SMG8-201ENST00000300917 LY6LH3BQJ8 138 aa11.61□□□□□ -0.55
SMG8-201ENST00000300917 AP4M1O00189 453 aa11.61□□□□□ -0.55
SMG8-201ENST00000300917 IGHV3-23P01764 117 aa11.61□□□□□ -0.55
SMG8-201ENST00000300917 GPX4P36969 197 aaPredicted RBP11.61□□□□□ -0.55
SMG8-201ENST00000300917 C8orf46Q8TAG6 207 aa11.61□□□□□ -0.55
SMG8-201ENST00000300917 RNASEH2CQ8TDP1 164 aaKnown RBP11.61□□□□□ -0.55
SMG8-201ENST00000300917 EAF1Q96JC9 268 aaPredicted RBP11.61□□□□□ -0.55
SMG8-201ENST00000300917 TRAV34A0A0B4J273 112 aa11.61□□□□□ -0.55
SMG8-201ENST00000300917 TCRBV4S1A1TA0A5B7 111 aa11.61□□□□□ -0.55
SMG8-201ENST00000300917 CRYGBP07316 175 aa11.61□□□□□ -0.55
SMG8-201ENST00000300917 RANP62826 216 aaKnown RBP11.61□□□□□ -0.55
SMG8-201ENST00000300917 SLC25A2Q9BXI2 301 aa11.61□□□□□ -0.55
SMG8-201ENST00000300917 MDFIC2A0A1B0GVS7 189 aa11.61□□□□□ -0.55
SMG8-201ENST00000300917 PFN1P07737 140 aaKnown RBP11.61□□□□□ -0.55
SMG8-201ENST00000300917 PRTN3P24158 256 aa11.61□□□□□ -0.55
SMG8-201ENST00000300917 LYZP61626 148 aa11.61□□□□□ -0.55
SMG8-201ENST00000300917 FXYD3Q14802 87 aa11.61□□□□□ -0.55
SMG8-201ENST00000300917 PQLC2Q6ZP29 291 aa11.61□□□□□ -0.55
SMG8-201ENST00000300917 NRGNQ92686 78 aa11.61□□□□□ -0.55
SMG8-201ENST00000300917 MGST1P10620 155 aaKnown RBP11.6□□□□□ -0.55
SMG8-201ENST00000300917 TAS2R45P59539 299 aa11.6□□□□□ -0.55
SMG8-201ENST00000300917 ABCA12Q86UK0 2595 aa11.6□□□□□ -0.55
SMG8-201ENST00000300917 K7EN84 100 aa11.6□□□□□ -0.55
SMG8-201ENST00000300917 MALSU1Q96EH3 234 aa11.6□□□□□ -0.55
SMG8-201ENST00000300917 CTDSP1Q9GZU7 261 aa11.6□□□□□ -0.55
SMG8-201ENST00000300917 PPP5D1E7EU14 171 aa11.59□□□□□ -0.55
SMG8-201ENST00000300917 NBR2O15453 112 aa11.59□□□□□ -0.55
SMG8-201ENST00000300917 GNG5P63218 68 aa11.59□□□□□ -0.55
SMG8-201ENST00000300917 SLC35B1P78383 322 aa11.59□□□□□ -0.55
SMG8-201ENST00000300917 SGMS2Q8NHU3 365 aa11.59□□□□□ -0.55
SMG8-201ENST00000300917 PAXXQ9BUH6 204 aa11.59□□□□□ -0.55
SMG8-201ENST00000300917 ZNF320A2RRD8 509 aa11.59□□□□□ -0.55
SMG8-201ENST00000300917 A6NNC1 897 aa11.59□□□□□ -0.55
SMG8-201ENST00000300917 FNDC10F2Z333 226 aa11.59□□□□□ -0.55
SMG8-201ENST00000300917 CENPWQ5EE01 88 aa11.59□□□□□ -0.55
SMG8-201ENST00000300917 C22orf15Q8WYQ4 148 aa11.59□□□□□ -0.55
SMG8-201ENST00000300917 SFRP2Q96HF1 295 aa11.59□□□□□ -0.55
SMG8-201ENST00000300917 FAM167A-AS1Q96KT0 104 aa11.59□□□□□ -0.55
SMG8-201ENST00000300917 IGHV3OR16-8A0A075B7F1 116 aa11.59□□□□□ -0.55
SMG8-201ENST00000300917 IGHV3-35A0A0C4DH35 117 aa11.59□□□□□ -0.55
SMG8-201ENST00000300917 HELTA6NFD8 242 aa11.59□□□□□ -0.55
SMG8-201ENST00000300917 MAS1LP35410 378 aa11.59□□□□□ -0.55
SMG8-201ENST00000300917 CEACAM3P40198 252 aa11.59□□□□□ -0.55
SMG8-201ENST00000300917 EFNA4P52798 201 aa11.59□□□□□ -0.55
SMG8-201ENST00000300917 TIGITQ495A1 244 aa11.59□□□□□ -0.55
SMG8-201ENST00000300917 FAM120AOSQ5T036 256 aa11.59□□□□□ -0.55
SMG8-201ENST00000300917 OR2T10Q8NGZ9 312 aa11.59□□□□□ -0.55
SMG8-201ENST00000300917 CFHR4Q92496 578 aa11.59□□□□□ -0.55
SMG8-201ENST00000300917 TMEM167BQ9NRX6 74 aa11.59□□□□□ -0.55
SMG8-201ENST00000300917 F11RQ9Y624 299 aaKnown RBP11.59□□□□□ -0.55
SMG8-201ENST00000300917 IGHV2-5P01817 119 aa11.58□□□□□ -0.56
SMG8-201ENST00000300917 FABP1P07148 127 aa11.58□□□□□ -0.56
SMG8-201ENST00000300917 OR11H6Q8NGC7 330 aa11.58□□□□□ -0.56
SMG8-201ENST00000300917 GPR61Q9BZJ8 451 aa11.58□□□□□ -0.56
SMG8-201ENST00000300917 RNASE7Q9H1E1 156 aaKnown RBP11.58□□□□□ -0.56
SMG8-201ENST00000300917 TMEM242Q9NWH2 141 aa11.58□□□□□ -0.56
SMG8-201ENST00000300917 PTPN13Q12923 2485 aa11.58□□□□□ -0.56
SMG8-201ENST00000300917 HOXB4P17483 251 aaPredicted RBP11.58□□□□□ -0.56
SMG8-201ENST00000300917 TCL1AP56279 114 aa11.58□□□□□ -0.56
SMG8-201ENST00000300917 PSMB11A5LHX3 300 aa11.57□□□□□ -0.56
SMG8-201ENST00000300917 UBE2CO00762 179 aa11.57□□□□□ -0.56
SMG8-201ENST00000300917 GNG4P50150 75 aa11.57□□□□□ -0.56
SMG8-201ENST00000300917 ATP5IP56385 69 aaPredicted RBP11.57□□□□□ -0.56
SMG8-201ENST00000300917 ERVFC1-1P60608 527 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms