RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 LOC105371242A0A075B767 164 aa13.68□□□□□ -0.22
SNAPC4-201ENST00000298532 IGHV2OR16-5A0A0B4J2B6 119 aa13.68□□□□□ -0.22
SNAPC4-201ENST00000298532 ERVK11-1P61568 191 aa13.68□□□□□ -0.22
SNAPC4-201ENST00000298532 MOB4Q9Y3A3 225 aa13.68□□□□□ -0.22
SNAPC4-201ENST00000298532 SDK2Q58EX2 2172 aa13.68□□□□□ -0.22
SNAPC4-201ENST00000298532 IGHV2-70P01814 119 aa13.68□□□□□ -0.22
SNAPC4-201ENST00000298532 SLC25A2Q9BXI2 301 aa13.68□□□□□ -0.22
SNAPC4-201ENST00000298532 CRIM1Q9NZV1 1036 aa13.68□□□□□ -0.22
SNAPC4-201ENST00000298532 TGFAP01135 160 aa13.68□□□□□ -0.22
SNAPC4-201ENST00000298532 ANAPC13Q9BS18 74 aa13.68□□□□□ -0.22
SNAPC4-201ENST00000298532 DPM3Q9P2X0 92 aa13.68□□□□□ -0.22
SNAPC4-201ENST00000298532 PSG8Q9UQ74 426 aa13.68□□□□□ -0.22
SNAPC4-201ENST00000298532 GREB1Q4ZG55 1949 aa13.67□□□□□ -0.22
SNAPC4-201ENST00000298532 IGKV1-5P01602 117 aa13.67□□□□□ -0.22
SNAPC4-201ENST00000298532 SUMO2P61956 95 aaKnown RBP13.67□□□□□ -0.22
SNAPC4-201ENST00000298532 ASCL2Q99929 193 aa13.67□□□□□ -0.22
SNAPC4-201ENST00000298532 HOXA3O43365 443 aaPredicted RBP13.67□□□□□ -0.22
SNAPC4-201ENST00000298532 MRPL27Q9P0M9 148 aaKnown RBP13.67□□□□□ -0.22
SNAPC4-201ENST00000298532 IGKV1-27A0A075B6S5 117 aa13.67□□□□□ -0.22
SNAPC4-201ENST00000298532 CEACAM4O75871 244 aa13.67□□□□□ -0.22
SNAPC4-201ENST00000298532 SPSB3Q6PJ21 355 aa13.67□□□□□ -0.22
SNAPC4-201ENST00000298532 CFPP27918 469 aa13.67□□□□□ -0.22
SNAPC4-201ENST00000298532 PDLIM4P50479 330 aa13.67□□□□□ -0.22
SNAPC4-201ENST00000298532 GAGE13Q4V321 117 aa13.67□□□□□ -0.22
SNAPC4-201ENST00000298532 FBXL7Q9UJT9 491 aa13.67□□□□□ -0.22
SNAPC4-201ENST00000298532 IGKCP01834 107 aa13.66□□□□□ -0.22
SNAPC4-201ENST00000298532 MPV17L2Q567V2 206 aa13.66□□□□□ -0.22
SNAPC4-201ENST00000298532 PVRIGQ6DKI7 326 aa13.66□□□□□ -0.22
SNAPC4-201ENST00000298532 S4R3C0 116 aa13.66□□□□□ -0.22
SNAPC4-201ENST00000298532 A0A0G2JLM5 398 aa13.66□□□□□ -0.22
SNAPC4-201ENST00000298532 VKORC1Q9BQB6 163 aa13.66□□□□□ -0.22
SNAPC4-201ENST00000298532 B9A039 149 aa13.66□□□□□ -0.22
SNAPC4-201ENST00000298532 CELA3BP08861 270 aa13.66□□□□□ -0.22
SNAPC4-201ENST00000298532 NBL1P41271 181 aa13.66□□□□□ -0.22
SNAPC4-201ENST00000298532 LCN12Q6JVE5 192 aa13.66□□□□□ -0.22
SNAPC4-201ENST00000298532 SLC25A48Q6ZT89 311 aaKnown RBP13.66□□□□□ -0.22
SNAPC4-201ENST00000298532 RAX2Q96IS3 184 aa13.66□□□□□ -0.22
SNAPC4-201ENST00000298532 C20orf144Q9BQM9 153 aa13.66□□□□□ -0.22
SNAPC4-201ENST00000298532 IGHV1-2P23083 117 aa13.66□□□□□ -0.22
SNAPC4-201ENST00000298532 SRSF1Q07955 248 aaKnown RBP eCLIP13.66□□□□□ -0.22
SNAPC4-201ENST00000298532 LINC01559Q495D7 138 aa13.66□□□□□ -0.22
SNAPC4-201ENST00000298532 SMPXQ9UHP9 88 aa13.66□□□□□ -0.22
SNAPC4-201ENST00000298532 RNASE1P07998 156 aaKnown RBP13.65□□□□□ -0.22
SNAPC4-201ENST00000298532 NABP1Q96AH0 204 aa13.65□□□□□ -0.22
SNAPC4-201ENST00000298532 RALGAPA1Q6GYQ0 2036 aa13.65□□□□□ -0.22
SNAPC4-201ENST00000298532 SNRPD3P62318 126 aaKnown RBP13.65□□□□□ -0.22
SNAPC4-201ENST00000298532 NPFFO15130 113 aa13.65□□□□□ -0.22
SNAPC4-201ENST00000298532 SPATA31B1PQ5VZV4 182 aa13.65□□□□□ -0.22
SNAPC4-201ENST00000298532 EFNA2O43921 213 aa13.64□□□□□ -0.23
SNAPC4-201ENST00000298532 ATP5J2P56134 94 aa13.64□□□□□ -0.23
SNAPC4-201ENST00000298532 RRN3P1Q2M238 152 aa13.64□□□□□ -0.23
SNAPC4-201ENST00000298532 C10orf91Q5T1B1 145 aa13.64□□□□□ -0.23
SNAPC4-201ENST00000298532 SFTA2Q6UW10 78 aa13.64□□□□□ -0.23
SNAPC4-201ENST00000298532 TMEM190Q8WZ59 177 aa13.64□□□□□ -0.23
SNAPC4-201ENST00000298532 CD33P20138 364 aa13.64□□□□□ -0.23
SNAPC4-201ENST00000298532 A8MWV9 139 aa13.64□□□□□ -0.23
SNAPC4-201ENST00000298532 E9PQ18 207 aa13.64□□□□□ -0.23
SNAPC4-201ENST00000298532 IGHV3-23P01764 117 aa13.64□□□□□ -0.23
SNAPC4-201ENST00000298532 RTN4RL2Q86UN3 420 aa13.64□□□□□ -0.23
SNAPC4-201ENST00000298532 ZIC4Q8N9L1 334 aa13.64□□□□□ -0.23
SNAPC4-201ENST00000298532 RNF125Q96EQ8 232 aa13.64□□□□□ -0.23
SNAPC4-201ENST00000298532 MPDZO75970 2070 aa13.64□□□□□ -0.23
SNAPC4-201ENST00000298532 TPTE2P1Q5T6R2 138 aa13.64□□□□□ -0.23
SNAPC4-201ENST00000298532 SEPSECSQ9HD40 501 aaKnown RBP13.64□□□□□ -0.23
SNAPC4-201ENST00000298532 IGHV3-49A0A0A0MS15 119 aa13.63□□□□□ -0.23
SNAPC4-201ENST00000298532 MGST2Q99735 147 aa13.63□□□□□ -0.23
SNAPC4-201ENST00000298532 LHX2P50458 406 aa13.63□□□□□ -0.23
SNAPC4-201ENST00000298532 FGFBP3Q8TAT2 258 aa13.63□□□□□ -0.23
SNAPC4-201ENST00000298532 POLR3KQ9Y2Y1 108 aaPredicted RBP13.63□□□□□ -0.23
SNAPC4-201ENST00000298532 ABCA7Q8IZY2 2146 aa13.63□□□□□ -0.23
SNAPC4-201ENST00000298532 IGHV2-5P01817 119 aa13.63□□□□□ -0.23
SNAPC4-201ENST00000298532 FOXF2Q12947 444 aa13.63□□□□□ -0.23
SNAPC4-201ENST00000298532 ORMDL2Q53FV1 153 aa13.63□□□□□ -0.23
SNAPC4-201ENST00000298532 RNF144BQ7Z419 303 aa13.63□□□□□ -0.23
SNAPC4-201ENST00000298532 TNFRSF18Q9Y5U5 241 aa13.63□□□□□ -0.23
SNAPC4-201ENST00000298532 TRAV5A0A0B4J249 113 aa13.63□□□□□ -0.23
SNAPC4-201ENST00000298532 OR13C6PQ8NH95 151 aa13.63□□□□□ -0.23
SNAPC4-201ENST00000298532 ARPC1AQ92747 370 aa13.63□□□□□ -0.23
SNAPC4-201ENST00000298532 SNHG12Q9BXW3 62 aa13.63□□□□□ -0.23
SNAPC4-201ENST00000298532 PNRC2Q9NPJ4 139 aaKnown RBP13.63□□□□□ -0.23
SNAPC4-201ENST00000298532 IGHV3-66A0A0C4DH42 116 aa13.62□□□□□ -0.23
SNAPC4-201ENST00000298532 H3BRM9 83 aa13.62□□□□□ -0.23
SNAPC4-201ENST00000298532 hDV102S1A0JD36 115 aa13.62□□□□□ -0.23
SNAPC4-201ENST00000298532 IGKV1D-33P01593 117 aa13.62□□□□□ -0.23
SNAPC4-201ENST00000298532 IGKV1-33P01594 117 aa13.62□□□□□ -0.23
SNAPC4-201ENST00000298532 RNASE6Q93091 150 aaKnown RBP13.62□□□□□ -0.23
SNAPC4-201ENST00000298532 CCL19Q99731 98 aa13.62□□□□□ -0.23
SNAPC4-201ENST00000298532 CYSLTR1Q9Y271 337 aa13.62□□□□□ -0.23
SNAPC4-201ENST00000298532 E9PLN8 166 aa13.62□□□□□ -0.23
SNAPC4-201ENST00000298532 GUSBP1Q15486 140 aa13.62□□□□□ -0.23
SNAPC4-201ENST00000298532 Q6ZS49 121 aa13.62□□□□□ -0.23
SNAPC4-201ENST00000298532 SLC50A1Q9BRV3 221 aa13.62□□□□□ -0.23
SNAPC4-201ENST00000298532 SYS1-DBNDD2H3BUS1 97 aa13.62□□□□□ -0.23
SNAPC4-201ENST00000298532 PFN1P07737 140 aaKnown RBP13.62□□□□□ -0.23
SNAPC4-201ENST00000298532 COX11Q9Y6N1 276 aa13.62□□□□□ -0.23
SNAPC4-201ENST00000298532 TRBV6-6A0A0A6YYG2 114 aa13.61□□□□□ -0.23
SNAPC4-201ENST00000298532 BCL6BQ8N143 479 aaPredicted RBP13.61□□□□□ -0.23
SNAPC4-201ENST00000298532 NAA38Q9BRA0 125 aaKnown RBP13.61□□□□□ -0.23
SNAPC4-201ENST00000298532 CD5LO43866 347 aa13.61□□□□□ -0.23
SNAPC4-201ENST00000298532 C8orf46Q8TAG6 207 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms