RNA–Protein interactions for RNA: ENST00000298260.8

SKA3-201, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 2,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-201ENST00000298260 BLNKQ8WV28 456 aa10.97□□□□□ -0.65
SKA3-201ENST00000298260 GTSF1Q8WW33 167 aa10.97□□□□□ -0.65
SKA3-201ENST00000298260 PERPQ96FX8 193 aa10.97□□□□□ -0.65
SKA3-201ENST00000298260 ZNRD1Q9P1U0 126 aa10.97□□□□□ -0.65
SKA3-201ENST00000298260 K7EMI3 77 aa10.97□□□□□ -0.65
SKA3-201ENST00000298260 ACP7Q6ZNF0 438 aa10.97□□□□□ -0.65
SKA3-201ENST00000298260 BPIFA4PQ86YQ2 179 aa10.97□□□□□ -0.65
SKA3-201ENST00000298260 LRRC29Q8WV35 223 aa10.97□□□□□ -0.65
SKA3-201ENST00000298260 GRAMD2BQ96HH9 432 aa10.97□□□□□ -0.65
SKA3-201ENST00000298260 S1PR3Q99500 378 aa10.97□□□□□ -0.65
SKA3-201ENST00000298260 SLC25A33Q9BSK2 321 aa10.97□□□□□ -0.65
SKA3-201ENST00000298260 THYN1Q9P016 225 aa10.97□□□□□ -0.65
SKA3-201ENST00000298260 OR2J3O76001 311 aa10.96□□□□□ -0.65
SKA3-201ENST00000298260 AP1S3Q96PC3 154 aa10.96□□□□□ -0.65
SKA3-201ENST00000298260 SLC25A2Q9BXI2 301 aa10.96□□□□□ -0.65
SKA3-201ENST00000298260 AGFG2O95081 481 aa10.96□□□□□ -0.66
SKA3-201ENST00000298260 FAM106CPP0CH98 169 aa10.96□□□□□ -0.66
SKA3-201ENST00000298260 PPIAL4GP0DN37 164 aa10.96□□□□□ -0.66
SKA3-201ENST00000298260 HIST1H1EP10412 219 aaKnown RBP10.96□□□□□ -0.66
SKA3-201ENST00000298260 FAM106AQ4KMX7 169 aa10.96□□□□□ -0.66
SKA3-201ENST00000298260 C11orf53Q8IXP5 236 aa10.96□□□□□ -0.66
SKA3-201ENST00000298260 Q8IYB0 196 aa10.96□□□□□ -0.66
SKA3-201ENST00000298260 ENY2Q9NPA8 101 aa10.96□□□□□ -0.66
SKA3-201ENST00000298260 RABAC1Q9UI14 185 aa10.96□□□□□ -0.66
SKA3-201ENST00000298260 C15orf65H3BRN8 121 aa10.95□□□□□ -0.66
SKA3-201ENST00000298260 MAGEA5P43359 124 aa10.95□□□□□ -0.66
SKA3-201ENST00000298260 SAMD13Q5VXD3 122 aa10.95□□□□□ -0.66
SKA3-201ENST00000298260 WFDC12Q8WWY7 111 aa10.95□□□□□ -0.66
SKA3-201ENST00000298260 FAM167A-AS1Q96KT0 104 aa10.95□□□□□ -0.66
SKA3-201ENST00000298260 MAP1LC3CQ9BXW4 147 aa10.95□□□□□ -0.66
SKA3-201ENST00000298260 SLC25A10Q9UBX3 287 aaPredicted RBP10.95□□□□□ -0.66
SKA3-201ENST00000298260 CSMD1Q96PZ7 3565 aa10.95□□□□□ -0.66
SKA3-201ENST00000298260 IGHV3OR15-7A0A075B7D8 119 aa10.95□□□□□ -0.66
SKA3-201ENST00000298260 LY6G6EA0A0G2JKS1 128 aa10.95□□□□□ -0.66
SKA3-201ENST00000298260 C8orf88P0DMB2 117 aa10.95□□□□□ -0.66
SKA3-201ENST00000298260 KIR3DS1Q14943 382 aa10.95□□□□□ -0.66
SKA3-201ENST00000298260 GUSBP1Q15486 140 aa10.95□□□□□ -0.66
SKA3-201ENST00000298260 PILRBQ9UKJ0 227 aa10.95□□□□□ -0.66
SKA3-201ENST00000298260 U3KQA8 63 aa10.95□□□□□ -0.66
SKA3-201ENST00000298260 CACNA1GO43497 2377 aa10.95□□□□□ -0.66
SKA3-201ENST00000298260 MED13Q9UHV7 2174 aa10.95□□□□□ -0.66
SKA3-201ENST00000298260 A0A1B0GXF2 115 aa10.94□□□□□ -0.66
SKA3-201ENST00000298260 C15orf61A6NNL5 157 aa10.94□□□□□ -0.66
SKA3-201ENST00000298260 PEX7O00628 323 aa10.94□□□□□ -0.66
SKA3-201ENST00000298260 HBBP68871 147 aa10.94□□□□□ -0.66
SKA3-201ENST00000298260 PMS2CLQ68D20 193 aa10.94□□□□□ -0.66
SKA3-201ENST00000298260 CD177Q8N6Q3 437 aa10.94□□□□□ -0.66
SKA3-201ENST00000298260 H1FXQ92522 213 aaKnown RBP10.94□□□□□ -0.66
SKA3-201ENST00000298260 A0A0G2JLM5 398 aa10.94□□□□□ -0.66
SKA3-201ENST00000298260 SPINT2O43291 252 aa10.94□□□□□ -0.66
SKA3-201ENST00000298260 OR10AG1Q8NH19 301 aa10.94□□□□□ -0.66
SKA3-201ENST00000298260 F11RQ9Y624 299 aaKnown RBP10.94□□□□□ -0.66
SKA3-201ENST00000298260 MGAQ8IWI9 3026 aa10.94□□□□□ -0.66
SKA3-201ENST00000298260 M0R296 226 aa10.94□□□□□ -0.66
SKA3-201ENST00000298260 SMPD2O60906 423 aa10.94□□□□□ -0.66
SKA3-201ENST00000298260 AZU1P20160 251 aa10.94□□□□□ -0.66
SKA3-201ENST00000298260 RBPJQ06330 500 aa10.94□□□□□ -0.66
SKA3-201ENST00000298260 ZNF329Q86UD4 541 aa10.94□□□□□ -0.66
SKA3-201ENST00000298260 WDR31Q8NA23 367 aa10.94□□□□□ -0.66
SKA3-201ENST00000298260 ZNRF1Q8ND25 227 aa10.94□□□□□ -0.66
SKA3-201ENST00000298260 OR2K2Q8NGT1 345 aa10.94□□□□□ -0.66
SKA3-201ENST00000298260 ABI3Q9P2A4 366 aa10.94□□□□□ -0.66
SKA3-201ENST00000298260 OR51B2Q9Y5P1 312 aa10.94□□□□□ -0.66
SKA3-201ENST00000298260 TEX48A0A1B0GUV7 120 aa10.93□□□□□ -0.66
SKA3-201ENST00000298260 HLA-DRB1P01911 266 aa10.93□□□□□ -0.66
SKA3-201ENST00000298260 COX8AP10176 69 aa10.93□□□□□ -0.66
SKA3-201ENST00000298260 PLP1P60201 277 aa10.93□□□□□ -0.66
SKA3-201ENST00000298260 HSPE1P61604 102 aaKnown RBP10.93□□□□□ -0.66
SKA3-201ENST00000298260 NRN1LQ496H8 165 aa10.93□□□□□ -0.66
SKA3-201ENST00000298260 OR8A1Q8NGG7 326 aa10.93□□□□□ -0.66
SKA3-201ENST00000298260 IFI27L2Q9H2X8 130 aa10.93□□□□□ -0.66
SKA3-201ENST00000298260 IGKV3D-15A0A087WSY6 115 aa10.93□□□□□ -0.66
SKA3-201ENST00000298260 C9orf118A6NHY6 69 aa10.93□□□□□ -0.66
SKA3-201ENST00000298260 J3QR06 171 aa10.93□□□□□ -0.66
SKA3-201ENST00000298260 ACP1P24666 158 aa10.93□□□□□ -0.66
SKA3-201ENST00000298260 LOXL1Q08397 574 aaPredicted RBP10.93□□□□□ -0.66
SKA3-201ENST00000298260 GTF2H5Q6ZYL4 71 aa10.93□□□□□ -0.66
SKA3-201ENST00000298260 LINC00470Q9BZP3 86 aa10.93□□□□□ -0.66
SKA3-201ENST00000298260 ROS1P08922 2347 aa10.92□□□□□ -0.66
SKA3-201ENST00000298260 TRAV8-1A0A0A6YYK1 113 aa10.92□□□□□ -0.66
SKA3-201ENST00000298260 K7EP34 96 aa10.92□□□□□ -0.66
SKA3-201ENST00000298260 IGKV1-16P04430 117 aa10.92□□□□□ -0.66
SKA3-201ENST00000298260 WDR82Q6UXN9 313 aa10.92□□□□□ -0.66
SKA3-201ENST00000298260 C7orf69Q9H7B7 122 aa10.92□□□□□ -0.66
SKA3-201ENST00000298260 CEP295Q9C0D2 2601 aa10.92□□□□□ -0.66
SKA3-201ENST00000298260 PPIAL4CA0A0B4J2A2 164 aa10.92□□□□□ -0.66
SKA3-201ENST00000298260 FNDC10F2Z333 226 aa10.92□□□□□ -0.66
SKA3-201ENST00000298260 MOSP00540 346 aa10.92□□□□□ -0.66
SKA3-201ENST00000298260 TAS2R45P59539 299 aa10.92□□□□□ -0.66
SKA3-201ENST00000298260 TMEM177Q53S58 311 aa10.92□□□□□ -0.66
SKA3-201ENST00000298260 PIP4P2Q8N4L2 257 aa10.92□□□□□ -0.66
SKA3-201ENST00000298260 ARRDC1-AS1Q9H2J1 176 aa10.92□□□□□ -0.66
SKA3-201ENST00000298260 SPCS1Q9Y6A9 102 aa10.92□□□□□ -0.66
SKA3-201ENST00000298260 DMXL2Q8TDJ6 3036 aa10.92□□□□□ -0.66
SKA3-201ENST00000298260 SRRM4A7MD48 611 aaKnown RBP10.91□□□□□ -0.66
SKA3-201ENST00000298260 LYZL6O75951 148 aa10.91□□□□□ -0.66
SKA3-201ENST00000298260 CYB561P49447 251 aa10.91□□□□□ -0.66
SKA3-201ENST00000298260 RTL8BQ17RB0 113 aa10.91□□□□□ -0.66
SKA3-201ENST00000298260 NEGR1Q7Z3B1 354 aa10.91□□□□□ -0.66
SKA3-201ENST00000298260 WFDC3Q8IUB2 231 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms