RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 TIMM23O14925 209 aa9.4□□□□□ -0.9
RHO-201ENST00000296271 IGLV2-8P01709 118 aa9.4□□□□□ -0.9
RHO-201ENST00000296271 MC5RP33032 325 aa9.4□□□□□ -0.9
RHO-201ENST00000296271 RPL27AP46776 148 aaKnown RBP9.4□□□□□ -0.9
RHO-201ENST00000296271 ERVFC1-1P60608 527 aa9.4□□□□□ -0.9
RHO-201ENST00000296271 KLF17Q5JT82 389 aaPredicted RBP9.4□□□□□ -0.9
RHO-201ENST00000296271 Q71RC1 249 aaPredicted RBP9.4□□□□□ -0.9
RHO-201ENST00000296271 LINC00469Q8N7U9 141 aa9.4□□□□□ -0.9
RHO-201ENST00000296271 OR1B1Q8NGR6 318 aa9.4□□□□□ -0.9
RHO-201ENST00000296271 BLNKQ8WV28 456 aa9.4□□□□□ -0.9
RHO-201ENST00000296271 CACNG8Q8WXS5 425 aa9.4□□□□□ -0.9
RHO-201ENST00000296271 C11orf52Q96A22 123 aa9.4□□□□□ -0.9
RHO-201ENST00000296271 RPEQ96AT9 228 aa9.4□□□□□ -0.9
RHO-201ENST00000296271 OR51M1Q9H341 326 aa9.4□□□□□ -0.9
RHO-201ENST00000296271 GPX4P36969 197 aaPredicted RBP9.4□□□□□ -0.9
RHO-201ENST00000296271 FBXL19-AS1Q494R0 122 aa9.4□□□□□ -0.9
RHO-201ENST00000296271 C10orf113Q5VZT2 155 aa9.4□□□□□ -0.9
RHO-201ENST00000296271 KCNIP4Q6PIL6 250 aa9.4□□□□□ -0.9
RHO-201ENST00000296271 LINC00305Q7Z4B0 112 aa9.4□□□□□ -0.9
RHO-201ENST00000296271 FAM168AQ92567 244 aa9.4□□□□□ -0.9
RHO-201ENST00000296271 PITPNC1Q9UKF7 332 aa9.4□□□□□ -0.9
RHO-201ENST00000296271 TRAPPC1Q9Y5R8 145 aa9.4□□□□□ -0.9
RHO-201ENST00000296271 TRAV20A0A0B4J274 112 aa9.39□□□□□ -0.91
RHO-201ENST00000296271 TCRBV4S1A1TA0A5B7 111 aa9.39□□□□□ -0.91
RHO-201ENST00000296271 TEX22C9J3V5 150 aa9.39□□□□□ -0.91
RHO-201ENST00000296271 MT-CO2P00403 227 aa9.39□□□□□ -0.91
RHO-201ENST00000296271 MGST1P10620 155 aaKnown RBP9.39□□□□□ -0.91
RHO-201ENST00000296271 CD33P20138 364 aa9.39□□□□□ -0.91
RHO-201ENST00000296271 ADMP35318 185 aa9.39□□□□□ -0.91
RHO-201ENST00000296271 UQCRFS1P47985 274 aa9.39□□□□□ -0.91
RHO-201ENST00000296271 GNG4P50150 75 aa9.39□□□□□ -0.91
RHO-201ENST00000296271 RANP62826 216 aaKnown RBP9.39□□□□□ -0.91
RHO-201ENST00000296271 FAM71F2Q6NXP2 309 aa9.39□□□□□ -0.91
RHO-201ENST00000296271 PPP1R27Q86WC6 154 aa9.39□□□□□ -0.91
RHO-201ENST00000296271 TMEM183AQ8IXX5 376 aa9.39□□□□□ -0.91
RHO-201ENST00000296271 TNFRSF19Q9NS68 423 aa9.39□□□□□ -0.91
RHO-201ENST00000296271 RPH3ALQ9UNE2 315 aa9.39□□□□□ -0.91
RHO-201ENST00000296271 F2Z2F3 143 aa9.39□□□□□ -0.91
RHO-201ENST00000296271 LGALS7P47929 136 aa9.39□□□□□ -0.91
RHO-201ENST00000296271 COMPP49747 757 aaPredicted RBP9.39□□□□□ -0.91
RHO-201ENST00000296271 PRRX1P54821 245 aa9.39□□□□□ -0.91
RHO-201ENST00000296271 SSX8Q7RTT4 187 aa9.39□□□□□ -0.91
RHO-201ENST00000296271 OR8I2Q8N0Y5 310 aa9.39□□□□□ -0.91
RHO-201ENST00000296271 DYNAPQ8N1N2 210 aa9.39□□□□□ -0.91
RHO-201ENST00000296271 OR4A5Q8NH83 315 aa9.39□□□□□ -0.91
RHO-201ENST00000296271 SSBP3Q9BWW4 388 aaPredicted RBP9.39□□□□□ -0.91
RHO-201ENST00000296271 PRO1933Q9H354 126 aa9.39□□□□□ -0.91
RHO-201ENST00000296271 TMEM167BQ9NRX6 74 aa9.39□□□□□ -0.91
RHO-201ENST00000296271 V9GYV3 84 aa9.39□□□□□ -0.91
RHO-201ENST00000296271 ELOA3CA0A087WX78 387 aaPredicted RBP9.38□□□□□ -0.91
RHO-201ENST00000296271 TYMSP04818 313 aa9.38□□□□□ -0.91
RHO-201ENST00000296271 PLGLAQ15195 96 aa9.38□□□□□ -0.91
RHO-201ENST00000296271 UNQ6494/PRO21346Q6UXR6 183 aa9.38□□□□□ -0.91
RHO-201ENST00000296271 OR8B3Q8NGG8 313 aa9.38□□□□□ -0.91
RHO-201ENST00000296271 RNASEH2CQ8TDP1 164 aaKnown RBP9.38□□□□□ -0.91
RHO-201ENST00000296271 OR8B2Q96RD0 313 aa9.38□□□□□ -0.91
RHO-201ENST00000296271 PAXXQ9BUH6 204 aa9.38□□□□□ -0.91
RHO-201ENST00000296271 PRDM13Q9H4Q3 707 aa9.38□□□□□ -0.91
RHO-201ENST00000296271 INS-IGF2F8WCM5 200 aa9.38□□□□□ -0.91
RHO-201ENST00000296271 LY6LH3BQJ8 138 aa9.38□□□□□ -0.91
RHO-201ENST00000296271 TOX4O94842 621 aa9.38□□□□□ -0.91
RHO-201ENST00000296271 CD99P14209 185 aa9.38□□□□□ -0.91
RHO-201ENST00000296271 FOXL1Q12952 345 aa9.38□□□□□ -0.91
RHO-201ENST00000296271 MMD2Q8IY49 270 aa9.38□□□□□ -0.91
RHO-201ENST00000296271 SRSF12Q8WXF0 261 aaKnown RBP9.38□□□□□ -0.91
RHO-201ENST00000296271 FXYD5Q96DB9 178 aa9.38□□□□□ -0.91
RHO-201ENST00000296271 ASCL2Q99929 193 aa9.38□□□□□ -0.91
RHO-201ENST00000296271 TXNDC17Q9BRA2 123 aa9.38□□□□□ -0.91
RHO-201ENST00000296271 ZFP36P26651 326 aaKnown RBP9.37□□□□□ -0.91
RHO-201ENST00000296271 IER3P46695 156 aa9.37□□□□□ -0.91
RHO-201ENST00000296271 SUB1P53999 127 aaKnown RBP eCLIP9.37□□□□□ -0.91
RHO-201ENST00000296271 MMDQ15546 238 aa9.37□□□□□ -0.91
RHO-201ENST00000296271 C11orf71Q6IPW1 123 aa9.37□□□□□ -0.91
RHO-201ENST00000296271 BCL6BQ8N143 479 aaPredicted RBP9.37□□□□□ -0.91
RHO-201ENST00000296271 TEX45Q8NA69 505 aa9.37□□□□□ -0.91
RHO-201ENST00000296271 ZFYVE26Q68DK2 2539 aa9.37□□□□□ -0.91
RHO-201ENST00000296271 ISLRO14498 428 aa9.37□□□□□ -0.91
RHO-201ENST00000296271 BTF3P20290 206 aaKnown RBP9.37□□□□□ -0.91
RHO-201ENST00000296271 TAS2R45P59539 299 aa9.37□□□□□ -0.91
RHO-201ENST00000296271 SSX2Q16385 188 aa9.37□□□□□ -0.91
RHO-201ENST00000296271 THAP8Q8NA92 274 aa9.37□□□□□ -0.91
RHO-201ENST00000296271 IGF2BP2-AS1Q96M15 143 aa9.37□□□□□ -0.91
RHO-201ENST00000296271 IL36BQ9NZH7 164 aa9.37□□□□□ -0.91
RHO-201ENST00000296271 C9JCJ5 164 aa9.36□□□□□ -0.91
RHO-201ENST00000296271 TGOLN2O43493 480 aa9.36□□□□□ -0.91
RHO-201ENST00000296271 NDUFS6O75380 124 aaKnown RBP9.36□□□□□ -0.91
RHO-201ENST00000296271 LIPFP07098 398 aa9.36□□□□□ -0.91
RHO-201ENST00000296271 CRYGCP07315 174 aa9.36□□□□□ -0.91
RHO-201ENST00000296271 CNN1P51911 297 aaKnown RBP9.36□□□□□ -0.91
RHO-201ENST00000296271 KIAA1644Q3SXP7 199 aa9.36□□□□□ -0.91
RHO-201ENST00000296271 ZNF329Q86UD4 541 aa9.36□□□□□ -0.91
RHO-201ENST00000296271 LY6G5BQ8NDX9 201 aa9.36□□□□□ -0.91
RHO-201ENST00000296271 SERTAD4Q9NUC0 356 aa9.36□□□□□ -0.91
RHO-201ENST00000296271 TP53TG3Q9ULZ0 132 aa9.36□□□□□ -0.91
RHO-201ENST00000296271 C19orf84I3L1E1 186 aa9.36□□□□□ -0.91
RHO-201ENST00000296271 ATP5IP56385 69 aaPredicted RBP9.36□□□□□ -0.91
RHO-201ENST00000296271 LCN2P80188 198 aa9.36□□□□□ -0.91
RHO-201ENST00000296271 PRR27Q6MZM9 219 aa9.36□□□□□ -0.91
RHO-201ENST00000296271 BEND2Q8NDZ0 799 aa9.36□□□□□ -0.91
RHO-201ENST00000296271 WNT10AQ9GZT5 417 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms