RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 DPTQ07507 201 aa9.71□□□□□ -0.86
SNIP1-201ENST00000296215 IDI2-AS1Q9NZ38 188 aa9.71□□□□□ -0.86
SNIP1-201ENST00000296215 SLC25A10Q9UBX3 287 aaPredicted RBP9.71□□□□□ -0.86
SNIP1-201ENST00000296215 TP53TG3Q9ULZ0 132 aa9.71□□□□□ -0.86
SNIP1-201ENST00000296215 DIDO1Q9BTC0 2240 aaKnown RBP9.71□□□□□ -0.86
SNIP1-201ENST00000296215 TRBV25-1A0A075B6N4 114 aa9.7□□□□□ -0.86
SNIP1-201ENST00000296215 RPS21P63220 83 aaKnown RBP9.7□□□□□ -0.86
SNIP1-201ENST00000296215 GOLT1AQ6ZVE7 132 aa9.7□□□□□ -0.86
SNIP1-201ENST00000296215 CFHR5Q9BXR6 569 aa9.7□□□□□ -0.86
SNIP1-201ENST00000296215 PROCRQ9UNN8 238 aa9.7□□□□□ -0.86
SNIP1-201ENST00000296215 D6R8Y8 96 aa9.7□□□□□ -0.86
SNIP1-201ENST00000296215 M0R2P5 195 aa9.7□□□□□ -0.86
SNIP1-201ENST00000296215 SMIM10L1P0DMW3 83 aa9.7□□□□□ -0.86
SNIP1-201ENST00000296215 CD24P25063 80 aa9.7□□□□□ -0.86
SNIP1-201ENST00000296215 ZIC1Q15915 447 aa9.7□□□□□ -0.86
SNIP1-201ENST00000296215 TSACCQ96A04 125 aaPredicted RBP9.7□□□□□ -0.86
SNIP1-201ENST00000296215 SMIM10Q96HG1 83 aa9.7□□□□□ -0.86
SNIP1-201ENST00000296215 PRNDQ9UKY0 176 aa9.7□□□□□ -0.86
SNIP1-201ENST00000296215 ARAP2Q8WZ64 1704 aa9.7□□□□□ -0.86
SNIP1-201ENST00000296215 TNFSF14O43557 240 aa9.7□□□□□ -0.86
SNIP1-201ENST00000296215 VKORC1L1Q8N0U8 176 aa9.7□□□□□ -0.86
SNIP1-201ENST00000296215 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.7□□□□□ -0.86
SNIP1-201ENST00000296215 IGKV1D-13A0A0B4J2D9 117 aa9.7□□□□□ -0.86
SNIP1-201ENST00000296215 A0A1W2PQU0 124 aa9.7□□□□□ -0.86
SNIP1-201ENST00000296215 IGKV1-13P0DP09 117 aa9.7□□□□□ -0.86
SNIP1-201ENST00000296215 SPANXN1Q5VSR9 72 aa9.7□□□□□ -0.86
SNIP1-201ENST00000296215 C21orf62Q9NYP8 219 aa9.7□□□□□ -0.86
SNIP1-201ENST00000296215 LINC00527Q9UJ94 153 aa9.7□□□□□ -0.86
SNIP1-201ENST00000296215 TRAV8-3A0A0A6YYJ7 113 aa9.69□□□□□ -0.86
SNIP1-201ENST00000296215 A0A1W2PP55 124 aa9.69□□□□□ -0.86
SNIP1-201ENST00000296215 CRXO43186 299 aaPredicted RBP9.69□□□□□ -0.86
SNIP1-201ENST00000296215 SLC25A48Q6ZT89 311 aaKnown RBP9.69□□□□□ -0.86
SNIP1-201ENST00000296215 TRAV40A0A0B4J280 105 aa9.69□□□□□ -0.86
SNIP1-201ENST00000296215 SMIM27A0A1W2PRY6 76 aa9.69□□□□□ -0.86
SNIP1-201ENST00000296215 F5H697 171 aa9.69□□□□□ -0.86
SNIP1-201ENST00000296215 SYNGR3O43761 229 aa9.69□□□□□ -0.86
SNIP1-201ENST00000296215 PLNP26678 52 aa9.69□□□□□ -0.86
SNIP1-201ENST00000296215 TCF15Q12870 199 aa9.69□□□□□ -0.86
SNIP1-201ENST00000296215 TMEM240Q5SV17 173 aa9.69□□□□□ -0.86
SNIP1-201ENST00000296215 TMEM14EPQ6UXP3 125 aa9.69□□□□□ -0.86
SNIP1-201ENST00000296215 SLC25A39Q9BZJ4 359 aaPredicted RBP9.69□□□□□ -0.86
SNIP1-201ENST00000296215 U3KQE9 123 aa9.69□□□□□ -0.86
SNIP1-201ENST00000296215 TMEM78Q5T7P6 136 aa9.69□□□□□ -0.86
SNIP1-201ENST00000296215 TMEM42Q69YG0 159 aa9.69□□□□□ -0.86
SNIP1-201ENST00000296215 TMEM243Q9BU79 118 aa9.69□□□□□ -0.86
SNIP1-201ENST00000296215 MSRB2Q9Y3D2 182 aa9.69□□□□□ -0.86
SNIP1-201ENST00000296215 LHFPL6Q9Y693 200 aa9.69□□□□□ -0.86
SNIP1-201ENST00000296215 TJP1Q07157 1748 aa9.68□□□□□ -0.86
SNIP1-201ENST00000296215 E9PLD3 99 aa9.68□□□□□ -0.86
SNIP1-201ENST00000296215 LHX8Q68G74 356 aa9.68□□□□□ -0.86
SNIP1-201ENST00000296215 RNF114Q9Y508 228 aa9.68□□□□□ -0.86
SNIP1-201ENST00000296215 SMCHD1A6NHR9 2005 aa9.68□□□□□ -0.86
SNIP1-201ENST00000296215 A0A1W2PPV9 198 aa9.68□□□□□ -0.86
SNIP1-201ENST00000296215 KNCNA6PVL3 124 aa9.68□□□□□ -0.86
SNIP1-201ENST00000296215 TRGV11A0A075B6L2 103 aa9.68□□□□□ -0.86
SNIP1-201ENST00000296215 MRPL33O75394 65 aaKnown RBP9.68□□□□□ -0.86
SNIP1-201ENST00000296215 DUSP14O95147 198 aaKnown RBP9.68□□□□□ -0.86
SNIP1-201ENST00000296215 DNAJC25-GNG10A0A024R161 153 aa9.68□□□□□ -0.86
SNIP1-201ENST00000296215 TRAV4A0A0B4J268 109 aa9.68□□□□□ -0.86
SNIP1-201ENST00000296215 A0A1B0GX51 115 aa9.68□□□□□ -0.86
SNIP1-201ENST00000296215 RBP4P02753 201 aa9.68□□□□□ -0.86
SNIP1-201ENST00000296215 CECR9P0C854 216 aa9.68□□□□□ -0.86
SNIP1-201ENST00000296215 RPL35AP18077 110 aaKnown RBP9.68□□□□□ -0.86
SNIP1-201ENST00000296215 DRAM1Q8N682 238 aa9.68□□□□□ -0.86
SNIP1-201ENST00000296215 TCF19Q9Y242 345 aa9.68□□□□□ -0.86
SNIP1-201ENST00000296215 IGHG4P01861 327 aa9.67□□□□□ -0.86
SNIP1-201ENST00000296215 FGF6P10767 208 aa9.67□□□□□ -0.86
SNIP1-201ENST00000296215 ACP1P24666 158 aa9.67□□□□□ -0.86
SNIP1-201ENST00000296215 PRDX2P32119 198 aa9.67□□□□□ -0.86
SNIP1-201ENST00000296215 TMEM52BQ4KMG9 183 aa9.67□□□□□ -0.86
SNIP1-201ENST00000296215 FMC1Q96HJ9 113 aa9.67□□□□□ -0.86
SNIP1-201ENST00000296215 CALYQ9NYX4 217 aa9.67□□□□□ -0.86
SNIP1-201ENST00000296215 Q8IYB0 196 aa9.67□□□□□ -0.86
SNIP1-201ENST00000296215 WFDC11Q8NEX6 87 aa9.67□□□□□ -0.86
SNIP1-201ENST00000296215 IGKV1D-42A0A075B6H8 117 aa9.67□□□□□ -0.86
SNIP1-201ENST00000296215 QRFPP83859 136 aa9.67□□□□□ -0.86
SNIP1-201ENST00000296215 Q8TCH9 128 aa9.67□□□□□ -0.86
SNIP1-201ENST00000296215 PILRAQ9UKJ1 303 aa9.67□□□□□ -0.86
SNIP1-201ENST00000296215 NRAPQ86VF7 1730 aa9.67□□□□□ -0.86
SNIP1-201ENST00000296215 SIPA1L1O43166 1804 aa9.67□□□□□ -0.86
SNIP1-201ENST00000296215 MAST2Q6P0Q8 1798 aa9.67□□□□□ -0.86
SNIP1-201ENST00000296215 OOSP1A8MZH6 123 aa9.67□□□□□ -0.86
SNIP1-201ENST00000296215 ATP5G1P05496 136 aa9.67□□□□□ -0.86
SNIP1-201ENST00000296215 HIGD1BQ9P298 99 aa9.67□□□□□ -0.86
SNIP1-201ENST00000296215 PRO1854Q9UHT4 67 aa9.67□□□□□ -0.86
SNIP1-201ENST00000296215 FAM90A10PA6NDY2 464 aa9.66□□□□□ -0.86
SNIP1-201ENST00000296215 FAM90A18PA6NE21 464 aa9.66□□□□□ -0.86
SNIP1-201ENST00000296215 FAM90A16PA6NEW6 464 aa9.66□□□□□ -0.86
SNIP1-201ENST00000296215 FAM90A20PA6NIJ5 464 aa9.66□□□□□ -0.86
SNIP1-201ENST00000296215 FAM90A8PA6NJQ4 464 aa9.66□□□□□ -0.86
SNIP1-201ENST00000296215 FAM90A7PA6NKC0 464 aa9.66□□□□□ -0.86
SNIP1-201ENST00000296215 FAM90A22PA8MWA6 464 aa9.66□□□□□ -0.86
SNIP1-201ENST00000296215 FAM90A12PA8MX19 464 aa9.66□□□□□ -0.86
SNIP1-201ENST00000296215 FAM90A5PA8MXJ8 464 aa9.66□□□□□ -0.86
SNIP1-201ENST00000296215 FAM90A23PA8MXZ1 464 aa9.66□□□□□ -0.86
SNIP1-201ENST00000296215 FRMD6-AS1P0C7T7 363 aa9.66□□□□□ -0.86
SNIP1-201ENST00000296215 FAM90A15PP0C7V4 464 aa9.66□□□□□ -0.86
SNIP1-201ENST00000296215 FAM90A13PP0C7W8 464 aa9.66□□□□□ -0.86
SNIP1-201ENST00000296215 FAM90A14PP0C7W9 464 aa9.66□□□□□ -0.86
SNIP1-201ENST00000296215 FAM90A24PP0C7X0 464 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms