RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 COA6Q5JTJ3 125 aaKnown RBP19.13■□□□□ 0.65
TRIM54-201ENST00000296098 LINC00305Q7Z4B0 112 aa19.13■□□□□ 0.65
TRIM54-201ENST00000296098 PERPQ96FX8 193 aa19.13■□□□□ 0.65
TRIM54-201ENST00000296098 TRAV9-1A0A075B6T8 112 aa19.12■□□□□ 0.65
TRIM54-201ENST00000296098 SLC17A3O00476 420 aa19.12■□□□□ 0.65
TRIM54-201ENST00000296098 ERVFC1-1P60608 527 aa19.12■□□□□ 0.65
TRIM54-201ENST00000296098 KLRD1Q13241 179 aa19.12■□□□□ 0.65
TRIM54-201ENST00000296098 MMDQ15546 238 aa19.12■□□□□ 0.65
TRIM54-201ENST00000296098 TIGITQ495A1 244 aa19.12■□□□□ 0.65
TRIM54-201ENST00000296098 PRORYQ9H606 182 aa19.12■□□□□ 0.65
TRIM54-201ENST00000296098 FCN1O00602 326 aa19.12■□□□□ 0.65
TRIM54-201ENST00000296098 FABP1P07148 127 aa19.12■□□□□ 0.65
TRIM54-201ENST00000296098 OR5I1Q13606 314 aa19.12■□□□□ 0.65
TRIM54-201ENST00000296098 SSX2Q16385 188 aa19.12■□□□□ 0.65
TRIM54-201ENST00000296098 GSN-AS1Q9NRJ2 163 aa19.12■□□□□ 0.65
TRIM54-201ENST00000296098 TRAPPC1Q9Y5R8 145 aa19.12■□□□□ 0.65
TRIM54-201ENST00000296098 SPTBN4Q9H254 2564 aa19.11■□□□□ 0.65
TRIM54-201ENST00000296098 IGHV3-21A0A0B4J1V1 117 aa19.11■□□□□ 0.65
TRIM54-201ENST00000296098 ODF3BA8MYP8 253 aa19.11■□□□□ 0.65
TRIM54-201ENST00000296098 ORM2P19652 201 aa19.11■□□□□ 0.65
TRIM54-201ENST00000296098 LGALS4P56470 323 aa19.11■□□□□ 0.65
TRIM54-201ENST00000296098 OR1B1Q8NGR6 318 aa19.11■□□□□ 0.65
TRIM54-201ENST00000296098 IGF2BP2-AS1Q96M15 143 aa19.11■□□□□ 0.65
TRIM54-201ENST00000296098 HIST1H2BLQ99880 126 aa19.11■□□□□ 0.65
TRIM54-201ENST00000296098 SRSF8Q9BRL6 282 aaKnown RBP19.11■□□□□ 0.65
TRIM54-201ENST00000296098 HILPDAQ9Y5L2 63 aa19.11■□□□□ 0.65
TRIM54-201ENST00000296098 DMRT1Q9Y5R6 373 aa19.11■□□□□ 0.65
TRIM54-201ENST00000296098 PRTN3P24158 256 aa19.1■□□□□ 0.65
TRIM54-201ENST00000296098 CFHR4Q92496 578 aa19.1■□□□□ 0.65
TRIM54-201ENST00000296098 FXYD5Q96DB9 178 aa19.1■□□□□ 0.65
TRIM54-201ENST00000296098 RPEL1Q2QD12 228 aa19.1■□□□□ 0.65
TRIM54-201ENST00000296098 PACRGQ96M98 296 aaPredicted RBP19.1■□□□□ 0.65
TRIM54-201ENST00000296098 V9GYV3 84 aa19.1■□□□□ 0.65
TRIM54-201ENST00000296098 STXBP6Q8NFX7 210 aa19.09■□□□□ 0.65
TRIM54-201ENST00000296098 RELNP78509 3460 aa19.09■□□□□ 0.65
TRIM54-201ENST00000296098 NBASA2RRP1 2371 aa19.09■□□□□ 0.65
TRIM54-201ENST00000296098 A0A1W2PPR1 153 aa19.08■□□□□ 0.65
TRIM54-201ENST00000296098 NBR2O15453 112 aa19.08■□□□□ 0.65
TRIM54-201ENST00000296098 CNIH1O95406 144 aa19.08■□□□□ 0.65
TRIM54-201ENST00000296098 PDLIM4P50479 330 aa19.08■□□□□ 0.65
TRIM54-201ENST00000296098 ZNF329Q86UD4 541 aa19.08■□□□□ 0.65
TRIM54-201ENST00000296098 ZZEF1O43149 2961 aa19.08■□□□□ 0.65
TRIM54-201ENST00000296098 HRNRQ86YZ3 2850 aaPredicted RBP19.08■□□□□ 0.65
TRIM54-201ENST00000296098 GCGP01275 180 aa19.08■□□□□ 0.64
TRIM54-201ENST00000296098 GPR6P46095 362 aaPredicted RBP19.08■□□□□ 0.64
TRIM54-201ENST00000296098 LHFPL4Q7Z7J7 247 aa19.08■□□□□ 0.64
TRIM54-201ENST00000296098 CDC42EP3Q9UKI2 254 aa19.08■□□□□ 0.64
TRIM54-201ENST00000296098 LRBAP50851 2863 aa19.07■□□□□ 0.64
TRIM54-201ENST00000296098 HYPMO75409 117 aa19.07■□□□□ 0.64
TRIM54-201ENST00000296098 CNN1P51911 297 aaKnown RBP19.07■□□□□ 0.64
TRIM54-201ENST00000296098 OSTCQ9NRP0 149 aa19.07■□□□□ 0.64
TRIM54-201ENST00000296098 IGLV2-8P01709 118 aa19.07■□□□□ 0.64
TRIM54-201ENST00000296098 CDKN1AP38936 164 aa19.07■□□□□ 0.64
TRIM54-201ENST00000296098 TAS2R60P59551 318 aa19.07■□□□□ 0.64
TRIM54-201ENST00000296098 PEX7O00628 323 aa19.06■□□□□ 0.64
TRIM54-201ENST00000296098 YPEL3P61236 119 aaPredicted RBP19.06■□□□□ 0.64
TRIM54-201ENST00000296098 UNQ6494/PRO21346Q6UXR6 183 aa19.06■□□□□ 0.64
TRIM54-201ENST00000296098 KIR3DL3Q8N743 410 aa19.06■□□□□ 0.64
TRIM54-201ENST00000296098 I3L2K1 104 aa19.05■□□□□ 0.64
TRIM54-201ENST00000296098 NDUFA3O95167 84 aa19.05■□□□□ 0.64
TRIM54-201ENST00000296098 PLP1P60201 277 aa19.05■□□□□ 0.64
TRIM54-201ENST00000296098 NPBQ8NG41 125 aa19.05■□□□□ 0.64
TRIM54-201ENST00000296098 WNT10AQ9GZT5 417 aa19.05■□□□□ 0.64
TRIM54-201ENST00000296098 RNASE7Q9H1E1 156 aaKnown RBP19.05■□□□□ 0.64
TRIM54-201ENST00000296098 GSX1Q9H4S2 264 aaPredicted RBP19.05■□□□□ 0.64
TRIM54-201ENST00000296098 COL6A6A6NMZ7 2263 aa19.05■□□□□ 0.64
TRIM54-201ENST00000296098 A0A1W2PRD5 423 aa19.05■□□□□ 0.64
TRIM54-201ENST00000296098 A0A1W2PRF3 423 aa19.05■□□□□ 0.64
TRIM54-201ENST00000296098 A0A1W2PRM7 423 aa19.05■□□□□ 0.64
TRIM54-201ENST00000296098 ISLRO14498 428 aa19.05■□□□□ 0.64
TRIM54-201ENST00000296098 AMBPP02760 352 aa19.05■□□□□ 0.64
TRIM54-201ENST00000296098 IGLC1P0CG04 106 aa19.05■□□□□ 0.64
TRIM54-201ENST00000296098 MGST1P10620 155 aaKnown RBP19.05■□□□□ 0.64
TRIM54-201ENST00000296098 C1orf122Q6ZSJ8 110 aa19.05■□□□□ 0.64
TRIM54-201ENST00000296098 VMO1Q7Z5L0 202 aa19.05■□□□□ 0.64
TRIM54-201ENST00000296098 UBTD1Q9HAC8 227 aa19.05■□□□□ 0.64
TRIM54-201ENST00000296098 DCHS2Q6V1P9 2916 aa19.04■□□□□ 0.64
TRIM54-201ENST00000296098 ARHGAP32A7KAX9 2087 aa19.04■□□□□ 0.64
TRIM54-201ENST00000296098 IGFBPL1Q8WX77 278 aa19.03■□□□□ 0.64
TRIM54-201ENST00000296098 A6NNC1 897 aa19.03■□□□□ 0.64
TRIM54-201ENST00000296098 CD24P25063 80 aa19.03■□□□□ 0.64
TRIM54-201ENST00000296098 MYCNOSP40205 109 aa19.03■□□□□ 0.64
TRIM54-201ENST00000296098 HES1Q14469 280 aa19.03■□□□□ 0.64
TRIM54-201ENST00000296098 CDPF1Q6NVV7 123 aa19.03■□□□□ 0.64
TRIM54-201ENST00000296098 ITLN2Q8WWU7 325 aaPredicted RBP19.03■□□□□ 0.64
TRIM54-201ENST00000296098 HIST1H1BP16401 226 aaKnown RBP19.02■□□□□ 0.64
TRIM54-201ENST00000296098 ADMP35318 185 aa19.02■□□□□ 0.64
TRIM54-201ENST00000296098 FXYD3Q14802 87 aa19.02■□□□□ 0.64
TRIM54-201ENST00000296098 IBA57Q5T440 356 aaKnown RBP19.02■□□□□ 0.64
TRIM54-201ENST00000296098 CCDC144NLQ6NUI1 221 aa19.02■□□□□ 0.64
TRIM54-201ENST00000296098 OR8I2Q8N0Y5 310 aa19.02■□□□□ 0.64
TRIM54-201ENST00000296098 OR1L6Q8NGR2 347 aa19.02■□□□□ 0.64
TRIM54-201ENST00000296098 BLNKQ8WV28 456 aa19.02■□□□□ 0.64
TRIM54-201ENST00000296098 LINC00479Q96M42 142 aa19.02■□□□□ 0.64
TRIM54-201ENST00000296098 HIGD1AQ9Y241 93 aa19.02■□□□□ 0.64
TRIM54-201ENST00000296098 NDUFS7O75251 213 aa19.01■□□□□ 0.63
TRIM54-201ENST00000296098 SNRPCP09234 159 aaKnown RBP19.01■□□□□ 0.63
TRIM54-201ENST00000296098 GP9P14770 177 aa19.01■□□□□ 0.63
TRIM54-201ENST00000296098 CBLN1P23435 193 aa19.01■□□□□ 0.63
TRIM54-201ENST00000296098 RANP62826 216 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms