RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 NXT2Q9NPJ8 142 aaKnown RBP10.55□□□□□ -0.72
PTCD1-201ENST00000292478 RP1P56715 2156 aa10.55□□□□□ -0.72
PTCD1-201ENST00000292478 FNDC10F2Z333 226 aa10.55□□□□□ -0.72
PTCD1-201ENST00000292478 UBE2CO00762 179 aa10.55□□□□□ -0.72
PTCD1-201ENST00000292478 IGKV1-5P01602 117 aa10.55□□□□□ -0.72
PTCD1-201ENST00000292478 WNT2P09544 360 aa10.55□□□□□ -0.72
PTCD1-201ENST00000292478 PYYP10082 97 aa10.55□□□□□ -0.72
PTCD1-201ENST00000292478 EFNA4P52798 201 aa10.55□□□□□ -0.72
PTCD1-201ENST00000292478 RASL11AQ6T310 242 aa10.55□□□□□ -0.72
PTCD1-201ENST00000292478 FNDC1Q4ZHG4 1894 aaPredicted RBP10.55□□□□□ -0.72
PTCD1-201ENST00000292478 M0R1W7 72 aa10.55□□□□□ -0.72
PTCD1-201ENST00000292478 ITGB1BP1O14713 200 aa10.55□□□□□ -0.72
PTCD1-201ENST00000292478 VDAC2P45880 294 aaPredicted RBP10.55□□□□□ -0.72
PTCD1-201ENST00000292478 SUMO2P61956 95 aaKnown RBP10.55□□□□□ -0.72
PTCD1-201ENST00000292478 FOXL1Q12952 345 aa10.55□□□□□ -0.72
PTCD1-201ENST00000292478 LINC01559Q495D7 138 aa10.55□□□□□ -0.72
PTCD1-201ENST00000292478 MBNL3Q9NUK0 354 aaKnown RBP10.55□□□□□ -0.72
PTCD1-201ENST00000292478 RALGAPA1Q6GYQ0 2036 aa10.55□□□□□ -0.72
PTCD1-201ENST00000292478 ZNF418Q8TF45 676 aaPredicted RBP10.55□□□□□ -0.72
PTCD1-201ENST00000292478 C18orf15Q96N68 181 aa10.55□□□□□ -0.72
PTCD1-201ENST00000292478 VSIRQ9H7M9 311 aa10.55□□□□□ -0.72
PTCD1-201ENST00000292478 EP300Q09472 2414 aaPredicted RBP10.55□□□□□ -0.72
PTCD1-201ENST00000292478 AGMATQ9BSE5 352 aa10.55□□□□□ -0.72
PTCD1-201ENST00000292478 TPTE2P1Q5T6R2 138 aa10.54□□□□□ -0.72
PTCD1-201ENST00000292478 JMJD8Q96S16 334 aa10.54□□□□□ -0.72
PTCD1-201ENST00000292478 TRAV8-6A0A0B4J262 113 aa10.54□□□□□ -0.72
PTCD1-201ENST00000292478 Q6ZS92 163 aa10.54□□□□□ -0.72
PTCD1-201ENST00000292478 ZCCHC24Q8N2G6 241 aaKnown RBP10.54□□□□□ -0.72
PTCD1-201ENST00000292478 OR5AN1Q8NGI8 311 aa10.54□□□□□ -0.72
PTCD1-201ENST00000292478 C20orf204Q6ZNR8 217 aa10.54□□□□□ -0.72
PTCD1-201ENST00000292478 ITLN2Q8WWU7 325 aaPredicted RBP10.54□□□□□ -0.72
PTCD1-201ENST00000292478 IGHV1-3A0A0C4DH29 117 aa10.53□□□□□ -0.72
PTCD1-201ENST00000292478 HIST1H2BKO60814 126 aa10.53□□□□□ -0.72
PTCD1-201ENST00000292478 HIST1H2BJP06899 126 aa10.53□□□□□ -0.72
PTCD1-201ENST00000292478 HIST1H2BOP23527 126 aa10.53□□□□□ -0.72
PTCD1-201ENST00000292478 HIST1H2BBP33778 126 aa10.53□□□□□ -0.72
PTCD1-201ENST00000292478 HIST1H2BDP58876 126 aa10.53□□□□□ -0.72
PTCD1-201ENST00000292478 HIST1H2BCP62807 126 aa10.53□□□□□ -0.72
PTCD1-201ENST00000292478 HIST2H2BEQ16778 126 aa10.53□□□□□ -0.72
PTCD1-201ENST00000292478 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.53□□□□□ -0.72
PTCD1-201ENST00000292478 HIST1H2BHQ93079 126 aa10.53□□□□□ -0.72
PTCD1-201ENST00000292478 HIST1H2BNQ99877 126 aa10.53□□□□□ -0.72
PTCD1-201ENST00000292478 HIST1H2BMQ99879 126 aa10.53□□□□□ -0.72
PTCD1-201ENST00000292478 SMAD7O15105 426 aaKnown RBP10.53□□□□□ -0.72
PTCD1-201ENST00000292478 TMEM50AO95807 157 aa10.53□□□□□ -0.72
PTCD1-201ENST00000292478 SRSF1Q07955 248 aaKnown RBP eCLIP10.53□□□□□ -0.72
PTCD1-201ENST00000292478 GAFA1Q96PS6 74 aa10.53□□□□□ -0.72
PTCD1-201ENST00000292478 A0A1B0GWJ7 208 aa10.53□□□□□ -0.72
PTCD1-201ENST00000292478 HBDP02042 147 aa10.53□□□□□ -0.72
PTCD1-201ENST00000292478 LINC01587Q99440 93 aa10.53□□□□□ -0.72
PTCD1-201ENST00000292478 ST20Q9HBF5 79 aa10.53□□□□□ -0.72
PTCD1-201ENST00000292478 LOC102724200A0A096LPH7 203 aaPredicted RBP10.53□□□□□ -0.72
PTCD1-201ENST00000292478 LINC00614P0C842 121 aa10.53□□□□□ -0.72
PTCD1-201ENST00000292478 PAX8Q06710 450 aa10.53□□□□□ -0.72
PTCD1-201ENST00000292478 C3orf36Q3SXR2 165 aa10.53□□□□□ -0.72
PTCD1-201ENST00000292478 IGHV3-11P01762 117 aa10.52□□□□□ -0.72
PTCD1-201ENST00000292478 OR10W1Q8NGF6 305 aa10.52□□□□□ -0.72
PTCD1-201ENST00000292478 SRSF8Q9BRL6 282 aaKnown RBP10.52□□□□□ -0.72
PTCD1-201ENST00000292478 LYNX1G3V0Z9 82 aa10.52□□□□□ -0.72
PTCD1-201ENST00000292478 LYNX1P0DP58 116 aa10.52□□□□□ -0.72
PTCD1-201ENST00000292478 ORMDL2Q53FV1 153 aa10.52□□□□□ -0.72
PTCD1-201ENST00000292478 GCSAMLQ5JQS6 135 aa10.52□□□□□ -0.72
PTCD1-201ENST00000292478 SPSB3Q6PJ21 355 aa10.52□□□□□ -0.72
PTCD1-201ENST00000292478 C5orf63A6NC05 138 aa10.52□□□□□ -0.73
PTCD1-201ENST00000292478 H0YJW9 148 aa10.52□□□□□ -0.73
PTCD1-201ENST00000292478 FAM19A2Q8N3H0 131 aa10.52□□□□□ -0.73
PTCD1-201ENST00000292478 MRAP2Q96G30 205 aa10.52□□□□□ -0.73
PTCD1-201ENST00000292478 C14orf144Q96I85 54 aa10.52□□□□□ -0.73
PTCD1-201ENST00000292478 MGST2Q99735 147 aa10.52□□□□□ -0.73
PTCD1-201ENST00000292478 TRGV11A0A075B6L2 103 aa10.52□□□□□ -0.73
PTCD1-201ENST00000292478 TRAV41A0A0B4J266 112 aa10.52□□□□□ -0.73
PTCD1-201ENST00000292478 COLCA2A8K830 154 aa10.52□□□□□ -0.73
PTCD1-201ENST00000292478 E9PQ18 207 aa10.52□□□□□ -0.73
PTCD1-201ENST00000292478 REG4Q9BYZ8 158 aa10.52□□□□□ -0.73
PTCD1-201ENST00000292478 SVILO95425 2214 aa10.51□□□□□ -0.73
PTCD1-201ENST00000292478 CMC4P56277 68 aaPredicted RBP10.51□□□□□ -0.73
PTCD1-201ENST00000292478 COQ2Q96H96 371 aa10.51□□□□□ -0.73
PTCD1-201ENST00000292478 CLDN16Q9Y5I7 305 aa10.51□□□□□ -0.73
PTCD1-201ENST00000292478 MLNRO43193 412 aa10.51□□□□□ -0.73
PTCD1-201ENST00000292478 LDLRAD2Q5SZI1 272 aa10.51□□□□□ -0.73
PTCD1-201ENST00000292478 A0A0G2JNJ9 132 aa10.51□□□□□ -0.73
PTCD1-201ENST00000292478 A0A1B0GV90 55 aa10.51□□□□□ -0.73
PTCD1-201ENST00000292478 Q9UFV3 132 aa10.51□□□□□ -0.73
PTCD1-201ENST00000292478 TRAV9-2A0A087WT02 112 aa10.51□□□□□ -0.73
PTCD1-201ENST00000292478 SIGLEC15Q6ZMC9 328 aa10.51□□□□□ -0.73
PTCD1-201ENST00000292478 RPP25LQ8N5L8 163 aaKnown RBP10.51□□□□□ -0.73
PTCD1-201ENST00000292478 TMEM262E9PQX1 116 aa10.5□□□□□ -0.73
PTCD1-201ENST00000292478 VMO1Q7Z5L0 202 aa10.5□□□□□ -0.73
PTCD1-201ENST00000292478 LYPD1Q8N2G4 141 aa10.5□□□□□ -0.73
PTCD1-201ENST00000292478 ST6GALNAC3Q8NDV1 305 aa10.5□□□□□ -0.73
PTCD1-201ENST00000292478 NUDT10Q8NFP7 164 aa10.5□□□□□ -0.73
PTCD1-201ENST00000292478 NUDT11Q96G61 164 aa10.5□□□□□ -0.73
PTCD1-201ENST00000292478 NDUFAF3Q9BU61 184 aa10.5□□□□□ -0.73
PTCD1-201ENST00000292478 IGHV3OR16-8A0A075B7F1 116 aa10.5□□□□□ -0.73
PTCD1-201ENST00000292478 DNAL4O96015 105 aa10.5□□□□□ -0.73
PTCD1-201ENST00000292478 NCOR1P1Q9H4R4 102 aa10.5□□□□□ -0.73
PTCD1-201ENST00000292478 MRPL16Q9NX20 251 aaKnown RBP10.5□□□□□ -0.73
PTCD1-201ENST00000292478 ANAPC10Q9UM13 185 aa10.5□□□□□ -0.73
PTCD1-201ENST00000292478 CD7P09564 240 aa10.5□□□□□ -0.73
PTCD1-201ENST00000292478 MTURNQ8N3F0 131 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms