RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 PSG7Q13046 419 aa9.44□□□□□ -0.9
NPC1L1-201ENST00000289547 ZNF788Q6ZQV5 615 aa9.44□□□□□ -0.9
NPC1L1-201ENST00000289547 RPP21Q9H633 154 aaKnown RBP9.44□□□□□ -0.9
NPC1L1-201ENST00000289547 PRB1P04280 392 aa9.44□□□□□ -0.9
NPC1L1-201ENST00000289547 RPL27AP46776 148 aaKnown RBP9.44□□□□□ -0.9
NPC1L1-201ENST00000289547 RTN4RL2Q86UN3 420 aa9.44□□□□□ -0.9
NPC1L1-201ENST00000289547 C10orf126Q8N4M7 172 aa9.44□□□□□ -0.9
NPC1L1-201ENST00000289547 ZNF319Q9P2F9 582 aa9.44□□□□□ -0.9
NPC1L1-201ENST00000289547 METRNQ9UJH8 293 aa9.44□□□□□ -0.9
NPC1L1-201ENST00000289547 PLPPR1Q8TBJ4 325 aa9.44□□□□□ -0.9
NPC1L1-201ENST00000289547 FOXC2Q99958 501 aa9.44□□□□□ -0.9
NPC1L1-201ENST00000289547 C7orf69Q9H7B7 122 aa9.44□□□□□ -0.9
NPC1L1-201ENST00000289547 TRAV8-2A0A0B4J237 113 aa9.44□□□□□ -0.9
NPC1L1-201ENST00000289547 A0A1W2PRE2 83 aa9.44□□□□□ -0.9
NPC1L1-201ENST00000289547 FAM181BA6NEQ2 426 aa9.44□□□□□ -0.9
NPC1L1-201ENST00000289547 PFN1P07737 140 aaKnown RBP9.44□□□□□ -0.9
NPC1L1-201ENST00000289547 HSD52Q0P140 79 aa9.44□□□□□ -0.9
NPC1L1-201ENST00000289547 ADIPOQQ15848 244 aa9.44□□□□□ -0.9
NPC1L1-201ENST00000289547 ZNF672Q499Z4 452 aaPredicted RBP9.44□□□□□ -0.9
NPC1L1-201ENST00000289547 LEAP2Q969E1 77 aa9.44□□□□□ -0.9
NPC1L1-201ENST00000289547 ZNF837Q96EG3 531 aaPredicted RBP9.44□□□□□ -0.9
NPC1L1-201ENST00000289547 hCG_38984A0A1B0GV85 526 aa9.43□□□□□ -0.9
NPC1L1-201ENST00000289547 NBEAP1P0C6P0 100 aa9.43□□□□□ -0.9
NPC1L1-201ENST00000289547 MC5RP33032 325 aa9.43□□□□□ -0.9
NPC1L1-201ENST00000289547 ZNF474Q6S9Z5 364 aaPredicted RBP9.43□□□□□ -0.9
NPC1L1-201ENST00000289547 ZNF479Q96JC4 524 aa9.43□□□□□ -0.9
NPC1L1-201ENST00000289547 IDI2-AS1Q9NZ38 188 aa9.43□□□□□ -0.9
NPC1L1-201ENST00000289547 A0A1W2PNU3 283 aaPredicted RBP9.43□□□□□ -0.9
NPC1L1-201ENST00000289547 PAX2Q02962 417 aa9.43□□□□□ -0.9
NPC1L1-201ENST00000289547 RBPMS2Q6ZRY4 209 aaKnown RBP9.43□□□□□ -0.9
NPC1L1-201ENST00000289547 REPIN1Q9BWE0 567 aaKnown RBP9.43□□□□□ -0.9
NPC1L1-201ENST00000289547 MRPS16Q9Y3D3 137 aaKnown RBP9.43□□□□□ -0.9
NPC1L1-201ENST00000289547 STAG3L3P0CL85 134 aa9.43□□□□□ -0.9
NPC1L1-201ENST00000289547 CLEC7AQ9BXN2 247 aa9.43□□□□□ -0.9
NPC1L1-201ENST00000289547 MS4A6AQ9H2W1 248 aa9.43□□□□□ -0.9
NPC1L1-201ENST00000289547 COL4A3Q01955 1670 aa9.43□□□□□ -0.9
NPC1L1-201ENST00000289547 TRBV20OR9-2A0A075B6H5 130 aa9.42□□□□□ -0.9
NPC1L1-201ENST00000289547 CRXO43186 299 aaPredicted RBP9.42□□□□□ -0.9
NPC1L1-201ENST00000289547 CACNG7P62955 275 aa9.42□□□□□ -0.9
NPC1L1-201ENST00000289547 GAGE13Q4V321 117 aa9.42□□□□□ -0.9
NPC1L1-201ENST00000289547 LINC00305Q7Z4B0 112 aa9.42□□□□□ -0.9
NPC1L1-201ENST00000289547 MEF2CQ06413 473 aaPredicted RBP9.42□□□□□ -0.9
NPC1L1-201ENST00000289547 VCX2Q9H322 139 aa9.42□□□□□ -0.9
NPC1L1-201ENST00000289547 LGALS3P17931 250 aaKnown RBP9.42□□□□□ -0.9
NPC1L1-201ENST00000289547 ANOS1P23352 680 aa9.42□□□□□ -0.9
NPC1L1-201ENST00000289547 OR9G1Q8NH87 305 aa9.42□□□□□ -0.9
NPC1L1-201ENST00000289547 AGMATQ9BSE5 352 aa9.42□□□□□ -0.9
NPC1L1-201ENST00000289547 CYSLTR1Q9Y271 337 aa9.42□□□□□ -0.9
NPC1L1-201ENST00000289547 IGHV3-72A0A0B4J1Y9 119 aa9.42□□□□□ -0.9
NPC1L1-201ENST00000289547 C12orf77C9JDV5 145 aa9.42□□□□□ -0.9
NPC1L1-201ENST00000289547 TMEM50AO95807 157 aa9.42□□□□□ -0.9
NPC1L1-201ENST00000289547 PSMG4Q5JS54 123 aa9.42□□□□□ -0.9
NPC1L1-201ENST00000289547 IGKV3-7A0A075B6H7 116 aa9.41□□□□□ -0.9
NPC1L1-201ENST00000289547 E9PQ18 207 aa9.41□□□□□ -0.9
NPC1L1-201ENST00000289547 CD5LO43866 347 aa9.41□□□□□ -0.9
NPC1L1-201ENST00000289547 MOSP00540 346 aa9.41□□□□□ -0.9
NPC1L1-201ENST00000289547 RPS20P60866 119 aaKnown RBP9.41□□□□□ -0.9
NPC1L1-201ENST00000289547 KIAA1549LQ6ZVL6 1849 aa9.41□□□□□ -0.9
NPC1L1-201ENST00000289547 ZNF146Q15072 292 aa9.41□□□□□ -0.9
NPC1L1-201ENST00000289547 C3orf36Q3SXR2 165 aa9.41□□□□□ -0.9
NPC1L1-201ENST00000289547 GPR82Q96P67 336 aa9.41□□□□□ -0.9
NPC1L1-201ENST00000289547 CALYQ9NYX4 217 aa9.41□□□□□ -0.9
NPC1L1-201ENST00000289547 WDR83OSQ9Y284 106 aa9.41□□□□□ -0.9
NPC1L1-201ENST00000289547 WNK2Q9Y3S1 2297 aa9.41□□□□□ -0.9
NPC1L1-201ENST00000289547 FCGR2BP31994 310 aaPredicted RBP9.41□□□□□ -0.9
NPC1L1-201ENST00000289547 PRR31Q5SQ13 230 aa9.41□□□□□ -0.9
NPC1L1-201ENST00000289547 KBTBD11-OT1A0A1B0GTJ5 212 aa9.41□□□□□ -0.9
NPC1L1-201ENST00000289547 ETV2O00321 342 aaPredicted RBP9.41□□□□□ -0.9
NPC1L1-201ENST00000289547 DKK1O94907 266 aa9.4□□□□□ -0.9
NPC1L1-201ENST00000289547 REG1AP05451 166 aa9.4□□□□□ -0.9
NPC1L1-201ENST00000289547 IGLC2P0DOY2 106 aa9.4□□□□□ -0.9
NPC1L1-201ENST00000289547 IGLC3P0DOY3 106 aa9.4□□□□□ -0.9
NPC1L1-201ENST00000289547 RPL39P5Q59GN2 51 aa9.4□□□□□ -0.9
NPC1L1-201ENST00000289547 ACP7Q6ZNF0 438 aa9.4□□□□□ -0.9
NPC1L1-201ENST00000289547 TMUB1Q9BVT8 246 aa9.4□□□□□ -0.9
NPC1L1-201ENST00000289547 FBXL7Q9UJT9 491 aa9.4□□□□□ -0.9
NPC1L1-201ENST00000289547 ORMDL3Q8N138 153 aa9.4□□□□□ -0.9
NPC1L1-201ENST00000289547 PROK2Q9HC23 129 aa9.4□□□□□ -0.9
NPC1L1-201ENST00000289547 DENND4AQ7Z401 1863 aa9.4□□□□□ -0.9
NPC1L1-201ENST00000289547 ATP5LO75964 103 aa9.4□□□□□ -0.9
NPC1L1-201ENST00000289547 AREGP15514 252 aa9.4□□□□□ -0.9
NPC1L1-201ENST00000289547 RNF144BQ7Z419 303 aa9.4□□□□□ -0.9
NPC1L1-201ENST00000289547 JPT1Q9UK76 154 aa9.4□□□□□ -0.91
NPC1L1-201ENST00000289547 CGB1A6NKQ9 187 aa9.39□□□□□ -0.91
NPC1L1-201ENST00000289547 B4DSR2 109 aa9.39□□□□□ -0.91
NPC1L1-201ENST00000289547 K7EM74 188 aa9.39□□□□□ -0.91
NPC1L1-201ENST00000289547 TMEM78Q5T7P6 136 aa9.39□□□□□ -0.91
NPC1L1-201ENST00000289547 STPG4Q8N801 248 aa9.39□□□□□ -0.91
NPC1L1-201ENST00000289547 CHCHD1Q96BP2 118 aaKnown RBP9.39□□□□□ -0.91
NPC1L1-201ENST00000289547 IFI27L2Q9H2X8 130 aa9.39□□□□□ -0.91
NPC1L1-201ENST00000289547 ADAMTS9Q9P2N4 1935 aa9.39□□□□□ -0.91
NPC1L1-201ENST00000289547 DOPEY2Q9Y3R5 2298 aa9.39□□□□□ -0.91
NPC1L1-201ENST00000289547 LILRA1O75019 489 aa9.39□□□□□ -0.91
NPC1L1-201ENST00000289547 NMSQ5H8A3 153 aa9.39□□□□□ -0.91
NPC1L1-201ENST00000289547 LYZL4Q96KX0 146 aa9.39□□□□□ -0.91
NPC1L1-201ENST00000289547 GAGE2BQ13066 116 aa9.39□□□□□ -0.91
NPC1L1-201ENST00000289547 GUSBP1Q15486 140 aa9.39□□□□□ -0.91
NPC1L1-201ENST00000289547 EFNB3Q15768 340 aa9.39□□□□□ -0.91
NPC1L1-201ENST00000289547 GAGE2EQ4V326 116 aa9.39□□□□□ -0.91
NPC1L1-201ENST00000289547 ZNF585BQ52M93 769 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms