RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 TCF21O43680 179 aa3.4□□□□□ -1.86
SCN3A-201ENST00000283254 TNFRSF6BO95407 300 aa3.4□□□□□ -1.86
SCN3A-201ENST00000283254 HLA-DQB1P01920 261 aa3.4□□□□□ -1.86
SCN3A-201ENST00000283254 RPL32P62910 135 aaKnown RBP3.4□□□□□ -1.86
SCN3A-201ENST00000283254 PSG7Q13046 419 aa3.4□□□□□ -1.86
SCN3A-201ENST00000283254 PEAR1Q5VY43 1037 aaPredicted RBP3.4□□□□□ -1.86
SCN3A-201ENST00000283254 WNT10AQ9GZT5 417 aa3.4□□□□□ -1.86
SCN3A-201ENST00000283254 ANKRD36A6QL64 1941 aa3.4□□□□□ -1.86
SCN3A-201ENST00000283254 TAF1LQ8IZX4 1826 aa3.4□□□□□ -1.86
SCN3A-201ENST00000283254 TUBGCP6Q96RT7 1819 aa3.4□□□□□ -1.86
SCN3A-201ENST00000283254 CENPVL1A0A0U1RR11 272 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 H0YL77 283 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 EIF4EBP2Q13542 120 aaPredicted RBP3.4□□□□□ -1.87
SCN3A-201ENST00000283254 NSUN5P1Q3KNT7 163 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 HEPN1Q6WQI6 88 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 LINC01356Q8N9X3 169 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 RASL10AQ92737 203 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 EPG5Q9HCE0 2579 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 WISP3O95389 354 aaPredicted RBP3.4□□□□□ -1.87
SCN3A-201ENST00000283254 LGALS1P09382 135 aaKnown RBP3.4□□□□□ -1.87
SCN3A-201ENST00000283254 ZNF660Q6AZW8 331 aaPredicted RBP3.4□□□□□ -1.87
SCN3A-201ENST00000283254 C8orf82Q6P1X6 216 aaPredicted RBP3.4□□□□□ -1.87
SCN3A-201ENST00000283254 MBD3L1Q8WWY6 194 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 C5orf30Q96GV9 206 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 NEUROG3Q9Y4Z2 214 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 UBR3Q6ZT12 1888 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 TRBV7-1A0A0A6YYK4 115 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 EPOPA6NHQ4 379 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 ZNF98A6NK75 572 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 TIMM23O14925 209 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 GREM1O60565 184 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 SMIM10L1P0DMW3 83 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 IGFBP3P17936 291 aaPredicted RBP3.4□□□□□ -1.87
SCN3A-201ENST00000283254 FOXA3P55318 350 aaPredicted RBP3.4□□□□□ -1.87
SCN3A-201ENST00000283254 CT83Q5H943 113 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 ASPHD2Q6ICH7 369 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 OR11H7Q8NGC8 314 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 SMIM10Q96HG1 83 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 CHD5Q8TDI0 1954 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 FREM1Q5H8C1 2179 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 ADARB2-AS1A8MUL3 147 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 CBLN1P23435 193 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 DEFB121Q5J5C9 76 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 RPUSD1Q9UJJ7 312 aaKnown RBP3.4□□□□□ -1.87
SCN3A-201ENST00000283254 ANAPC10Q9UM13 185 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 TNS1Q9HBL0 1735 aaKnown RBP3.4□□□□□ -1.87
SCN3A-201ENST00000283254 MED13Q9UHV7 2174 aa3.4□□□□□ -1.87
SCN3A-201ENST00000283254 TRGV1A0A0A0MS02 117 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 DPM2O94777 84 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 SRSF6Q13247 344 aaKnown RBP3.39□□□□□ -1.87
SCN3A-201ENST00000283254 TEX43Q6ZNM6 134 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 LAMTOR2Q9Y2Q5 125 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 RFNGQ9Y644 331 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 A0A087WWC5 75 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 HIGD1CA8MV81 97 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 LHX2P50458 406 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 EGR4Q05215 589 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 VMO1Q7Z5L0 202 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 WDYHV1Q96HA8 205 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 AMELYQ99218 206 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 IL36BQ9NZH7 164 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 H3BMM0 161 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 UMODP07911 640 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 TMEM155Q4W5P6 130 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 DNAJC30Q96LL9 226 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 PLAC1Q9HBJ0 212 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 SPCS1Q9Y6A9 102 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 C17orf98A8MV24 154 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 CCL20P78556 96 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 ZNF585BQ52M93 769 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 LINC01590Q5TEZ4 76 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 ASCL4Q6XD76 172 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 NEGR1Q7Z3B1 354 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 C9orf106Q8NAJ2 232 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 C18orf15Q96N68 181 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 MPTX1A8MV57 137 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 M0R2P5 195 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 CELA3AP09093 270 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 BIVMQ86UB2 503 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 RFLNBQ8N5W9 214 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 OSTCQ9NRP0 149 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 ZIC3O60481 467 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 IGFBP2P18065 325 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 IGHV1-2P23083 117 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 PDE6HQ13956 83 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 NHLRC3Q5JS37 347 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 LCN12Q6JVE5 192 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 AKIRIN1Q9H9L7 192 aaPredicted RBP3.39□□□□□ -1.87
SCN3A-201ENST00000283254 SPANXA1Q9NS26 97 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 KLF12Q9Y4X4 402 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 KIF13BQ9NQT8 1826 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 MAST4O15021 2626 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 ATRQ13535 2644 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 LEPROTO15243 131 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 ZNHIT1O43257 154 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 PAX4O43316 350 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 PSPNO60542 156 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 FBLIM1Q8WUP2 373 aa3.39□□□□□ -1.87
SCN3A-201ENST00000283254 SRSF8Q9BRL6 282 aaKnown RBP3.39□□□□□ -1.87
SCN3A-201ENST00000283254 ZNF646O15015 1829 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms