RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 PRR20CP86479 221 aa4.85□□□□□ -1.63
TNFSF4-201ENST00000281834 PRR20DP86480 221 aa4.85□□□□□ -1.63
TNFSF4-201ENST00000281834 PRR20BP86481 221 aa4.85□□□□□ -1.63
TNFSF4-201ENST00000281834 PRR20AP86496 221 aa4.85□□□□□ -1.63
TNFSF4-201ENST00000281834 FBLN7Q53RD9 439 aa4.85□□□□□ -1.63
TNFSF4-201ENST00000281834 LINC00305Q7Z4B0 112 aa4.85□□□□□ -1.63
TNFSF4-201ENST00000281834 MMD2Q8IY49 270 aa4.85□□□□□ -1.63
TNFSF4-201ENST00000281834 OR2T10Q8NGZ9 312 aa4.85□□□□□ -1.63
TNFSF4-201ENST00000281834 ZNF596Q8TC21 504 aa4.85□□□□□ -1.63
TNFSF4-201ENST00000281834 C22orf15Q8WYQ4 148 aa4.85□□□□□ -1.63
TNFSF4-201ENST00000281834 RNASE7Q9H1E1 156 aaKnown RBP4.85□□□□□ -1.63
TNFSF4-201ENST00000281834 DNAJC4Q9NNZ3 241 aa4.85□□□□□ -1.63
TNFSF4-201ENST00000281834 MIOXQ9UGB7 285 aa4.85□□□□□ -1.63
TNFSF4-201ENST00000281834 IGLV1-47P01700 117 aa4.85□□□□□ -1.63
TNFSF4-201ENST00000281834 FOLR2P14207 255 aa4.85□□□□□ -1.63
TNFSF4-201ENST00000281834 LGALS7P47929 136 aa4.85□□□□□ -1.63
TNFSF4-201ENST00000281834 MFAP2P55001 183 aa4.85□□□□□ -1.63
TNFSF4-201ENST00000281834 TMEM30BQ3MIR4 351 aa4.85□□□□□ -1.63
TNFSF4-201ENST00000281834 CENPWQ5EE01 88 aa4.85□□□□□ -1.63
TNFSF4-201ENST00000281834 IMMP2LQ96T52 175 aa4.85□□□□□ -1.63
TNFSF4-201ENST00000281834 BPESC1Q9GZL8 116 aa4.85□□□□□ -1.63
TNFSF4-201ENST00000281834 HELTA6NFD8 242 aa4.84□□□□□ -1.63
TNFSF4-201ENST00000281834 GGTLC3B5MD39 225 aa4.84□□□□□ -1.63
TNFSF4-201ENST00000281834 PRB1P04280 392 aa4.84□□□□□ -1.63
TNFSF4-201ENST00000281834 C8orf88P0DMB2 117 aa4.84□□□□□ -1.63
TNFSF4-201ENST00000281834 ZFP36P26651 326 aaKnown RBP4.84□□□□□ -1.63
TNFSF4-201ENST00000281834 GNG4P50150 75 aa4.84□□□□□ -1.63
TNFSF4-201ENST00000281834 TAS2R45P59539 299 aa4.84□□□□□ -1.63
TNFSF4-201ENST00000281834 SFRP2Q96HF1 295 aa4.84□□□□□ -1.63
TNFSF4-201ENST00000281834 DPM3Q9P2X0 92 aa4.84□□□□□ -1.63
TNFSF4-201ENST00000281834 IGLC7A0M8Q6 106 aa4.84□□□□□ -1.63
TNFSF4-201ENST00000281834 FRMD6-AS1P0C7T7 363 aa4.84□□□□□ -1.63
TNFSF4-201ENST00000281834 CDPF1Q6NVV7 123 aa4.84□□□□□ -1.63
TNFSF4-201ENST00000281834 MALSU1Q96EH3 234 aa4.84□□□□□ -1.63
TNFSF4-201ENST00000281834 ZNF503Q96F45 646 aa4.84□□□□□ -1.63
TNFSF4-201ENST00000281834 PAXXQ9BUH6 204 aa4.84□□□□□ -1.63
TNFSF4-201ENST00000281834 WNT10AQ9GZT5 417 aa4.84□□□□□ -1.63
TNFSF4-201ENST00000281834 GRIFINA4D1Z8 144 aa4.84□□□□□ -1.64
TNFSF4-201ENST00000281834 CXorf65A6NEN9 183 aa4.84□□□□□ -1.64
TNFSF4-201ENST00000281834 FBXL19-AS1Q494R0 122 aa4.84□□□□□ -1.64
TNFSF4-201ENST00000281834 KCNIP4Q6PIL6 250 aa4.84□□□□□ -1.64
TNFSF4-201ENST00000281834 VMO1Q7Z5L0 202 aa4.84□□□□□ -1.64
TNFSF4-201ENST00000281834 OR10G8Q8NGN5 311 aa4.84□□□□□ -1.64
TNFSF4-201ENST00000281834 NRGNQ92686 78 aa4.84□□□□□ -1.64
TNFSF4-201ENST00000281834 YPEL4Q96NS1 127 aa4.84□□□□□ -1.64
TNFSF4-201ENST00000281834 XKRY2A2RUG3 117 aa4.83□□□□□ -1.64
TNFSF4-201ENST00000281834 VENTXO95231 258 aa4.83□□□□□ -1.64
TNFSF4-201ENST00000281834 PFN1P07737 140 aaKnown RBP4.83□□□□□ -1.64
TNFSF4-201ENST00000281834 CBLN1P23435 193 aa4.83□□□□□ -1.64
TNFSF4-201ENST00000281834 TIGITQ495A1 244 aa4.83□□□□□ -1.64
TNFSF4-201ENST00000281834 DYNAPQ8N1N2 210 aa4.83□□□□□ -1.64
TNFSF4-201ENST00000281834 LINC00311Q8N616 119 aa4.83□□□□□ -1.64
TNFSF4-201ENST00000281834 CHODLQ9H9P2 273 aa4.83□□□□□ -1.64
TNFSF4-201ENST00000281834 TMEM167BQ9NRX6 74 aa4.83□□□□□ -1.64
TNFSF4-201ENST00000281834 GAR1Q9NY12 217 aaKnown RBP4.83□□□□□ -1.64
TNFSF4-201ENST00000281834 LINC00527Q9UJ94 153 aa4.83□□□□□ -1.64
TNFSF4-201ENST00000281834 K7EN84 100 aa4.83□□□□□ -1.64
TNFSF4-201ENST00000281834 UBE2CO00762 179 aa4.83□□□□□ -1.64
TNFSF4-201ENST00000281834 SLC25A5P05141 298 aaKnown RBP4.83□□□□□ -1.64
TNFSF4-201ENST00000281834 BPIFB3P59826 476 aa4.83□□□□□ -1.64
TNFSF4-201ENST00000281834 KIAA1644Q3SXP7 199 aa4.83□□□□□ -1.64
TNFSF4-201ENST00000281834 TPTE2P1Q5T6R2 138 aa4.83□□□□□ -1.64
TNFSF4-201ENST00000281834 MRPL54Q6P161 138 aaKnown RBP4.83□□□□□ -1.64
TNFSF4-201ENST00000281834 PATE2Q6UY27 113 aa4.83□□□□□ -1.64
TNFSF4-201ENST00000281834 OR8I2Q8N0Y5 310 aa4.83□□□□□ -1.64
TNFSF4-201ENST00000281834 CTDSP1Q9GZU7 261 aa4.83□□□□□ -1.64
TNFSF4-201ENST00000281834 ZMAT5Q9UDW3 170 aaKnown RBP4.83□□□□□ -1.64
TNFSF4-201ENST00000281834 AMMECR1Q9Y4X0 333 aaPredicted RBP4.83□□□□□ -1.64
TNFSF4-201ENST00000281834 ANKRD17O75179 2603 aaKnown RBP4.83□□□□□ -1.64
TNFSF4-201ENST00000281834 IGHV3OR16-13A0A075B7E8 117 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 IGHV3-74A0A0B4J1X5 117 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 TCRBV4S1A1TA0A5B7 111 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 A1L4Q6 167 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 IGHV2-5P01817 119 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 IER3P46695 156 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 COMPP49747 757 aaPredicted RBP4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 ECSCRQ19T08 205 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 C9orf152Q5JTZ5 239 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 TEX38Q6PEX7 206 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 EAF1Q96JC9 268 aaPredicted RBP4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 TMUB1Q9BVT8 246 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 OR51M1Q9H341 326 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 TRAPPC1Q9Y5R8 145 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 PGPA6NDG6 321 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 IFITM10A6NMD0 228 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 PSG1P11464 419 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 FAM209BQ5JX69 171 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 ITLN2Q8WWU7 325 aaPredicted RBP4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 CACNG8Q8WXS5 425 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 ANAPC16Q96DE5 110 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 RBM14Q96PK6 669 aaKnown RBP4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 RASL11BQ9BPW5 248 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 SLC25A2Q9BXI2 301 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 TRBV24-1A0A075B6N3 115 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 IGKV1D-37A0A075B6S9 117 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 TRAV8-1A0A0A6YYK1 113 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 NBR2O15453 112 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 CEACAM3P40198 252 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 MRGPRG-AS1Q2M3A8 158 aa4.82□□□□□ -1.64
TNFSF4-201ENST00000281834 BRD3OSQ6XYD6 125 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms