RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 CLEC5AQ9NY25 188 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 ZNF581Q9P0T4 197 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 PAM16Q9Y3D7 125 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 HILPDAQ9Y5L2 63 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 HIVEP3Q5T1R4 2406 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 HEATR5AQ86XA9 2040 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 IGKV1-27A0A075B6S5 117 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 TMSB15BA0A087X1C1 80 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 IGLV3-32A0A0A0MS00 114 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 PQLC2LA1A4F0 135 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 M0R2Z0 102 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 CCL21O00585 134 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 P01737 135 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 REG1AP05451 166 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 CD55P08174 381 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 TRGC1P0CF51 173 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 CCL1P22362 96 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 S100A4P26447 101 aaKnown RBP2.35□□□□□ -2.03
HERC4-201ENST00000277817 CEACAM3P40198 252 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 ID1P41134 155 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 PTGDSP41222 190 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 LHX2P50458 406 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 MFAP2P55001 183 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 HSPE1P61604 102 aaKnown RBP2.35□□□□□ -2.03
HERC4-201ENST00000277817 SUPT4H1P63272 117 aaKnown RBP2.35□□□□□ -2.03
HERC4-201ENST00000277817 MMDQ15546 238 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 HIST3H3Q16695 136 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 TMEM183BQ1AE95 376 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 ZNF672Q499Z4 452 aaPredicted RBP2.35□□□□□ -2.03
HERC4-201ENST00000277817 ZNF841Q6ZN19 808 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 OR8I2Q8N0Y5 310 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 OR52E5Q8NH55 327 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 RASL11BQ9BPW5 248 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 OR51M1Q9H341 326 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 UBTD1Q9HAC8 227 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 THYN1Q9P016 225 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 ZNF292O60281 2723 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 IGKV3-7A0A075B6H7 116 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 H3BTX0 84 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 NDUFS7O75251 213 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 APCSP02743 223 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 CECR9P0C854 216 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 ARL14EPLP0DKL9 152 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 IGHV1-2P23083 117 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 CRYBB3P26998 211 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 HILS1P60008 231 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 RPL8P62917 257 aaKnown RBP2.35□□□□□ -2.03
HERC4-201ENST00000277817 FXYD3Q14802 87 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 KIAA1644Q3SXP7 199 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 Q6ZN92 141 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 MMD2Q8IY49 270 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 EIF4E3Q8N5X7 224 aaKnown RBP2.35□□□□□ -2.03
HERC4-201ENST00000277817 TCTEX1D1Q8N7M0 179 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 OR13A1Q8NGR1 328 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 PLPPR1Q8TBJ4 325 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 NABP1Q96AH0 204 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 TBX15Q96SF7 602 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 P2RX4Q99571 388 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 PAXXQ9BUH6 204 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 PARLQ9H300 379 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 WFDC1Q9HC57 220 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 COA4Q9NYJ1 87 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 TCF19Q9Y242 345 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 CARHSP1Q9Y2V2 147 aaKnown RBP2.35□□□□□ -2.03
HERC4-201ENST00000277817 WASHC3Q9Y3C0 194 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 RFNGQ9Y644 331 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 LRRK1Q38SD2 2015 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 PKDREJQ9NTG1 2253 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 DNAH12Q6ZR08 3092 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 COL6A6A6NMZ7 2263 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 WNK2Q9Y3S1 2297 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 MYO7BQ6PIF6 2116 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 PGPA6NDG6 321 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 M0R143 59 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 MPDU1O75352 247 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 HYPMO75409 117 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 SRP19P09132 144 aaKnown RBP2.35□□□□□ -2.03
HERC4-201ENST00000277817 OR5AL1P0C617 328 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 LINC00869P0C866 280 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 WT1P19544 449 aaPredicted RBP2.35□□□□□ -2.03
HERC4-201ENST00000277817 SEC61BP60468 96 aaKnown RBP2.35□□□□□ -2.03
HERC4-201ENST00000277817 PKIAP61925 76 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 LRRC75BQ2VPJ9 315 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 SLC35E4Q6ICL7 350 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 ACP7Q6ZNF0 438 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 C1orf174Q8IYL3 243 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 ZCCHC24Q8N2G6 241 aaKnown RBP2.35□□□□□ -2.03
HERC4-201ENST00000277817 C5orf17Q8NAS9 161 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 OR8B3Q8NGG8 313 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 C18orf12Q96KH6 178 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 OR8B2Q96RD0 313 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 RNF2Q99496 336 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 TNFRSF19Q9NS68 423 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 ANK3Q12955 4377 aaKnown RBP2.35□□□□□ -2.03
HERC4-201ENST00000277817 INTS1Q8N201 2190 aaKnown RBP2.35□□□□□ -2.03
HERC4-201ENST00000277817 MYO15AQ9UKN7 3530 aa2.35□□□□□ -2.03
HERC4-201ENST00000277817 ZNF407Q9C0G0 2248 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 TRBV6-7A0A0A0MS04 114 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 GRIFINA4D1Z8 144 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 CDX4O14627 284 aaPredicted RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms