RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 PRB1P04280 392 aa16.84■□□□□ 0.29
CACNA1B-201ENST00000277549 SMIM10L1P0DMW3 83 aa16.84■□□□□ 0.29
CACNA1B-201ENST00000277549 SSBP2P81877 361 aaPredicted RBP16.84■□□□□ 0.29
CACNA1B-201ENST00000277549 SMIM10Q96HG1 83 aa16.84■□□□□ 0.29
CACNA1B-201ENST00000277549 B4DSR2 109 aa16.84■□□□□ 0.29
CACNA1B-201ENST00000277549 TCRAP04437 139 aa16.84■□□□□ 0.29
CACNA1B-201ENST00000277549 Q8TAT8 98 aa16.84■□□□□ 0.29
CACNA1B-201ENST00000277549 CLPSL2Q6UWE3 100 aa16.83■□□□□ 0.29
CACNA1B-201ENST00000277549 LINC01356Q8N9X3 169 aa16.83■□□□□ 0.29
CACNA1B-201ENST00000277549 FGFBP3Q8TAT2 258 aa16.83■□□□□ 0.29
CACNA1B-201ENST00000277549 DERL1Q9BUN8 251 aa16.83■□□□□ 0.29
CACNA1B-201ENST00000277549 XCL2Q9UBD3 114 aa16.83■□□□□ 0.29
CACNA1B-201ENST00000277549 C1QTNF5Q9BXJ0 243 aa16.83■□□□□ 0.29
CACNA1B-201ENST00000277549 BPESC1Q9GZL8 116 aa16.83■□□□□ 0.29
CACNA1B-201ENST00000277549 DLX4Q92988 240 aaPredicted RBP16.83■□□□□ 0.28
CACNA1B-201ENST00000277549 SCRT1Q9BWW7 348 aa16.83■□□□□ 0.28
CACNA1B-201ENST00000277549 CA7P43166 264 aa16.82■□□□□ 0.28
CACNA1B-201ENST00000277549 SPSB3Q6PJ21 355 aa16.82■□□□□ 0.28
CACNA1B-201ENST00000277549 LTBP4Q8N2S1 1624 aa16.82■□□□□ 0.28
CACNA1B-201ENST00000277549 C1QL4Q86Z23 238 aa16.82■□□□□ 0.28
CACNA1B-201ENST00000277549 TMEM14DPA8MWL7 114 aa16.82■□□□□ 0.28
CACNA1B-201ENST00000277549 SNRNP200O75643 2136 aaKnown RBP16.82■□□□□ 0.28
CACNA1B-201ENST00000277549 LOC102723996A0A087X1L8 192 aa16.82■□□□□ 0.28
CACNA1B-201ENST00000277549 CD59P13987 128 aa16.82■□□□□ 0.28
CACNA1B-201ENST00000277549 COL8A2P25067 703 aa16.82■□□□□ 0.28
CACNA1B-201ENST00000277549 DDTP30046 118 aa16.82■□□□□ 0.28
CACNA1B-201ENST00000277549 DAD1P61803 113 aa16.82■□□□□ 0.28
CACNA1B-201ENST00000277549 RNF114Q9Y508 228 aa16.82■□□□□ 0.28
CACNA1B-201ENST00000277549 DMRT1Q9Y5R6 373 aa16.82■□□□□ 0.28
CACNA1B-201ENST00000277549 PMS2P5A8MQ11 134 aa16.82■□□□□ 0.28
CACNA1B-201ENST00000277549 NAA38Q9BRA0 125 aaKnown RBP16.82■□□□□ 0.28
CACNA1B-201ENST00000277549 APC2O95996 2303 aa16.82■□□□□ 0.28
CACNA1B-201ENST00000277549 HOXD3P31249 432 aaPredicted RBP16.81■□□□□ 0.28
CACNA1B-201ENST00000277549 RPL36AP83881 106 aaKnown RBP16.81■□□□□ 0.28
CACNA1B-201ENST00000277549 RPL36ALQ969Q0 106 aaKnown RBP16.81■□□□□ 0.28
CACNA1B-201ENST00000277549 C1QTNF9P0C862 333 aa16.81■□□□□ 0.28
CACNA1B-201ENST00000277549 TMEM126AQ9H061 195 aa16.81■□□□□ 0.28
CACNA1B-201ENST00000277549 IGKV1D-13A0A0B4J2D9 117 aa16.81■□□□□ 0.28
CACNA1B-201ENST00000277549 IGKV1-13P0DP09 117 aa16.81■□□□□ 0.28
CACNA1B-201ENST00000277549 PRTN3P24158 256 aa16.81■□□□□ 0.28
CACNA1B-201ENST00000277549 ZNF562Q6V9R5 426 aa16.81■□□□□ 0.28
CACNA1B-201ENST00000277549 EPDR1Q9UM22 224 aa16.81■□□□□ 0.28
CACNA1B-201ENST00000277549 PVRIGQ6DKI7 326 aa16.81■□□□□ 0.28
CACNA1B-201ENST00000277549 NDUFS5O43920 106 aa16.8■□□□□ 0.28
CACNA1B-201ENST00000277549 C15orf61A6NNL5 157 aa16.8■□□□□ 0.28
CACNA1B-201ENST00000277549 DPM2O94777 84 aa16.8■□□□□ 0.28
CACNA1B-201ENST00000277549 IGKCP01834 107 aa16.8■□□□□ 0.28
CACNA1B-201ENST00000277549 UNC13CQ8NB66 2214 aa16.8■□□□□ 0.28
CACNA1B-201ENST00000277549 ZNF883P0CG24 379 aa16.8■□□□□ 0.28
CACNA1B-201ENST00000277549 MEGF9Q9H1U4 602 aa16.8■□□□□ 0.28
CACNA1B-201ENST00000277549 GREM1O60565 184 aa16.8■□□□□ 0.28
CACNA1B-201ENST00000277549 ZNF561-AS1K7EIQ3 104 aa16.79■□□□□ 0.28
CACNA1B-201ENST00000277549 PQLC2LA1A4F0 135 aa16.79■□□□□ 0.28
CACNA1B-201ENST00000277549 FOXG1P55316 489 aaPredicted RBP16.79■□□□□ 0.28
CACNA1B-201ENST00000277549 LYZL4Q96KX0 146 aa16.79■□□□□ 0.28
CACNA1B-201ENST00000277549 OVOL1O14753 267 aa16.79■□□□□ 0.28
CACNA1B-201ENST00000277549 LINC01590Q5TEZ4 76 aa16.79■□□□□ 0.28
CACNA1B-201ENST00000277549 NHSL1Q5SYE7 1610 aa16.79■□□□□ 0.28
CACNA1B-201ENST00000277549 GAGE12JA6NER3 117 aa16.79■□□□□ 0.28
CACNA1B-201ENST00000277549 GAGE1Q13065 139 aa16.79■□□□□ 0.28
CACNA1B-201ENST00000277549 GAGE4Q13068 117 aa16.79■□□□□ 0.28
CACNA1B-201ENST00000277549 GAGE5Q13069 117 aa16.79■□□□□ 0.28
CACNA1B-201ENST00000277549 GAGE13Q4V321 117 aa16.79■□□□□ 0.28
CACNA1B-201ENST00000277549 ORAOV1Q8WV07 137 aa16.79■□□□□ 0.28
CACNA1B-201ENST00000277549 IGLV2-23P01705 113 aa16.78■□□□□ 0.28
CACNA1B-201ENST00000277549 TEX38Q6PEX7 206 aa16.78■□□□□ 0.28
CACNA1B-201ENST00000277549 GHRHP01286 108 aa16.78■□□□□ 0.28
CACNA1B-201ENST00000277549 NUP214P35658 2090 aaPredicted RBP16.78■□□□□ 0.28
CACNA1B-201ENST00000277549 PLNP26678 52 aa16.78■□□□□ 0.28
CACNA1B-201ENST00000277549 PAX9P55771 341 aa16.78■□□□□ 0.28
CACNA1B-201ENST00000277549 TPTE2P1Q5T6R2 138 aa16.78■□□□□ 0.28
CACNA1B-201ENST00000277549 KLK9Q9UKQ9 250 aa16.78■□□□□ 0.28
CACNA1B-201ENST00000277549 MS4A6AQ9H2W1 248 aa16.78■□□□□ 0.28
CACNA1B-201ENST00000277549 DICER1Q9UPY3 1922 aaKnown RBP16.78■□□□□ 0.28
CACNA1B-201ENST00000277549 IGHV1-3A0A0C4DH29 117 aa16.77■□□□□ 0.28
CACNA1B-201ENST00000277549 NMBP08949 121 aa16.77■□□□□ 0.28
CACNA1B-201ENST00000277549 CSRP1P21291 193 aaKnown RBP16.77■□□□□ 0.28
CACNA1B-201ENST00000277549 DEFB131AP59861 70 aa16.77■□□□□ 0.28
CACNA1B-201ENST00000277549 RNF166Q96A37 237 aaPredicted RBP16.77■□□□□ 0.28
CACNA1B-201ENST00000277549 RTBDNQ9BSG5 229 aaPredicted RBP16.77■□□□□ 0.28
CACNA1B-201ENST00000277549 SS18Q15532 418 aa16.77■□□□□ 0.28
CACNA1B-201ENST00000277549 SMDT1Q9H4I9 107 aa16.77■□□□□ 0.28
CACNA1B-201ENST00000277549 CTHRC1Q96CG8 243 aa16.77■□□□□ 0.28
CACNA1B-201ENST00000277549 VWC2LB2RUY7 222 aa16.77■□□□□ 0.28
CACNA1B-201ENST00000277549 ITGB1BP1O14713 200 aa16.77■□□□□ 0.28
CACNA1B-201ENST00000277549 DKK1O94907 266 aa16.77■□□□□ 0.28
CACNA1B-201ENST00000277549 UCP3P55916 312 aa16.77■□□□□ 0.28
CACNA1B-201ENST00000277549 MTCL1Q9Y4B5 1905 aaKnown RBP16.77■□□□□ 0.28
CACNA1B-201ENST00000277549 TRAV25A0A0B4J276 109 aa16.77■□□□□ 0.27
CACNA1B-201ENST00000277549 SPATA31B1PQ5VZV4 182 aa16.77■□□□□ 0.27
CACNA1B-201ENST00000277549 RGPD3A6NKT7 1758 aaPredicted RBP16.77■□□□□ 0.27
CACNA1B-201ENST00000277549 PPP1R3EQ9H7J1 279 aa16.77■□□□□ 0.27
CACNA1B-201ENST00000277549 RBM38Q9H0Z9 239 aaKnown RBP16.76■□□□□ 0.27
CACNA1B-201ENST00000277549 CLDN16Q9Y5I7 305 aa16.76■□□□□ 0.27
CACNA1B-201ENST00000277549 TEX43Q6ZNM6 134 aa16.76■□□□□ 0.27
CACNA1B-201ENST00000277549 A0A087WV48 116 aa16.76■□□□□ 0.27
CACNA1B-201ENST00000277549 C14orf178Q8N769 122 aaPredicted RBP16.76■□□□□ 0.27
CACNA1B-201ENST00000277549 CKAP5Q14008 2032 aa16.76■□□□□ 0.27
CACNA1B-201ENST00000277549 PRCDQ00LT1 54 aa16.76■□□□□ 0.27
CACNA1B-201ENST00000277549 THAP8Q8NA92 274 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms