RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 HEATR1Q9H583 2144 aaKnown RBP10.44□□□□□ -0.74
C9orf3-201ENST00000277198 C17orf100A8MU93 164 aa10.44□□□□□ -0.74
C9orf3-201ENST00000277198 NDUFB7P17568 137 aa10.44□□□□□ -0.74
C9orf3-201ENST00000277198 IER3P46695 156 aa10.44□□□□□ -0.74
C9orf3-201ENST00000277198 RASL11AQ6T310 242 aa10.44□□□□□ -0.74
C9orf3-201ENST00000277198 OR8I2Q8N0Y5 310 aa10.44□□□□□ -0.74
C9orf3-201ENST00000277198 A0A1W2PPR1 153 aa10.43□□□□□ -0.74
C9orf3-201ENST00000277198 SMIM27A0A1W2PRY6 76 aa10.43□□□□□ -0.74
C9orf3-201ENST00000277198 GRIFINA4D1Z8 144 aa10.43□□□□□ -0.74
C9orf3-201ENST00000277198 SUMO1P63165 101 aaKnown RBP10.43□□□□□ -0.74
C9orf3-201ENST00000277198 OR5I1Q13606 314 aa10.43□□□□□ -0.74
C9orf3-201ENST00000277198 USF2Q15853 346 aaPredicted RBP10.43□□□□□ -0.74
C9orf3-201ENST00000277198 BAGE3Q86Y29 109 aa10.43□□□□□ -0.74
C9orf3-201ENST00000277198 BAGE2Q86Y30 109 aa10.43□□□□□ -0.74
C9orf3-201ENST00000277198 OR5AU1Q8NGC0 362 aa10.43□□□□□ -0.74
C9orf3-201ENST00000277198 OR9G1Q8NH87 305 aa10.43□□□□□ -0.74
C9orf3-201ENST00000277198 FAM167A-AS1Q96KT0 104 aa10.43□□□□□ -0.74
C9orf3-201ENST00000277198 IGF2BP2-AS1Q96M15 143 aa10.43□□□□□ -0.74
C9orf3-201ENST00000277198 C20orf144Q9BQM9 153 aa10.43□□□□□ -0.74
C9orf3-201ENST00000277198 MRPL20Q9BYC9 149 aaKnown RBP10.43□□□□□ -0.74
C9orf3-201ENST00000277198 VPS13CQ709C8 3753 aa10.43□□□□□ -0.74
C9orf3-201ENST00000277198 SIAH2O43255 324 aa10.43□□□□□ -0.74
C9orf3-201ENST00000277198 SERF1AO75920 110 aa10.43□□□□□ -0.74
C9orf3-201ENST00000277198 HLA-DQA1P01909 254 aa10.43□□□□□ -0.74
C9orf3-201ENST00000277198 ZNF137PP52743 207 aa10.43□□□□□ -0.74
C9orf3-201ENST00000277198 LINC00310P59036 64 aa10.43□□□□□ -0.74
C9orf3-201ENST00000277198 IBA57Q5T440 356 aaKnown RBP10.43□□□□□ -0.74
C9orf3-201ENST00000277198 TEX43Q6ZNM6 134 aa10.43□□□□□ -0.74
C9orf3-201ENST00000277198 MOB3BQ86TA1 216 aa10.43□□□□□ -0.74
C9orf3-201ENST00000277198 TEP1Q99973 2627 aaKnown RBP10.43□□□□□ -0.74
C9orf3-201ENST00000277198 DSCAML1Q8TD84 2053 aa10.42□□□□□ -0.74
C9orf3-201ENST00000277198 A0A1B0GUS0 222 aa10.42□□□□□ -0.74
C9orf3-201ENST00000277198 VSTM5A8MXK1 200 aa10.42□□□□□ -0.74
C9orf3-201ENST00000277198 C16orf97H3BN30 126 aa10.42□□□□□ -0.74
C9orf3-201ENST00000277198 M0QZK8 103 aa10.42□□□□□ -0.74
C9orf3-201ENST00000277198 M0R143 59 aa10.42□□□□□ -0.74
C9orf3-201ENST00000277198 IGLV2-8P01709 118 aa10.42□□□□□ -0.74
C9orf3-201ENST00000277198 BRS3P32247 399 aa10.42□□□□□ -0.74
C9orf3-201ENST00000277198 BPIFB3P59826 476 aa10.42□□□□□ -0.74
C9orf3-201ENST00000277198 FAM231DQ6ZW35 169 aa10.42□□□□□ -0.74
C9orf3-201ENST00000277198 Q6ZWC4 215 aa10.42□□□□□ -0.74
C9orf3-201ENST00000277198 THAP8Q8NA92 274 aa10.42□□□□□ -0.74
C9orf3-201ENST00000277198 WFIKKN1Q96NZ8 548 aa10.42□□□□□ -0.74
C9orf3-201ENST00000277198 TBX15Q96SF7 602 aa10.42□□□□□ -0.74
C9orf3-201ENST00000277198 CHRDL1Q9BU40 450 aa10.42□□□□□ -0.74
C9orf3-201ENST00000277198 DSCAMO60469 2012 aa10.42□□□□□ -0.74
C9orf3-201ENST00000277198 PPIAL4EA0A075B759 164 aa10.41□□□□□ -0.74
C9orf3-201ENST00000277198 A6NNC1 897 aa10.41□□□□□ -0.74
C9orf3-201ENST00000277198 ZNF705FA8MVS1 300 aaPredicted RBP10.41□□□□□ -0.74
C9orf3-201ENST00000277198 PPIAL4DF5H284 164 aa10.41□□□□□ -0.74
C9orf3-201ENST00000277198 AMY1AP04745 511 aa10.41□□□□□ -0.74
C9orf3-201ENST00000277198 REG1AP05451 166 aa10.41□□□□□ -0.74
C9orf3-201ENST00000277198 ZNF705DP0CH99 300 aaPredicted RBP10.41□□□□□ -0.74
C9orf3-201ENST00000277198 ZNF705BP0CI00 300 aaPredicted RBP10.41□□□□□ -0.74
C9orf3-201ENST00000277198 PPIAL4FP0DN26 164 aa10.41□□□□□ -0.74
C9orf3-201ENST00000277198 GATA2P23769 480 aaPredicted RBP10.41□□□□□ -0.74
C9orf3-201ENST00000277198 MC5RP33032 325 aa10.41□□□□□ -0.74
C9orf3-201ENST00000277198 UBE2L3P68036 154 aaKnown RBP10.41□□□□□ -0.74
C9orf3-201ENST00000277198 TPTE2P1Q5T6R2 138 aa10.41□□□□□ -0.74
C9orf3-201ENST00000277198 TMEM200BQ69YZ2 307 aa10.41□□□□□ -0.74
C9orf3-201ENST00000277198 TMEM136Q6ZRR5 245 aa10.41□□□□□ -0.74
C9orf3-201ENST00000277198 STXBP6Q8NFX7 210 aa10.41□□□□□ -0.74
C9orf3-201ENST00000277198 OR10W1Q8NGF6 305 aa10.41□□□□□ -0.74
C9orf3-201ENST00000277198 WIPF2Q8TF74 440 aaPredicted RBP10.41□□□□□ -0.74
C9orf3-201ENST00000277198 SMIM12Q96EX1 92 aa10.41□□□□□ -0.74
C9orf3-201ENST00000277198 SLC25A2Q9BXI2 301 aa10.41□□□□□ -0.74
C9orf3-201ENST00000277198 ZNF430Q9H8G1 570 aaPredicted RBP10.41□□□□□ -0.74
C9orf3-201ENST00000277198 NAT8BQ9UHF3 227 aa10.41□□□□□ -0.74
C9orf3-201ENST00000277198 WASHC3Q9Y3C0 194 aa10.41□□□□□ -0.74
C9orf3-201ENST00000277198 PPIAL4AQ9Y536 164 aa10.41□□□□□ -0.74
C9orf3-201ENST00000277198 TCRBV4S1A1TA0A5B7 111 aa10.41□□□□□ -0.74
C9orf3-201ENST00000277198 TNFRSF13BO14836 293 aaPredicted RBP10.41□□□□□ -0.74
C9orf3-201ENST00000277198 SNRPCP09234 159 aaKnown RBP10.41□□□□□ -0.74
C9orf3-201ENST00000277198 NUTF2P61970 127 aaKnown RBP10.41□□□□□ -0.74
C9orf3-201ENST00000277198 CCL8P80075 99 aa10.41□□□□□ -0.74
C9orf3-201ENST00000277198 ADIPOQQ15848 244 aa10.41□□□□□ -0.74
C9orf3-201ENST00000277198 SIGLECL1Q8N7X8 197 aa10.41□□□□□ -0.74
C9orf3-201ENST00000277198 ST6GALNAC6Q969X2 333 aa10.41□□□□□ -0.74
C9orf3-201ENST00000277198 HSPB9Q9BQS6 159 aa10.41□□□□□ -0.74
C9orf3-201ENST00000277198 SAMD10Q9BYL1 202 aa10.41□□□□□ -0.74
C9orf3-201ENST00000277198 ROS1P08922 2347 aa10.4□□□□□ -0.74
C9orf3-201ENST00000277198 IZUMO1RA6ND01 250 aa10.4□□□□□ -0.74
C9orf3-201ENST00000277198 TMEM178BH3BS89 294 aa10.4□□□□□ -0.74
C9orf3-201ENST00000277198 COX7A2P2O60397 106 aa10.4□□□□□ -0.74
C9orf3-201ENST00000277198 GPX1P07203 203 aa10.4□□□□□ -0.74
C9orf3-201ENST00000277198 RAB4AP20338 218 aa10.4□□□□□ -0.74
C9orf3-201ENST00000277198 LGALS7P47929 136 aa10.4□□□□□ -0.74
C9orf3-201ENST00000277198 MLANAQ16655 118 aa10.4□□□□□ -0.74
C9orf3-201ENST00000277198 TMEM183BQ1AE95 376 aa10.4□□□□□ -0.74
C9orf3-201ENST00000277198 LRRC10Q5BKY1 277 aa10.4□□□□□ -0.74
C9orf3-201ENST00000277198 C10orf113Q5VZT2 155 aa10.4□□□□□ -0.74
C9orf3-201ENST00000277198 ETFRF1Q6IPR1 90 aa10.4□□□□□ -0.74
C9orf3-201ENST00000277198 OR10X1Q8NGY0 326 aa10.4□□□□□ -0.74
C9orf3-201ENST00000277198 RNASE7Q9H1E1 156 aaKnown RBP10.4□□□□□ -0.74
C9orf3-201ENST00000277198 AMMECR1Q9Y4X0 333 aaPredicted RBP10.4□□□□□ -0.74
C9orf3-201ENST00000277198 TANC2Q9HCD6 1990 aa10.4□□□□□ -0.74
C9orf3-201ENST00000277198 HIVEP1P15822 2718 aa10.39□□□□□ -0.75
C9orf3-201ENST00000277198 NDUFB3O43676 98 aa10.39□□□□□ -0.75
C9orf3-201ENST00000277198 VMA21Q3ZAQ7 101 aa10.39□□□□□ -0.75
C9orf3-201ENST00000277198 PVRIGQ6DKI7 326 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms