RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 RNASEH2CQ8TDP1 164 aaKnown RBP10.68□□□□□ -0.7
HMGN3-201ENST00000275036 DTD1Q8TEA8 209 aa10.68□□□□□ -0.7
HMGN3-201ENST00000275036 OVOL2Q9BRP0 275 aa10.68□□□□□ -0.7
HMGN3-201ENST00000275036 RPS10-NUDT3A0A1W2PQS6 291 aa10.67□□□□□ -0.7
HMGN3-201ENST00000275036 DFFBO76075 338 aa10.67□□□□□ -0.7
HMGN3-201ENST00000275036 SFT2D2O95562 160 aa10.67□□□□□ -0.7
HMGN3-201ENST00000275036 VAMP1P23763 118 aa10.67□□□□□ -0.7
HMGN3-201ENST00000275036 LRTM2Q8N967 370 aa10.67□□□□□ -0.7
HMGN3-201ENST00000275036 KRTAP3-3Q9BYR6 98 aa10.67□□□□□ -0.7
HMGN3-201ENST00000275036 KRTAP3-2Q9BYR7 98 aa10.67□□□□□ -0.7
HMGN3-201ENST00000275036 DUXBA0A1W2PPF3 345 aa10.66□□□□□ -0.7
HMGN3-201ENST00000275036 IFNA10P01566 189 aa10.66□□□□□ -0.7
HMGN3-201ENST00000275036 SLC25A4P12235 298 aa10.66□□□□□ -0.7
HMGN3-201ENST00000275036 CRYBB3P26998 211 aa10.66□□□□□ -0.7
HMGN3-201ENST00000275036 OR10J1P30954 320 aa10.66□□□□□ -0.7
HMGN3-201ENST00000275036 RBMS2Q15434 407 aaKnown RBP10.66□□□□□ -0.7
HMGN3-201ENST00000275036 CENPSQ8N2Z9 138 aa10.66□□□□□ -0.7
HMGN3-201ENST00000275036 OR1S2Q8NGQ3 325 aa10.66□□□□□ -0.7
HMGN3-201ENST00000275036 OR1S1Q8NH92 325 aa10.66□□□□□ -0.7
HMGN3-201ENST00000275036 NPIPB3Q92617 1050 aa10.66□□□□□ -0.7
HMGN3-201ENST00000275036 MS4A6AQ9H2W1 248 aa10.66□□□□□ -0.7
HMGN3-201ENST00000275036 MAP6D1Q9H9H5 199 aa10.66□□□□□ -0.7
HMGN3-201ENST00000275036 CACFD1Q9UGQ2 172 aa10.66□□□□□ -0.7
HMGN3-201ENST00000275036 U3KQ87 197 aa10.66□□□□□ -0.7
HMGN3-201ENST00000275036 TRAV30A0A087WSZ9 112 aa10.65□□□□□ -0.7
HMGN3-201ENST00000275036 RPL35AP18077 110 aaKnown RBP10.65□□□□□ -0.7
HMGN3-201ENST00000275036 NPPCP23582 126 aa10.65□□□□□ -0.7
HMGN3-201ENST00000275036 BTCP35070 178 aa10.65□□□□□ -0.7
HMGN3-201ENST00000275036 WFDC3Q8IUB2 231 aa10.65□□□□□ -0.7
HMGN3-201ENST00000275036 FAM24BQ8N5W8 94 aa10.65□□□□□ -0.7
HMGN3-201ENST00000275036 ACY3Q96HD9 319 aa10.65□□□□□ -0.7
HMGN3-201ENST00000275036 FLVCR2Q9UPI3 526 aa10.65□□□□□ -0.7
HMGN3-201ENST00000275036 LINC00854A0A1B0GVQ3 168 aa10.64□□□□□ -0.71
HMGN3-201ENST00000275036 NDUFB6O95139 128 aa10.64□□□□□ -0.71
HMGN3-201ENST00000275036 BMI1P35226 326 aa10.64□□□□□ -0.71
HMGN3-201ENST00000275036 YPEL3P61236 119 aaPredicted RBP10.64□□□□□ -0.71
HMGN3-201ENST00000275036 EWSR1Q01844 656 aaKnown RBP eCLIP10.64□□□□□ -0.71
HMGN3-201ENST00000275036 DEFB135Q30KP9 77 aa10.64□□□□□ -0.71
HMGN3-201ENST00000275036 TRIQKQ629K1 86 aa10.64□□□□□ -0.71
HMGN3-201ENST00000275036 ETFRF1Q6IPR1 90 aa10.64□□□□□ -0.71
HMGN3-201ENST00000275036 METTL26Q96S19 204 aa10.64□□□□□ -0.71
HMGN3-201ENST00000275036 U3KQE9 123 aa10.64□□□□□ -0.71
HMGN3-201ENST00000275036 BIRC6Q9NR09 4857 aa10.63□□□□□ -0.71
HMGN3-201ENST00000275036 C9orf170A2RU37 121 aa10.63□□□□□ -0.71
HMGN3-201ENST00000275036 NAP1L6A6NFF2 107 aa10.63□□□□□ -0.71
HMGN3-201ENST00000275036 SCGB2A1O75556 95 aa10.63□□□□□ -0.71
HMGN3-201ENST00000275036 CD5P06127 495 aa10.63□□□□□ -0.71
HMGN3-201ENST00000275036 HOXB5P09067 269 aa10.63□□□□□ -0.71
HMGN3-201ENST00000275036 IAPPP10997 89 aa10.63□□□□□ -0.71
HMGN3-201ENST00000275036 SLC25A6P12236 298 aa10.63□□□□□ -0.71
HMGN3-201ENST00000275036 P2RY1P47900 373 aa10.63□□□□□ -0.71
HMGN3-201ENST00000275036 APOC4P55056 127 aa10.63□□□□□ -0.71
HMGN3-201ENST00000275036 USF2Q15853 346 aaPredicted RBP10.63□□□□□ -0.71
HMGN3-201ENST00000275036 GGNBP1Q5YKI7 109 aa10.63□□□□□ -0.71
HMGN3-201ENST00000275036 NOXA1Q86UR1 476 aa10.63□□□□□ -0.71
HMGN3-201ENST00000275036 TMED3Q9Y3Q3 217 aa10.63□□□□□ -0.71
HMGN3-201ENST00000275036 IGKV1D-37A0A075B6S9 117 aa10.62□□□□□ -0.71
HMGN3-201ENST00000275036 PIGBOS1A0A0B4J2F0 54 aa10.62□□□□□ -0.71
HMGN3-201ENST00000275036 KIR2DL5BA0A0G2JN68 375 aa10.62□□□□□ -0.71
HMGN3-201ENST00000275036 KIR2DL5BA0A0G2JPC4 375 aa10.62□□□□□ -0.71
HMGN3-201ENST00000275036 A0A1W2PS18 150 aa10.62□□□□□ -0.71
HMGN3-201ENST00000275036 DNASE2O00115 360 aaPredicted RBP10.62□□□□□ -0.71
HMGN3-201ENST00000275036 IFNA4P05014 189 aa10.62□□□□□ -0.71
HMGN3-201ENST00000275036 IL7P13232 177 aa10.62□□□□□ -0.71
HMGN3-201ENST00000275036 INPP1P49441 399 aa10.62□□□□□ -0.71
HMGN3-201ENST00000275036 UBE2MP61081 183 aaKnown RBP10.62□□□□□ -0.71
HMGN3-201ENST00000275036 RPL11P62913 178 aaKnown RBP10.62□□□□□ -0.71
HMGN3-201ENST00000275036 PAFAH1B2P68402 229 aa10.62□□□□□ -0.71
HMGN3-201ENST00000275036 GAMTQ14353 236 aa10.62□□□□□ -0.71
HMGN3-201ENST00000275036 Q6ZWC4 215 aa10.62□□□□□ -0.71
HMGN3-201ENST00000275036 KIR2DL5AQ8N109 375 aa10.62□□□□□ -0.71
HMGN3-201ENST00000275036 KIR2DL5BQ8NHK3 375 aa10.62□□□□□ -0.71
HMGN3-201ENST00000275036 Q8WTZ3 238 aa10.62□□□□□ -0.71
HMGN3-201ENST00000275036 MAGT1Q9H0U3 335 aa10.62□□□□□ -0.71
HMGN3-201ENST00000275036 TMEM231Q9H6L2 316 aa10.62□□□□□ -0.71
HMGN3-201ENST00000275036 TRAV2A0A0B4J234 112 aa10.61□□□□□ -0.71
HMGN3-201ENST00000275036 MPTX1A8MV57 137 aa10.61□□□□□ -0.71
HMGN3-201ENST00000275036 FAM90A26D6RGX4 464 aa10.61□□□□□ -0.71
HMGN3-201ENST00000275036 K7EQG2 157 aa10.61□□□□□ -0.71
HMGN3-201ENST00000275036 UBE2CO00762 179 aa10.61□□□□□ -0.71
HMGN3-201ENST00000275036 SPRY2O43597 315 aa10.61□□□□□ -0.71
HMGN3-201ENST00000275036 ADAP1O75689 374 aa10.61□□□□□ -0.71
HMGN3-201ENST00000275036 TOMM40O96008 361 aa10.61□□□□□ -0.71
HMGN3-201ENST00000275036 IL4P05112 153 aa10.61□□□□□ -0.71
HMGN3-201ENST00000275036 HNRNPCP07910 306 aaKnown RBP eCLIP10.61□□□□□ -0.71
HMGN3-201ENST00000275036 PSG1P11464 419 aa10.61□□□□□ -0.71
HMGN3-201ENST00000275036 CMC4P56277 68 aaPredicted RBP10.61□□□□□ -0.71
HMGN3-201ENST00000275036 DEFB131AP59861 70 aa10.61□□□□□ -0.71
HMGN3-201ENST00000275036 LEMD1Q68G75 181 aa10.61□□□□□ -0.71
HMGN3-201ENST00000275036 C16orf54Q6UWD8 224 aa10.61□□□□□ -0.71
HMGN3-201ENST00000275036 STPG3Q8N7X2 389 aa10.61□□□□□ -0.71
HMGN3-201ENST00000275036 STXBP6Q8NFX7 210 aa10.61□□□□□ -0.71
HMGN3-201ENST00000275036 DCANP1Q8TF63 244 aa10.61□□□□□ -0.71
HMGN3-201ENST00000275036 GLMPQ8WWB7 406 aa10.61□□□□□ -0.71
HMGN3-201ENST00000275036 RNF183Q96D59 192 aa10.61□□□□□ -0.71
HMGN3-201ENST00000275036 NDUFA13Q9P0J0 144 aa10.61□□□□□ -0.71
HMGN3-201ENST00000275036 RABAC1Q9UI14 185 aa10.61□□□□□ -0.71
HMGN3-201ENST00000275036 TP53TG1Q9Y2A0 90 aa10.61□□□□□ -0.71
HMGN3-201ENST00000275036 PLA2G10O15496 165 aa10.6□□□□□ -0.71
HMGN3-201ENST00000275036 OR4E1P0C645 316 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms