RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 THAP8Q8NA92 274 aa13.25□□□□□ -0.29
SKP2-201ENST00000274254 NPVFQ9HCQ7 196 aa13.25□□□□□ -0.29
SKP2-201ENST00000274254 UQCC1Q9NVA1 299 aa13.25□□□□□ -0.29
SKP2-201ENST00000274254 IGKV1D-37A0A075B6S9 117 aa13.24□□□□□ -0.29
SKP2-201ENST00000274254 TRAV30A0A087WSZ9 112 aa13.24□□□□□ -0.29
SKP2-201ENST00000274254 PPP5D1E7EU14 171 aa13.24□□□□□ -0.29
SKP2-201ENST00000274254 BMPR1BO00238 502 aa13.24□□□□□ -0.29
SKP2-201ENST00000274254 IGKV1-17P01599 117 aa13.24□□□□□ -0.29
SKP2-201ENST00000274254 HSPB1P04792 205 aaKnown RBP13.24□□□□□ -0.29
SKP2-201ENST00000274254 AP2S1P53680 142 aaPredicted RBP13.24□□□□□ -0.29
SKP2-201ENST00000274254 AKR1C1Q04828 323 aa13.24□□□□□ -0.29
SKP2-201ENST00000274254 CLINT1Q14677 625 aa13.24□□□□□ -0.29
SKP2-201ENST00000274254 TREML4Q6UXN2 200 aa13.24□□□□□ -0.29
SKP2-201ENST00000274254 CHRDL1Q9BU40 450 aa13.24□□□□□ -0.29
SKP2-201ENST00000274254 FBXL17Q9UF56 701 aa13.24□□□□□ -0.29
SKP2-201ENST00000274254 LSM4Q9Y4Z0 139 aaKnown RBP13.24□□□□□ -0.29
SKP2-201ENST00000274254 IGHV4OR15-8A0A075B7B6 117 aa13.23□□□□□ -0.29
SKP2-201ENST00000274254 A0A087WW49 117 aa13.23□□□□□ -0.29
SKP2-201ENST00000274254 SMCO3A2RU48 225 aa13.23□□□□□ -0.29
SKP2-201ENST00000274254 NUPL2O15504 423 aaKnown RBP13.23□□□□□ -0.29
SKP2-201ENST00000274254 CXCL2P19875 107 aa13.23□□□□□ -0.29
SKP2-201ENST00000274254 OR10J1P30954 320 aa13.23□□□□□ -0.29
SKP2-201ENST00000274254 ARL3P36405 182 aa13.23□□□□□ -0.29
SKP2-201ENST00000274254 FHL3Q13643 280 aa13.23□□□□□ -0.29
SKP2-201ENST00000274254 OR11H1Q8NG94 326 aa13.23□□□□□ -0.29
SKP2-201ENST00000274254 RAX2Q96IS3 184 aa13.23□□□□□ -0.29
SKP2-201ENST00000274254 ATP5SQ99766 215 aa13.23□□□□□ -0.29
SKP2-201ENST00000274254 SMIM3Q9BZL3 60 aa13.23□□□□□ -0.29
SKP2-201ENST00000274254 WFDC1Q9HC57 220 aa13.23□□□□□ -0.29
SKP2-201ENST00000274254 DFFBO76075 338 aa13.23□□□□□ -0.29
SKP2-201ENST00000274254 EIF2B2P49770 351 aaKnown RBP13.23□□□□□ -0.29
SKP2-201ENST00000274254 KCNRGQ8N5I3 272 aa13.23□□□□□ -0.29
SKP2-201ENST00000274254 OR1N2Q8NGR9 330 aa13.23□□□□□ -0.29
SKP2-201ENST00000274254 ZNF414Q96IQ9 312 aa13.23□□□□□ -0.29
SKP2-201ENST00000274254 TRGV9Q99603 122 aa13.23□□□□□ -0.29
SKP2-201ENST00000274254 WDR83OSQ9Y284 106 aa13.23□□□□□ -0.29
SKP2-201ENST00000274254 WNK1Q9H4A3 2382 aa13.22□□□□□ -0.29
SKP2-201ENST00000274254 A0A0D9SG52 128 aa13.22□□□□□ -0.29
SKP2-201ENST00000274254 UBE2L5PA0A1B0GUS4 154 aa13.22□□□□□ -0.29
SKP2-201ENST00000274254 ZFP92A6NM28 416 aa13.22□□□□□ -0.29
SKP2-201ENST00000274254 LINC01619G3V211 115 aa13.22□□□□□ -0.29
SKP2-201ENST00000274254 CCL24O00175 119 aa13.22□□□□□ -0.29
SKP2-201ENST00000274254 GGCTO75223 188 aaKnown RBP13.22□□□□□ -0.29
SKP2-201ENST00000274254 ZNF616Q08AN1 781 aa13.22□□□□□ -0.29
SKP2-201ENST00000274254 TEPPQ6URK8 271 aa13.22□□□□□ -0.29
SKP2-201ENST00000274254 DUX3Q96PT4 197 aa13.22□□□□□ -0.29
SKP2-201ENST00000274254 SCGB2A1O75556 95 aa13.21□□□□□ -0.29
SKP2-201ENST00000274254 YPEL3P61236 119 aaPredicted RBP13.21□□□□□ -0.29
SKP2-201ENST00000274254 LGALSLQ3ZCW2 172 aaPredicted RBP13.21□□□□□ -0.29
SKP2-201ENST00000274254 TIGITQ495A1 244 aa13.21□□□□□ -0.29
SKP2-201ENST00000274254 OR2C1O95371 312 aa13.2□□□□□ -0.3
SKP2-201ENST00000274254 ZP3P21754 424 aa13.2□□□□□ -0.3
SKP2-201ENST00000274254 HOXD3P31249 432 aaPredicted RBP13.2□□□□□ -0.3
SKP2-201ENST00000274254 DPF1Q92782 380 aa13.2□□□□□ -0.3
SKP2-201ENST00000274254 PARD6GQ9BYG4 376 aaPredicted RBP13.2□□□□□ -0.3
SKP2-201ENST00000274254 TAAR5O14804 337 aa13.19□□□□□ -0.3
SKP2-201ENST00000274254 MPDU1O75352 247 aa13.19□□□□□ -0.3
SKP2-201ENST00000274254 MYCNOSP40205 109 aa13.19□□□□□ -0.3
SKP2-201ENST00000274254 ZNF90Q03938 601 aa13.19□□□□□ -0.3
SKP2-201ENST00000274254 RELQ04864 619 aaPredicted RBP13.19□□□□□ -0.3
SKP2-201ENST00000274254 ZNF266Q14584 549 aa13.19□□□□□ -0.3
SKP2-201ENST00000274254 RPEL1Q2QD12 228 aa13.19□□□□□ -0.3
SKP2-201ENST00000274254 BTNL8Q6UX41 500 aa13.19□□□□□ -0.3
SKP2-201ENST00000274254 GPHB5Q86YW7 130 aa13.19□□□□□ -0.3
SKP2-201ENST00000274254 C9orf62Q8N4C0 152 aa13.19□□□□□ -0.3
SKP2-201ENST00000274254 OR4F17Q8NGA8 305 aa13.19□□□□□ -0.3
SKP2-201ENST00000274254 OR4F4Q96R69 305 aa13.19□□□□□ -0.3
SKP2-201ENST00000274254 MGST2Q99735 147 aa13.19□□□□□ -0.3
SKP2-201ENST00000274254 WDR61Q9GZS3 305 aaKnown RBP13.19□□□□□ -0.3
SKP2-201ENST00000274254 IGHV3-35A0A0C4DH35 117 aa13.18□□□□□ -0.3
SKP2-201ENST00000274254 TOMM40O96008 361 aa13.18□□□□□ -0.3
SKP2-201ENST00000274254 FGF7P21781 194 aa13.18□□□□□ -0.3
SKP2-201ENST00000274254 KLF5Q13887 457 aaPredicted RBP13.18□□□□□ -0.3
SKP2-201ENST00000274254 LAMTOR1Q6IAA8 161 aa13.18□□□□□ -0.3
SKP2-201ENST00000274254 ZNF600Q6ZNG1 722 aa13.18□□□□□ -0.3
SKP2-201ENST00000274254 TMUB2Q71RG4 321 aa13.18□□□□□ -0.3
SKP2-201ENST00000274254 ARL6Q9H0F7 186 aa13.18□□□□□ -0.3
SKP2-201ENST00000274254 CYTL1Q9NRR1 136 aa13.18□□□□□ -0.3
SKP2-201ENST00000274254 NDUFA4O00483 81 aa13.18□□□□□ -0.3
SKP2-201ENST00000274254 AGPAT2O15120 278 aa13.18□□□□□ -0.3
SKP2-201ENST00000274254 IFNA5P01569 189 aa13.18□□□□□ -0.3
SKP2-201ENST00000274254 PSG1P11464 419 aa13.18□□□□□ -0.3
SKP2-201ENST00000274254 NKX2-5P52952 324 aaPredicted RBP13.18□□□□□ -0.3
SKP2-201ENST00000274254 SLURP1P55000 103 aa13.18□□□□□ -0.3
SKP2-201ENST00000274254 CYP2G1PQ6ZSU1 146 aa13.18□□□□□ -0.3
SKP2-201ENST00000274254 ARPC5LQ9BPX5 153 aa13.18□□□□□ -0.3
SKP2-201ENST00000274254 GGTLC1Q9BX51 225 aa13.18□□□□□ -0.3
SKP2-201ENST00000274254 FABP1P07148 127 aa13.17□□□□□ -0.3
SKP2-201ENST00000274254 RD3LP0DJH9 198 aa13.17□□□□□ -0.3
SKP2-201ENST00000274254 CAMLGP49069 296 aa13.17□□□□□ -0.3
SKP2-201ENST00000274254 RAB31Q13636 194 aa13.17□□□□□ -0.3
SKP2-201ENST00000274254 RPL7L1Q6DKI1 246 aaKnown RBP13.17□□□□□ -0.3
SKP2-201ENST00000274254 TMEM182Q6ZP80 229 aaPredicted RBP13.17□□□□□ -0.3
SKP2-201ENST00000274254 NPCDR1Q9BY65 106 aa13.17□□□□□ -0.3
SKP2-201ENST00000274254 SLC45A2Q9UMX9 530 aa13.17□□□□□ -0.3
SKP2-201ENST00000274254 PUS1Q9Y606 427 aaKnown RBP eCLIP13.17□□□□□ -0.3
SKP2-201ENST00000274254 KANTRA0A1W2PQU2 76 aa13.16□□□□□ -0.3
SKP2-201ENST00000274254 BOLA2-SMG1P6H3BVE0 249 aa13.16□□□□□ -0.3
SKP2-201ENST00000274254 BCL2L11O43521 198 aa13.16□□□□□ -0.3
SKP2-201ENST00000274254 SELENOTP62341 195 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms