RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 EFNB2P52799 333 aa11.22□□□□□ -0.61
PRDM16-201ENST00000270722 LINC00312Q9Y6C7 94 aa11.22□□□□□ -0.61
PRDM16-201ENST00000270722 CD8AP01732 235 aa11.22□□□□□ -0.61
PRDM16-201ENST00000270722 ZXDCQ2QGD7 858 aaPredicted RBP11.22□□□□□ -0.61
PRDM16-201ENST00000270722 C19orf48Q6RUI8 117 aa11.22□□□□□ -0.61
PRDM16-201ENST00000270722 LIMS2Q7Z4I7 341 aa11.22□□□□□ -0.61
PRDM16-201ENST00000270722 NAV3Q8IVL0 2385 aa11.22□□□□□ -0.61
PRDM16-201ENST00000270722 FBXL15Q9H469 300 aa11.22□□□□□ -0.61
PRDM16-201ENST00000270722 RND3P61587 244 aa11.22□□□□□ -0.61
PRDM16-201ENST00000270722 OXLD1Q5BKU9 147 aa11.22□□□□□ -0.61
PRDM16-201ENST00000270722 SCGB3A1Q96QR1 104 aa11.22□□□□□ -0.61
PRDM16-201ENST00000270722 JPT2Q9H910 190 aa11.22□□□□□ -0.61
PRDM16-201ENST00000270722 NHSL1Q5SYE7 1610 aa11.21□□□□□ -0.61
PRDM16-201ENST00000270722 C9orf118A6NHY6 69 aa11.21□□□□□ -0.61
PRDM16-201ENST00000270722 ARL14EPLP0DKL9 152 aa11.21□□□□□ -0.61
PRDM16-201ENST00000270722 M0R381 172 aa11.21□□□□□ -0.61
PRDM16-201ENST00000270722 FOXS1O43638 330 aa11.21□□□□□ -0.61
PRDM16-201ENST00000270722 SERF1AO75920 110 aa11.21□□□□□ -0.62
PRDM16-201ENST00000270722 UNC119Q13432 240 aa11.21□□□□□ -0.62
PRDM16-201ENST00000270722 A0A1W2PQF6 199 aa11.21□□□□□ -0.62
PRDM16-201ENST00000270722 IGKCP01834 107 aa11.21□□□□□ -0.62
PRDM16-201ENST00000270722 C1QL3Q5VWW1 255 aa11.21□□□□□ -0.62
PRDM16-201ENST00000270722 MBNL3Q9NUK0 354 aaKnown RBP11.21□□□□□ -0.62
PRDM16-201ENST00000270722 DLEC1Q9Y238 1755 aa11.21□□□□□ -0.62
PRDM16-201ENST00000270722 IQCF6A8MYZ5 107 aa11.2□□□□□ -0.62
PRDM16-201ENST00000270722 PYY3Q5JQD4 70 aa11.2□□□□□ -0.62
PRDM16-201ENST00000270722 SLC25A47Q6Q0C1 308 aa11.2□□□□□ -0.62
PRDM16-201ENST00000270722 IZUMO1RA6ND01 250 aa11.2□□□□□ -0.62
PRDM16-201ENST00000270722 ST6GALNAC6Q969X2 333 aa11.2□□□□□ -0.62
PRDM16-201ENST00000270722 LTBP4Q8N2S1 1624 aa11.2□□□□□ -0.62
PRDM16-201ENST00000270722 APOHP02749 345 aaPredicted RBP11.2□□□□□ -0.62
PRDM16-201ENST00000270722 NBEAP1P0C6P0 100 aa11.2□□□□□ -0.62
PRDM16-201ENST00000270722 PSG3Q16557 428 aa11.2□□□□□ -0.62
PRDM16-201ENST00000270722 PVRIGQ6DKI7 326 aa11.2□□□□□ -0.62
PRDM16-201ENST00000270722 FAM166AQ6J272 317 aa11.2□□□□□ -0.62
PRDM16-201ENST00000270722 TMEM252Q8N6L7 170 aa11.2□□□□□ -0.62
PRDM16-201ENST00000270722 KLK15Q9H2R5 256 aa11.2□□□□□ -0.62
PRDM16-201ENST00000270722 BMPERQ8N8U9 685 aa11.2□□□□□ -0.62
PRDM16-201ENST00000270722 MARF1Q9Y4F3 1742 aaKnown RBP11.2□□□□□ -0.62
PRDM16-201ENST00000270722 TOMM40O96008 361 aa11.2□□□□□ -0.62
PRDM16-201ENST00000270722 ORMDL2Q53FV1 153 aa11.2□□□□□ -0.62
PRDM16-201ENST00000270722 NABP2Q9BQ15 211 aa11.2□□□□□ -0.62
PRDM16-201ENST00000270722 COL22A1Q8NFW1 1626 aaPredicted RBP11.2□□□□□ -0.62
PRDM16-201ENST00000270722 TRAV24A0A0B4J272 114 aa11.2□□□□□ -0.62
PRDM16-201ENST00000270722 CRYBB3P26998 211 aa11.2□□□□□ -0.62
PRDM16-201ENST00000270722 LINC00305Q7Z4B0 112 aa11.2□□□□□ -0.62
PRDM16-201ENST00000270722 IGHV2-70P01814 119 aa11.19□□□□□ -0.62
PRDM16-201ENST00000270722 AMN1Q8IY45 258 aa11.19□□□□□ -0.62
PRDM16-201ENST00000270722 RCC1LQ96I51 464 aaKnown RBP11.19□□□□□ -0.62
PRDM16-201ENST00000270722 TANC2Q9HCD6 1990 aa11.19□□□□□ -0.62
PRDM16-201ENST00000270722 UBL5Q9BZL1 73 aa11.19□□□□□ -0.62
PRDM16-201ENST00000270722 ARHGAP21Q5T5U3 1957 aa11.19□□□□□ -0.62
PRDM16-201ENST00000270722 MDKP21741 143 aaPredicted RBP11.19□□□□□ -0.62
PRDM16-201ENST00000270722 E9PLN8 166 aa11.19□□□□□ -0.62
PRDM16-201ENST00000270722 HBDP02042 147 aa11.19□□□□□ -0.62
PRDM16-201ENST00000270722 CXCL5P42830 114 aa11.19□□□□□ -0.62
PRDM16-201ENST00000270722 MIC13Q5XKP0 118 aa11.19□□□□□ -0.62
PRDM16-201ENST00000270722 WDR82Q6UXN9 313 aa11.19□□□□□ -0.62
PRDM16-201ENST00000270722 VKORC1Q9BQB6 163 aa11.19□□□□□ -0.62
PRDM16-201ENST00000270722 NBR2O15453 112 aa11.19□□□□□ -0.62
PRDM16-201ENST00000270722 NDUFA3O95167 84 aa11.19□□□□□ -0.62
PRDM16-201ENST00000270722 MRPS18CQ9Y3D5 142 aaKnown RBP11.19□□□□□ -0.62
PRDM16-201ENST00000270722 OOSP1A8MZH6 123 aa11.18□□□□□ -0.62
PRDM16-201ENST00000270722 ATP5L2Q7Z4Y8 100 aa11.18□□□□□ -0.62
PRDM16-201ENST00000270722 PLXNB1O43157 2135 aa11.18□□□□□ -0.62
PRDM16-201ENST00000270722 TET2Q6N021 2002 aaPredicted RBP11.18□□□□□ -0.62
PRDM16-201ENST00000270722 COX6A1P12074 109 aa11.18□□□□□ -0.62
PRDM16-201ENST00000270722 KIAA1644Q3SXP7 199 aa11.18□□□□□ -0.62
PRDM16-201ENST00000270722 CYP2G1PQ6ZSU1 146 aa11.18□□□□□ -0.62
PRDM16-201ENST00000270722 C3orf56Q8N813 242 aa11.18□□□□□ -0.62
PRDM16-201ENST00000270722 K7EP34 96 aa11.18□□□□□ -0.62
PRDM16-201ENST00000270722 IGKV1D-33P01593 117 aa11.18□□□□□ -0.62
PRDM16-201ENST00000270722 IGKV1-33P01594 117 aa11.18□□□□□ -0.62
PRDM16-201ENST00000270722 BSPH1Q075Z2 132 aa11.18□□□□□ -0.62
PRDM16-201ENST00000270722 AURKAIP1Q9NWT8 199 aaPredicted RBP11.18□□□□□ -0.62
PRDM16-201ENST00000270722 HIVEP2P31629 2446 aa11.18□□□□□ -0.62
PRDM16-201ENST00000270722 MRPS18AQ9NVS2 196 aaKnown RBP11.18□□□□□ -0.62
PRDM16-201ENST00000270722 AGRNO00468 2067 aa11.18□□□□□ -0.62
PRDM16-201ENST00000270722 E9PQ18 207 aa11.18□□□□□ -0.62
PRDM16-201ENST00000270722 PGLYRP1O75594 196 aaPredicted RBP11.18□□□□□ -0.62
PRDM16-201ENST00000270722 WNT2P09544 360 aa11.18□□□□□ -0.62
PRDM16-201ENST00000270722 RPL32P62910 135 aaKnown RBP11.18□□□□□ -0.62
PRDM16-201ENST00000270722 TMEM91Q6ZNR0 172 aa11.18□□□□□ -0.62
PRDM16-201ENST00000270722 IGKV3-20P01619 116 aa11.17□□□□□ -0.62
PRDM16-201ENST00000270722 HLA-DQB1P01920 261 aa11.17□□□□□ -0.62
PRDM16-201ENST00000270722 TBR1Q16650 682 aa11.17□□□□□ -0.62
PRDM16-201ENST00000270722 TRAV13-1A0A0B4J241 112 aa11.17□□□□□ -0.62
PRDM16-201ENST00000270722 C1orf100Q5SVJ3 147 aa11.17□□□□□ -0.62
PRDM16-201ENST00000270722 APCDD1LQ8NCL9 501 aa11.17□□□□□ -0.62
PRDM16-201ENST00000270722 NPIPB3Q92617 1050 aa11.17□□□□□ -0.62
PRDM16-201ENST00000270722 RPUSD1Q9UJJ7 312 aaKnown RBP11.17□□□□□ -0.62
PRDM16-201ENST00000270722 CUL9Q8IWT3 2517 aa11.17□□□□□ -0.62
PRDM16-201ENST00000270722 PLA2G10O15496 165 aa11.17□□□□□ -0.62
PRDM16-201ENST00000270722 PEX7O00628 323 aa11.17□□□□□ -0.62
PRDM16-201ENST00000270722 ADMP35318 185 aa11.17□□□□□ -0.62
PRDM16-201ENST00000270722 TCTEX1D4Q5JR98 221 aa11.17□□□□□ -0.62
PRDM16-201ENST00000270722 MSRB3Q8IXL7 192 aa11.17□□□□□ -0.62
PRDM16-201ENST00000270722 FABP5P3A8MUU1 101 aa11.17□□□□□ -0.62
PRDM16-201ENST00000270722 F2Z2F3 143 aa11.16□□□□□ -0.62
PRDM16-201ENST00000270722 TPRX1Q8N7U7 411 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms