RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 IL4P05112 153 aa9.57□□□□□ -0.88
VPS33A-201ENST00000267199 HTN1P15515 57 aa9.57□□□□□ -0.88
VPS33A-201ENST00000267199 RBPMS2Q6ZRY4 209 aaKnown RBP9.57□□□□□ -0.88
VPS33A-201ENST00000267199 NUDT11Q96G61 164 aa9.57□□□□□ -0.88
VPS33A-201ENST00000267199 PROK2Q9HC23 129 aa9.57□□□□□ -0.88
VPS33A-201ENST00000267199 OBSL1O75147 1896 aa9.57□□□□□ -0.88
VPS33A-201ENST00000267199 SAA2-SAA4A0A096LPE2 208 aa9.56□□□□□ -0.88
VPS33A-201ENST00000267199 KBTBD11-OT1A0A1B0GTJ5 212 aa9.56□□□□□ -0.88
VPS33A-201ENST00000267199 A0A1B0GWB2 263 aa9.56□□□□□ -0.88
VPS33A-201ENST00000267199 SAA2P0DJI9 122 aaPredicted RBP9.56□□□□□ -0.88
VPS33A-201ENST00000267199 MYOD1P15172 320 aa9.56□□□□□ -0.88
VPS33A-201ENST00000267199 PRB3Q04118 309 aaPredicted RBP9.56□□□□□ -0.88
VPS33A-201ENST00000267199 MORN2Q502X0 79 aa9.56□□□□□ -0.88
VPS33A-201ENST00000267199 SPOCK3Q9BQ16 436 aa9.56□□□□□ -0.88
VPS33A-201ENST00000267199 FAM181BA6NEQ2 426 aa9.56□□□□□ -0.88
VPS33A-201ENST00000267199 PSG1P11464 419 aa9.56□□□□□ -0.88
VPS33A-201ENST00000267199 ZNF138P52744 262 aa9.56□□□□□ -0.88
VPS33A-201ENST00000267199 TPTE2P1Q5T6R2 138 aa9.56□□□□□ -0.88
VPS33A-201ENST00000267199 Q6ZWC4 215 aa9.56□□□□□ -0.88
VPS33A-201ENST00000267199 WDR31Q8NA23 367 aa9.56□□□□□ -0.88
VPS33A-201ENST00000267199 OR4A5Q8NH83 315 aa9.56□□□□□ -0.88
VPS33A-201ENST00000267199 ZFHX2Q9C0A1 2572 aaPredicted RBP9.56□□□□□ -0.88
VPS33A-201ENST00000267199 NTF4P34130 210 aa9.56□□□□□ -0.88
VPS33A-201ENST00000267199 ZNF585BQ52M93 769 aa9.56□□□□□ -0.88
VPS33A-201ENST00000267199 SAMD13Q5VXD3 122 aa9.56□□□□□ -0.88
VPS33A-201ENST00000267199 C15orf61A6NNL5 157 aa9.56□□□□□ -0.88
VPS33A-201ENST00000267199 SS18L1O75177 396 aaPredicted RBP9.56□□□□□ -0.88
VPS33A-201ENST00000267199 BMI1P35226 326 aa9.56□□□□□ -0.88
VPS33A-201ENST00000267199 LGALS7P47929 136 aa9.56□□□□□ -0.88
VPS33A-201ENST00000267199 NUDT10Q8NFP7 164 aa9.56□□□□□ -0.88
VPS33A-201ENST00000267199 OR10W1Q8NGF6 305 aa9.56□□□□□ -0.88
VPS33A-201ENST00000267199 OR2K2Q8NGT1 345 aa9.56□□□□□ -0.88
VPS33A-201ENST00000267199 LINC00473A8K010 186 aa9.55□□□□□ -0.88
VPS33A-201ENST00000267199 SAA1P0DJI8 122 aaPredicted RBP9.55□□□□□ -0.88
VPS33A-201ENST00000267199 RELQ04864 619 aaPredicted RBP9.55□□□□□ -0.88
VPS33A-201ENST00000267199 SMAGPQ0VAQ4 97 aa9.55□□□□□ -0.88
VPS33A-201ENST00000267199 NHP2Q9NX24 153 aaKnown RBP9.55□□□□□ -0.88
VPS33A-201ENST00000267199 GOSR1O95249 250 aa9.55□□□□□ -0.88
VPS33A-201ENST00000267199 ANOS1P23352 680 aa9.55□□□□□ -0.88
VPS33A-201ENST00000267199 CACNG7P62955 275 aa9.55□□□□□ -0.88
VPS33A-201ENST00000267199 LINC00479Q96M42 142 aa9.55□□□□□ -0.88
VPS33A-201ENST00000267199 C20orf144Q9BQM9 153 aa9.55□□□□□ -0.88
VPS33A-201ENST00000267199 CLEC7AQ9BXN2 247 aa9.55□□□□□ -0.88
VPS33A-201ENST00000267199 MRPL20Q9BYC9 149 aaKnown RBP9.55□□□□□ -0.88
VPS33A-201ENST00000267199 JKAMPQ9P055 326 aa9.55□□□□□ -0.88
VPS33A-201ENST00000267199 YLPM1P49750 1951 aaKnown RBP9.55□□□□□ -0.88
VPS33A-201ENST00000267199 TRBV20OR9-2A0A075B6H5 130 aa9.55□□□□□ -0.88
VPS33A-201ENST00000267199 A0A1B0GV72 72 aa9.55□□□□□ -0.88
VPS33A-201ENST00000267199 YPEL1O60688 119 aa9.55□□□□□ -0.88
VPS33A-201ENST00000267199 TGFAP01135 160 aa9.55□□□□□ -0.88
VPS33A-201ENST00000267199 ZNF114Q8NC26 417 aa9.55□□□□□ -0.88
VPS33A-201ENST00000267199 YPEL2Q96QA6 119 aa9.55□□□□□ -0.88
VPS33A-201ENST00000267199 Q9H3A6 140 aa9.55□□□□□ -0.88
VPS33A-201ENST00000267199 RNF115Q9Y4L5 304 aa9.55□□□□□ -0.88
VPS33A-201ENST00000267199 LSM4Q9Y4Z0 139 aaKnown RBP9.55□□□□□ -0.88
VPS33A-201ENST00000267199 FAM53AQ6NSI3 398 aaPredicted RBP9.55□□□□□ -0.88
VPS33A-201ENST00000267199 Q6ZS49 121 aa9.55□□□□□ -0.88
VPS33A-201ENST00000267199 KIR3DL3Q8N743 410 aa9.55□□□□□ -0.88
VPS33A-201ENST00000267199 ZNF418Q8TF45 676 aaPredicted RBP9.55□□□□□ -0.88
VPS33A-201ENST00000267199 PRR14LQ5THK1 2151 aa9.54□□□□□ -0.88
VPS33A-201ENST00000267199 LY6G6EA0A0G2JKS1 128 aa9.54□□□□□ -0.88
VPS33A-201ENST00000267199 C15orf62A8K5M9 175 aa9.54□□□□□ -0.88
VPS33A-201ENST00000267199 C10orf55Q5SWW7 151 aa9.54□□□□□ -0.88
VPS33A-201ENST00000267199 Q6P435 159 aa9.54□□□□□ -0.88
VPS33A-201ENST00000267199 Q6ZVH6 145 aa9.54□□□□□ -0.88
VPS33A-201ENST00000267199 FOXC2Q99958 501 aa9.54□□□□□ -0.88
VPS33A-201ENST00000267199 METRNQ9UJH8 293 aa9.54□□□□□ -0.88
VPS33A-201ENST00000267199 U3KQA8 63 aa9.54□□□□□ -0.88
VPS33A-201ENST00000267199 FXYD7P58549 80 aa9.54□□□□□ -0.88
VPS33A-201ENST00000267199 COLCA1Q6ZS62 124 aa9.54□□□□□ -0.88
VPS33A-201ENST00000267199 ZCCHC24Q8N2G6 241 aaKnown RBP9.54□□□□□ -0.88
VPS33A-201ENST00000267199 LYPD6BQ8NI32 183 aa9.54□□□□□ -0.88
VPS33A-201ENST00000267199 OSR1Q8TAX0 266 aaPredicted RBP9.54□□□□□ -0.88
VPS33A-201ENST00000267199 TMEM186Q96B77 213 aa9.54□□□□□ -0.88
VPS33A-201ENST00000267199 FOXI3A8MTJ6 420 aaPredicted RBP9.54□□□□□ -0.88
VPS33A-201ENST00000267199 CCL3L1P16619 93 aa9.54□□□□□ -0.88
VPS33A-201ENST00000267199 EPDR1Q9UM22 224 aa9.54□□□□□ -0.88
VPS33A-201ENST00000267199 ZGRF1Q86YA3 2104 aa9.54□□□□□ -0.88
VPS33A-201ENST00000267199 TMEM238LA0A1B0GVL6 79 aa9.53□□□□□ -0.88
VPS33A-201ENST00000267199 A6NJY4 79 aa9.53□□□□□ -0.88
VPS33A-201ENST00000267199 OR11H12B2RN74 326 aa9.53□□□□□ -0.88
VPS33A-201ENST00000267199 CX3CL1P78423 397 aa9.53□□□□□ -0.88
VPS33A-201ENST00000267199 TMEM78Q5T7P6 136 aa9.53□□□□□ -0.88
VPS33A-201ENST00000267199 OR11H1Q8NG94 326 aa9.53□□□□□ -0.88
VPS33A-201ENST00000267199 OR11H2Q8NH07 326 aa9.53□□□□□ -0.88
VPS33A-201ENST00000267199 C2orf16Q68DN1 1984 aa9.53□□□□□ -0.88
VPS33A-201ENST00000267199 TRBV6-6A0A0A6YYG2 114 aa9.53□□□□□ -0.88
VPS33A-201ENST00000267199 CD59P13987 128 aa9.53□□□□□ -0.88
VPS33A-201ENST00000267199 HIST1H1AQ02539 215 aaPredicted RBP9.53□□□□□ -0.88
VPS33A-201ENST00000267199 PNKDQ8N490 385 aa9.53□□□□□ -0.88
VPS33A-201ENST00000267199 TSKUQ8WUA8 353 aa9.53□□□□□ -0.88
VPS33A-201ENST00000267199 C5orf30Q96GV9 206 aa9.53□□□□□ -0.88
VPS33A-201ENST00000267199 ST20Q9HBF5 79 aa9.53□□□□□ -0.88
VPS33A-201ENST00000267199 A0A1W2PS18 150 aa9.53□□□□□ -0.88
VPS33A-201ENST00000267199 SH2D7A6NKC9 451 aaPredicted RBP9.53□□□□□ -0.88
VPS33A-201ENST00000267199 ATP5IP56385 69 aaPredicted RBP9.53□□□□□ -0.88
VPS33A-201ENST00000267199 TTC9CQ8N5M4 171 aa9.53□□□□□ -0.88
VPS33A-201ENST00000267199 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.53□□□□□ -0.88
VPS33A-201ENST00000267199 IGHV3-49A0A0A0MS15 119 aa9.53□□□□□ -0.88
VPS33A-201ENST00000267199 IGHV1-18A0A0C4DH31 117 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms