RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 MEF2CQ06413 473 aaPredicted RBP10.7□□□□□ -0.7
NUP54-201ENST00000264883 LINC01545Q5VT33 79 aa10.7□□□□□ -0.7
NUP54-201ENST00000264883 BHLHA15Q7RTS1 189 aaPredicted RBP10.7□□□□□ -0.7
NUP54-201ENST00000264883 LRRC29Q8WV35 223 aa10.7□□□□□ -0.7
NUP54-201ENST00000264883 LINC00479Q96M42 142 aa10.7□□□□□ -0.7
NUP54-201ENST00000264883 NABP2Q9BQ15 211 aa10.7□□□□□ -0.7
NUP54-201ENST00000264883 ZFHX2Q9C0A1 2572 aaPredicted RBP10.7□□□□□ -0.7
NUP54-201ENST00000264883 TRGV8A0A0C4DH27 118 aa10.7□□□□□ -0.7
NUP54-201ENST00000264883 CELA3AP09093 270 aa10.7□□□□□ -0.7
NUP54-201ENST00000264883 CD24P25063 80 aa10.7□□□□□ -0.7
NUP54-201ENST00000264883 ERVK-16P61578 105 aa10.7□□□□□ -0.7
NUP54-201ENST00000264883 Q6ZR03 302 aa10.7□□□□□ -0.7
NUP54-201ENST00000264883 RABAC1Q9UI14 185 aa10.7□□□□□ -0.7
NUP54-201ENST00000264883 CNOT1A5YKK6 2376 aaKnown RBP10.7□□□□□ -0.7
NUP54-201ENST00000264883 FREM2Q5SZK8 3169 aa10.7□□□□□ -0.7
NUP54-201ENST00000264883 SPAARA0A1B0GVQ0 90 aa10.69□□□□□ -0.7
NUP54-201ENST00000264883 VWC2LB2RUY7 222 aa10.69□□□□□ -0.7
NUP54-201ENST00000264883 C22orf46C9J442 243 aa10.69□□□□□ -0.7
NUP54-201ENST00000264883 HBBP68871 147 aa10.69□□□□□ -0.7
NUP54-201ENST00000264883 RTL8BQ17RB0 113 aa10.69□□□□□ -0.7
NUP54-201ENST00000264883 COQ2Q96H96 371 aa10.69□□□□□ -0.7
NUP54-201ENST00000264883 DOCK10Q96BY6 2186 aa10.69□□□□□ -0.7
NUP54-201ENST00000264883 GVINP1Q7Z2Y8 2422 aa10.69□□□□□ -0.7
NUP54-201ENST00000264883 FNDC10F2Z333 226 aa10.69□□□□□ -0.7
NUP54-201ENST00000264883 FCGR3BO75015 233 aa10.69□□□□□ -0.7
NUP54-201ENST00000264883 TAS2R45P59539 299 aa10.69□□□□□ -0.7
NUP54-201ENST00000264883 CKS1BP61024 79 aa10.69□□□□□ -0.7
NUP54-201ENST00000264883 CXXC4Q9H2H0 198 aa10.69□□□□□ -0.7
NUP54-201ENST00000264883 TIMM8BQ9Y5J9 83 aaPredicted RBP10.69□□□□□ -0.7
NUP54-201ENST00000264883 MED12LQ86YW9 2145 aa10.68□□□□□ -0.7
NUP54-201ENST00000264883 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.68□□□□□ -0.7
NUP54-201ENST00000264883 GRPP07492 148 aa10.68□□□□□ -0.7
NUP54-201ENST00000264883 DUTP33316 252 aaKnown RBP10.68□□□□□ -0.7
NUP54-201ENST00000264883 AESQ08117 197 aa10.68□□□□□ -0.7
NUP54-201ENST00000264883 CD300EQ496F6 205 aaPredicted RBP10.68□□□□□ -0.7
NUP54-201ENST00000264883 ACP7Q6ZNF0 438 aa10.68□□□□□ -0.7
NUP54-201ENST00000264883 KLF13Q9Y2Y9 288 aaPredicted RBP10.68□□□□□ -0.7
NUP54-201ENST00000264883 GAGE12HA6NDE8 117 aa10.68□□□□□ -0.7
NUP54-201ENST00000264883 FGF6P10767 208 aa10.68□□□□□ -0.7
NUP54-201ENST00000264883 FABP2P12104 132 aa10.68□□□□□ -0.7
NUP54-201ENST00000264883 GPR12P47775 334 aa10.68□□□□□ -0.7
NUP54-201ENST00000264883 VKORC1L1Q8N0U8 176 aa10.68□□□□□ -0.7
NUP54-201ENST00000264883 JPT1Q9UK76 154 aa10.68□□□□□ -0.7
NUP54-201ENST00000264883 ZNF257Q9Y2Q1 563 aa10.68□□□□□ -0.7
NUP54-201ENST00000264883 TSSC4Q9Y5U2 329 aaPredicted RBP10.68□□□□□ -0.7
NUP54-201ENST00000264883 TMEM189A5PLL7 270 aa10.67□□□□□ -0.7
NUP54-201ENST00000264883 AGFG2O95081 481 aa10.67□□□□□ -0.7
NUP54-201ENST00000264883 PLPPR2Q96GM1 343 aa10.67□□□□□ -0.7
NUP54-201ENST00000264883 TCF19Q9Y242 345 aa10.67□□□□□ -0.7
NUP54-201ENST00000264883 TRAV26-1A0A087WT03 109 aa10.67□□□□□ -0.7
NUP54-201ENST00000264883 IGHV3-43A0A0B4J1X8 118 aa10.67□□□□□ -0.7
NUP54-201ENST00000264883 TRAV3A0A0B4J244 114 aa10.67□□□□□ -0.7
NUP54-201ENST00000264883 TM4SF5O14894 197 aa10.67□□□□□ -0.7
NUP54-201ENST00000264883 IGHV3-43DP0DP04 118 aa10.67□□□□□ -0.7
NUP54-201ENST00000264883 CEBPDP49716 269 aaPredicted RBP10.67□□□□□ -0.7
NUP54-201ENST00000264883 ZNF138P52744 262 aa10.67□□□□□ -0.7
NUP54-201ENST00000264883 MZT1Q08AG7 82 aa10.67□□□□□ -0.7
NUP54-201ENST00000264883 FOXF2Q12947 444 aa10.67□□□□□ -0.7
NUP54-201ENST00000264883 GUSBP1Q15486 140 aa10.67□□□□□ -0.7
NUP54-201ENST00000264883 INO80CQ6PI98 192 aaPredicted RBP10.67□□□□□ -0.7
NUP54-201ENST00000264883 FA2HQ7L5A8 372 aa10.67□□□□□ -0.7
NUP54-201ENST00000264883 C12orf49Q9H741 205 aa10.67□□□□□ -0.7
NUP54-201ENST00000264883 OBP2BQ9NPH6 170 aa10.67□□□□□ -0.7
NUP54-201ENST00000264883 AMMECR1Q9Y4X0 333 aaPredicted RBP10.67□□□□□ -0.7
NUP54-201ENST00000264883 TET2Q6N021 2002 aaPredicted RBP10.66□□□□□ -0.7
NUP54-201ENST00000264883 KLRC4-KLRK1H3BQV0 150 aa10.66□□□□□ -0.7
NUP54-201ENST00000264883 ZNF48Q96MX3 618 aaPredicted RBP10.66□□□□□ -0.7
NUP54-201ENST00000264883 PLSCR4Q9NRQ2 329 aa10.66□□□□□ -0.7
NUP54-201ENST00000264883 PTPRBP23467 1997 aa10.66□□□□□ -0.7
NUP54-201ENST00000264883 HCFC1P51610 2035 aa10.66□□□□□ -0.7
NUP54-201ENST00000264883 DEFB108AA8MXU0 73 aa10.66□□□□□ -0.7
NUP54-201ENST00000264883 ZNF207O43670 478 aaKnown RBP10.66□□□□□ -0.7
NUP54-201ENST00000264883 SP1P08047 785 aa10.66□□□□□ -0.7
NUP54-201ENST00000264883 FAM87AP0C7U9 286 aa10.66□□□□□ -0.7
NUP54-201ENST00000264883 CRYBA4P53673 196 aa10.66□□□□□ -0.7
NUP54-201ENST00000264883 ZNF788Q6ZQV5 615 aa10.66□□□□□ -0.7
NUP54-201ENST00000264883 TEX45Q8NA69 505 aa10.66□□□□□ -0.7
NUP54-201ENST00000264883 Q8TCH9 128 aa10.66□□□□□ -0.7
NUP54-201ENST00000264883 ADTRPQ96IZ2 230 aa10.66□□□□□ -0.7
NUP54-201ENST00000264883 TMUB1Q9BVT8 246 aa10.66□□□□□ -0.7
NUP54-201ENST00000264883 A1L4Q6 167 aa10.65□□□□□ -0.7
NUP54-201ENST00000264883 C15orf65H3BRN8 121 aa10.65□□□□□ -0.7
NUP54-201ENST00000264883 C8orf88P0DMB2 117 aa10.65□□□□□ -0.7
NUP54-201ENST00000264883 CCDC144NLQ6NUI1 221 aa10.65□□□□□ -0.7
NUP54-201ENST00000264883 C11orf53Q8IXP5 236 aa10.65□□□□□ -0.7
NUP54-201ENST00000264883 OR13A1Q8NGR1 328 aa10.65□□□□□ -0.7
NUP54-201ENST00000264883 PPP1R35Q8TAP8 253 aa10.65□□□□□ -0.7
NUP54-201ENST00000264883 FAM234AQ9H0X4 552 aa10.65□□□□□ -0.7
NUP54-201ENST00000264883 RAB9BQ9NP90 201 aa10.65□□□□□ -0.7
NUP54-201ENST00000264883 CEP250Q9BV73 2442 aa10.65□□□□□ -0.71
NUP54-201ENST00000264883 MC5RP33032 325 aa10.65□□□□□ -0.71
NUP54-201ENST00000264883 UBE2L3P68036 154 aaKnown RBP10.65□□□□□ -0.71
NUP54-201ENST00000264883 SAMD5Q5TGI4 173 aa10.65□□□□□ -0.71
NUP54-201ENST00000264883 DPF1Q92782 380 aa10.65□□□□□ -0.71
NUP54-201ENST00000264883 NDFIP1Q9BT67 221 aa10.65□□□□□ -0.71
NUP54-201ENST00000264883 C19orf24Q9BVV8 132 aa10.65□□□□□ -0.71
NUP54-201ENST00000264883 HES7Q9BYE0 225 aa10.65□□□□□ -0.71
NUP54-201ENST00000264883 PEX7O00628 323 aa10.64□□□□□ -0.71
NUP54-201ENST00000264883 MEOX1P50221 254 aa10.64□□□□□ -0.71
NUP54-201ENST00000264883 ZNF137PP52743 207 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms