RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 PGPA6NDG6 321 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 IGHV1-46P01743 117 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 CSN3P07498 182 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 ZNF474Q6S9Z5 364 aaPredicted RBP10.06□□□□□ -0.8
CHMP3-201ENST00000263856 DEFB124Q8NES8 71 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 CCL17Q92583 94 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 FLYWCH2Q96CP2 140 aaKnown RBP10.06□□□□□ -0.8
CHMP3-201ENST00000263856 GSX1Q9H4S2 264 aaPredicted RBP10.06□□□□□ -0.8
CHMP3-201ENST00000263856 MRPL36Q9P0J6 103 aaKnown RBP10.06□□□□□ -0.8
CHMP3-201ENST00000263856 DKK4Q9UBT3 224 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 SSUH2Q9Y2M2 353 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 ZNF835Q9Y2P0 537 aa10.06□□□□□ -0.8
CHMP3-201ENST00000263856 A0A1W2PRE2 83 aa10.05□□□□□ -0.8
CHMP3-201ENST00000263856 DLL1O00548 723 aa10.05□□□□□ -0.8
CHMP3-201ENST00000263856 PRRX1P54821 245 aa10.05□□□□□ -0.8
CHMP3-201ENST00000263856 TBR1Q16650 682 aa10.05□□□□□ -0.8
CHMP3-201ENST00000263856 C22orf34Q6ZV56 151 aa10.05□□□□□ -0.8
CHMP3-201ENST00000263856 WFDC8Q8IUA0 241 aa10.05□□□□□ -0.8
CHMP3-201ENST00000263856 SPACA3Q8IXA5 215 aa10.05□□□□□ -0.8
CHMP3-201ENST00000263856 KIR3DL3Q8N743 410 aa10.05□□□□□ -0.8
CHMP3-201ENST00000263856 OR1L8Q8NGR8 309 aa10.05□□□□□ -0.8
CHMP3-201ENST00000263856 PGLYRP4Q96LB8 373 aa10.05□□□□□ -0.8
CHMP3-201ENST00000263856 IGF2BP2-AS1Q96M15 143 aa10.05□□□□□ -0.8
CHMP3-201ENST00000263856 FNDC4Q9H6D8 234 aaPredicted RBP10.05□□□□□ -0.8
CHMP3-201ENST00000263856 TPSG1Q9NRR2 321 aa10.05□□□□□ -0.8
CHMP3-201ENST00000263856 C20orf202A1L168 122 aa10.05□□□□□ -0.8
CHMP3-201ENST00000263856 TNFSF4P23510 183 aa10.05□□□□□ -0.8
CHMP3-201ENST00000263856 GLRXP35754 106 aa10.05□□□□□ -0.8
CHMP3-201ENST00000263856 GDF5OSQ5U4N7 250 aa10.05□□□□□ -0.8
CHMP3-201ENST00000263856 RBM14Q96PK6 669 aaKnown RBP10.05□□□□□ -0.8
CHMP3-201ENST00000263856 NBASA2RRP1 2371 aa10.05□□□□□ -0.8
CHMP3-201ENST00000263856 SMIM27A0A1W2PRY6 76 aa10.04□□□□□ -0.8
CHMP3-201ENST00000263856 GUSBP1Q15486 140 aa10.04□□□□□ -0.8
CHMP3-201ENST00000263856 PDPNQ86YL7 162 aa10.04□□□□□ -0.8
CHMP3-201ENST00000263856 PMCHL2Q9BQD1 86 aa10.04□□□□□ -0.8
CHMP3-201ENST00000263856 TPPP3Q9BW30 176 aa10.04□□□□□ -0.8
CHMP3-201ENST00000263856 RPUSD1Q9UJJ7 312 aaKnown RBP10.04□□□□□ -0.8
CHMP3-201ENST00000263856 CSMD1Q96PZ7 3565 aa10.04□□□□□ -0.8
CHMP3-201ENST00000263856 hADV38S2A0JD32 116 aa10.04□□□□□ -0.8
CHMP3-201ENST00000263856 BPIFB3P59826 476 aa10.04□□□□□ -0.8
CHMP3-201ENST00000263856 C2orf83Q53S99 150 aa10.04□□□□□ -0.8
CHMP3-201ENST00000263856 SEM1Q6ZVN7 128 aa10.04□□□□□ -0.8
CHMP3-201ENST00000263856 KLHDC1Q8N7A1 406 aa10.04□□□□□ -0.8
CHMP3-201ENST00000263856 C19orf67A6NJJ6 358 aa10.04□□□□□ -0.8
CHMP3-201ENST00000263856 CGB3P0DN86 165 aa10.04□□□□□ -0.8
CHMP3-201ENST00000263856 CGB7P0DN87 165 aa10.04□□□□□ -0.8
CHMP3-201ENST00000263856 ZNF138P52744 262 aa10.04□□□□□ -0.8
CHMP3-201ENST00000263856 TCTAP57738 103 aa10.04□□□□□ -0.8
CHMP3-201ENST00000263856 WT1-ASQ06250 92 aa10.04□□□□□ -0.8
CHMP3-201ENST00000263856 FAM167A-AS1Q96KT0 104 aa10.04□□□□□ -0.8
CHMP3-201ENST00000263856 EBLN2Q6P2I7 272 aa10.03□□□□□ -0.8
CHMP3-201ENST00000263856 SLC25A48Q6ZT89 311 aaKnown RBP10.03□□□□□ -0.8
CHMP3-201ENST00000263856 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.03□□□□□ -0.8
CHMP3-201ENST00000263856 ZNF430Q9H8G1 570 aaPredicted RBP10.03□□□□□ -0.8
CHMP3-201ENST00000263856 PTPRZ1P23471 2315 aaPredicted RBP10.03□□□□□ -0.8
CHMP3-201ENST00000263856 FAM181BA6NEQ2 426 aa10.03□□□□□ -0.8
CHMP3-201ENST00000263856 ZNF329Q86UD4 541 aa10.03□□□□□ -0.8
CHMP3-201ENST00000263856 ZFP30Q9Y2G7 519 aa10.03□□□□□ -0.8
CHMP3-201ENST00000263856 ZNF257Q9Y2Q1 563 aa10.03□□□□□ -0.8
CHMP3-201ENST00000263856 TRAV8-1A0A0A6YYK1 113 aa10.02□□□□□ -0.8
CHMP3-201ENST00000263856 NKX6-3A6NJ46 265 aa10.02□□□□□ -0.8
CHMP3-201ENST00000263856 LHBP01229 141 aa10.02□□□□□ -0.8
CHMP3-201ENST00000263856 CTRLP40313 264 aa10.02□□□□□ -0.8
CHMP3-201ENST00000263856 RUSC1-AS1Q66K80 236 aa10.02□□□□□ -0.8
CHMP3-201ENST00000263856 PATE2Q6UY27 113 aa10.02□□□□□ -0.8
CHMP3-201ENST00000263856 DAZAP1Q96EP5 407 aaKnown RBP10.02□□□□□ -0.8
CHMP3-201ENST00000263856 APC2O95996 2303 aa10.02□□□□□ -0.81
CHMP3-201ENST00000263856 ABCA4P78363 2273 aa10.02□□□□□ -0.81
CHMP3-201ENST00000263856 PCP4P48539 62 aa10.02□□□□□ -0.81
CHMP3-201ENST00000263856 TNFRSF19Q9NS68 423 aa10.02□□□□□ -0.81
CHMP3-201ENST00000263856 MED13LQ71F56 2210 aa10.02□□□□□ -0.81
CHMP3-201ENST00000263856 A0A1W2PRD5 423 aa10.02□□□□□ -0.81
CHMP3-201ENST00000263856 A0A1W2PRF3 423 aa10.02□□□□□ -0.81
CHMP3-201ENST00000263856 A0A1W2PRM7 423 aa10.02□□□□□ -0.81
CHMP3-201ENST00000263856 NDUFB8O95169 186 aa10.02□□□□□ -0.81
CHMP3-201ENST00000263856 HIST1H1EP10412 219 aaKnown RBP10.02□□□□□ -0.81
CHMP3-201ENST00000263856 TSPOP30536 169 aa10.02□□□□□ -0.81
CHMP3-201ENST00000263856 RNF151Q2KHN1 245 aa10.02□□□□□ -0.81
CHMP3-201ENST00000263856 CR1LQ2VPA4 569 aa10.02□□□□□ -0.81
CHMP3-201ENST00000263856 COX19Q49B96 90 aa10.02□□□□□ -0.81
CHMP3-201ENST00000263856 TMEM177Q53S58 311 aa10.02□□□□□ -0.81
CHMP3-201ENST00000263856 LINC00173Q6ZV60 143 aa10.02□□□□□ -0.81
CHMP3-201ENST00000263856 OR1L4Q8NGR5 311 aa10.02□□□□□ -0.81
CHMP3-201ENST00000263856 ZNF714Q96N38 554 aa10.02□□□□□ -0.81
CHMP3-201ENST00000263856 MRPL32Q9BYC8 188 aaKnown RBP10.02□□□□□ -0.81
CHMP3-201ENST00000263856 hDV102S1A0JD36 115 aa10.01□□□□□ -0.81
CHMP3-201ENST00000263856 H0YJW9 148 aa10.01□□□□□ -0.81
CHMP3-201ENST00000263856 FAM87AP0C7U9 286 aa10.01□□□□□ -0.81
CHMP3-201ENST00000263856 IGLL1P15814 213 aa10.01□□□□□ -0.81
CHMP3-201ENST00000263856 TIMM23BQ5SRD1 257 aa10.01□□□□□ -0.81
CHMP3-201ENST00000263856 ZNF841Q6ZN19 808 aa10.01□□□□□ -0.81
CHMP3-201ENST00000263856 ZNF788Q6ZQV5 615 aa10.01□□□□□ -0.81
CHMP3-201ENST00000263856 GRAMD2BQ96HH9 432 aa10.01□□□□□ -0.81
CHMP3-201ENST00000263856 RITA1Q96K30 269 aa10.01□□□□□ -0.81
CHMP3-201ENST00000263856 PRO3102Q9H379 93 aa10.01□□□□□ -0.81
CHMP3-201ENST00000263856 BET1LQ9NYM9 111 aa10.01□□□□□ -0.81
CHMP3-201ENST00000263856 BTF3P20290 206 aaKnown RBP10.01□□□□□ -0.81
CHMP3-201ENST00000263856 GAL3ST2Q9H3Q3 398 aa10.01□□□□□ -0.81
CHMP3-201ENST00000263856 NDUFA4L2Q9NRX3 87 aa10.01□□□□□ -0.81
CHMP3-201ENST00000263856 LYZP61626 148 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms