RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 IGFL4Q6B9Z1 124 aa10.02□□□□□ -0.81
SMG6-201ENST00000263073 TMEM144Q7Z5S9 345 aa10.02□□□□□ -0.81
SMG6-201ENST00000263073 LINC01587Q99440 93 aa10.02□□□□□ -0.81
SMG6-201ENST00000263073 PSG8Q9UQ74 426 aa10.02□□□□□ -0.81
SMG6-201ENST00000263073 GUSBP1Q15486 140 aa10.01□□□□□ -0.81
SMG6-201ENST00000263073 COPS9Q8WXC6 57 aa10.01□□□□□ -0.81
SMG6-201ENST00000263073 FGF11Q92914 225 aa10.01□□□□□ -0.81
SMG6-201ENST00000263073 MRPS16Q9Y3D3 137 aaKnown RBP10.01□□□□□ -0.81
SMG6-201ENST00000263073 TRAV9-1A0A075B6T8 112 aa10.01□□□□□ -0.81
SMG6-201ENST00000263073 TREML4Q6UXN2 200 aa10.01□□□□□ -0.81
SMG6-201ENST00000263073 PINLYPA6NC86 204 aa10.01□□□□□ -0.81
SMG6-201ENST00000263073 D6R8Y8 96 aa10.01□□□□□ -0.81
SMG6-201ENST00000263073 CABIN1Q9Y6J0 2220 aa10.01□□□□□ -0.81
SMG6-201ENST00000263073 TRAV21A0A0B4J279 112 aa10.01□□□□□ -0.81
SMG6-201ENST00000263073 C9orf106Q8NAJ2 232 aa10.01□□□□□ -0.81
SMG6-201ENST00000263073 OSTCQ9NRP0 149 aa10.01□□□□□ -0.81
SMG6-201ENST00000263073 ARID2Q68CP9 1835 aa10.01□□□□□ -0.81
SMG6-201ENST00000263073 IFI6P09912 130 aa10.01□□□□□ -0.81
SMG6-201ENST00000263073 CNTFRP26992 372 aa10.01□□□□□ -0.81
SMG6-201ENST00000263073 EFEMP2O95967 443 aa10□□□□□ -0.81
SMG6-201ENST00000263073 GAGE13Q4V321 117 aa10□□□□□ -0.81
SMG6-201ENST00000263073 ACTL10Q5JWF8 245 aa10□□□□□ -0.81
SMG6-201ENST00000263073 DPM3Q9P2X0 92 aa10□□□□□ -0.81
SMG6-201ENST00000263073 SMKR1H3BMG3 65 aa10□□□□□ -0.81
SMG6-201ENST00000263073 TDGF1P13385 188 aa10□□□□□ -0.81
SMG6-201ENST00000263073 GLRXP35754 106 aa10□□□□□ -0.81
SMG6-201ENST00000263073 RPL15P61313 204 aaKnown RBP10□□□□□ -0.81
SMG6-201ENST00000263073 OR4X2Q8NGF9 303 aa10□□□□□ -0.81
SMG6-201ENST00000263073 IFI27L1Q96BM0 104 aa10□□□□□ -0.81
SMG6-201ENST00000263073 A0A0G2JLM5 398 aa10□□□□□ -0.81
SMG6-201ENST00000263073 TCRAP04437 139 aa10□□□□□ -0.81
SMG6-201ENST00000263073 CDKN1AP38936 164 aa10□□□□□ -0.81
SMG6-201ENST00000263073 C1orf194Q5T5A4 169 aa10□□□□□ -0.81
SMG6-201ENST00000263073 CCL19Q99731 98 aa10□□□□□ -0.81
SMG6-201ENST00000263073 ST20Q9HBF5 79 aa10□□□□□ -0.81
SMG6-201ENST00000263073 TCRBV4S1A1TA0A5B7 111 aa10□□□□□ -0.81
SMG6-201ENST00000263073 C9JQL5 133 aa10□□□□□ -0.81
SMG6-201ENST00000263073 RPP25LQ8N5L8 163 aaKnown RBP10□□□□□ -0.81
SMG6-201ENST00000263073 MGST2Q99735 147 aa10□□□□□ -0.81
SMG6-201ENST00000263073 VCX2Q9H322 139 aa10□□□□□ -0.81
SMG6-201ENST00000263073 C3orf79P0CE67 100 aa10□□□□□ -0.81
SMG6-201ENST00000263073 PAPPA-AS1Q5QFB9 102 aa10□□□□□ -0.81
SMG6-201ENST00000263073 ASPHD1Q5U4P2 390 aa10□□□□□ -0.81
SMG6-201ENST00000263073 LINC01551Q86U37 167 aa10□□□□□ -0.81
SMG6-201ENST00000263073 RNF125Q96EQ8 232 aa10□□□□□ -0.81
SMG6-201ENST00000263073 RTTNQ86VV8 2226 aa10□□□□□ -0.81
SMG6-201ENST00000263073 DOCK4Q8N1I0 1966 aa9.99□□□□□ -0.81
SMG6-201ENST00000263073 FABP5P3A8MUU1 101 aa9.99□□□□□ -0.81
SMG6-201ENST00000263073 BCL6BQ8N143 479 aaPredicted RBP9.99□□□□□ -0.81
SMG6-201ENST00000263073 FAM89BQ8N5H3 189 aa9.99□□□□□ -0.81
SMG6-201ENST00000263073 RALGAPA1Q6GYQ0 2036 aa9.99□□□□□ -0.81
SMG6-201ENST00000263073 IQCF6A8MYZ5 107 aa9.99□□□□□ -0.81
SMG6-201ENST00000263073 DUTP33316 252 aaKnown RBP9.99□□□□□ -0.81
SMG6-201ENST00000263073 SRSF1Q07955 248 aaKnown RBP eCLIP9.99□□□□□ -0.81
SMG6-201ENST00000263073 TSKUQ8WUA8 353 aa9.99□□□□□ -0.81
SMG6-201ENST00000263073 COLQQ9Y215 455 aaPredicted RBP9.99□□□□□ -0.81
SMG6-201ENST00000263073 MLNRO43193 412 aa9.99□□□□□ -0.81
SMG6-201ENST00000263073 APOBEC3AP31941 199 aaPredicted RBP9.99□□□□□ -0.81
SMG6-201ENST00000263073 NDUFS8O00217 210 aa9.98□□□□□ -0.81
SMG6-201ENST00000263073 STAG3L3P0CL85 134 aa9.98□□□□□ -0.81
SMG6-201ENST00000263073 GGTLC1Q9BX51 225 aa9.98□□□□□ -0.81
SMG6-201ENST00000263073 RPUSD1Q9UJJ7 312 aaKnown RBP9.98□□□□□ -0.81
SMG6-201ENST00000263073 PMS2P5A8MQ11 134 aa9.98□□□□□ -0.81
SMG6-201ENST00000263073 MPZP25189 248 aa9.98□□□□□ -0.81
SMG6-201ENST00000263073 RAB9AP51151 201 aa9.98□□□□□ -0.81
SMG6-201ENST00000263073 METRNQ9UJH8 293 aa9.98□□□□□ -0.81
SMG6-201ENST00000263073 TRBV24-1A0A075B6N3 115 aa9.98□□□□□ -0.81
SMG6-201ENST00000263073 EFNA2O43921 213 aa9.98□□□□□ -0.81
SMG6-201ENST00000263073 CACNG8Q8WXS5 425 aa9.98□□□□□ -0.81
SMG6-201ENST00000263073 PARP14Q460N5 1801 aa9.98□□□□□ -0.81
SMG6-201ENST00000263073 H3BRM9 83 aa9.98□□□□□ -0.81
SMG6-201ENST00000263073 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.98□□□□□ -0.81
SMG6-201ENST00000263073 VWCEQ96DN2 955 aa9.98□□□□□ -0.81
SMG6-201ENST00000263073 B9A039 149 aa9.98□□□□□ -0.81
SMG6-201ENST00000263073 LILRA1O75019 489 aa9.98□□□□□ -0.81
SMG6-201ENST00000263073 C11orf44Q8N8P7 122 aa9.98□□□□□ -0.81
SMG6-201ENST00000263073 Q8TAT8 98 aa9.98□□□□□ -0.81
SMG6-201ENST00000263073 PATJQ8NI35 1801 aa9.97□□□□□ -0.81
SMG6-201ENST00000263073 TM4SF5O14894 197 aa9.97□□□□□ -0.81
SMG6-201ENST00000263073 TRAV8-1A0A0A6YYK1 113 aa9.97□□□□□ -0.81
SMG6-201ENST00000263073 CD28P10747 220 aa9.97□□□□□ -0.81
SMG6-201ENST00000263073 FLVCR1-AS1Q8TAF5 88 aa9.97□□□□□ -0.81
SMG6-201ENST00000263073 IMMP1LQ96LU5 166 aa9.97□□□□□ -0.81
SMG6-201ENST00000263073 AGMATQ9BSE5 352 aa9.97□□□□□ -0.81
SMG6-201ENST00000263073 PSME4Q14997 1843 aa9.97□□□□□ -0.81
SMG6-201ENST00000263073 TRGV2A0A075B6R0 118 aa9.97□□□□□ -0.81
SMG6-201ENST00000263073 A8MWV9 139 aa9.97□□□□□ -0.81
SMG6-201ENST00000263073 ZNF474Q6S9Z5 364 aaPredicted RBP9.97□□□□□ -0.81
SMG6-201ENST00000263073 NUP35Q8NFH5 326 aa9.97□□□□□ -0.81
SMG6-201ENST00000263073 IGKV1-5P01602 117 aa9.97□□□□□ -0.81
SMG6-201ENST00000263073 COX6B1P14854 86 aa9.97□□□□□ -0.81
SMG6-201ENST00000263073 MLANAQ16655 118 aa9.97□□□□□ -0.81
SMG6-201ENST00000263073 OCIAD2Q56VL3 154 aa9.97□□□□□ -0.81
SMG6-201ENST00000263073 LINC00479Q96M42 142 aa9.97□□□□□ -0.81
SMG6-201ENST00000263073 CCL1P22362 96 aa9.97□□□□□ -0.81
SMG6-201ENST00000263073 IFI27P40305 119 aaPredicted RBP9.97□□□□□ -0.81
SMG6-201ENST00000263073 HSD52Q0P140 79 aa9.97□□□□□ -0.81
SMG6-201ENST00000263073 Q6AWC8 147 aa9.97□□□□□ -0.81
SMG6-201ENST00000263073 LYZL1Q6UWQ5 148 aa9.97□□□□□ -0.81
SMG6-201ENST00000263073 WDR83OSQ9Y284 106 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms