RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 BMPR1BO00238 502 aa13.18□□□□□ -0.3
TM9SF1-201ENST00000261789 PMCHP20382 165 aa13.18□□□□□ -0.3
TM9SF1-201ENST00000261789 COMPP49747 757 aaPredicted RBP13.18□□□□□ -0.3
TM9SF1-201ENST00000261789 TMEM30BQ3MIR4 351 aa13.18□□□□□ -0.3
TM9SF1-201ENST00000261789 TMEM167AQ8TBQ9 72 aa13.18□□□□□ -0.3
TM9SF1-201ENST00000261789 CDC42EP3Q9UKI2 254 aa13.18□□□□□ -0.3
TM9SF1-201ENST00000261789 A0A1W2PPI3 338 aa13.18□□□□□ -0.3
TM9SF1-201ENST00000261789 NDUFB3O43676 98 aa13.18□□□□□ -0.3
TM9SF1-201ENST00000261789 ZNF253O75346 499 aa13.18□□□□□ -0.3
TM9SF1-201ENST00000261789 GPX1P07203 203 aa13.18□□□□□ -0.3
TM9SF1-201ENST00000261789 ORM2P19652 201 aa13.18□□□□□ -0.3
TM9SF1-201ENST00000261789 ATP5IP56385 69 aaPredicted RBP13.18□□□□□ -0.3
TM9SF1-201ENST00000261789 SIGLECL1Q8N7X8 197 aa13.18□□□□□ -0.3
TM9SF1-201ENST00000261789 MRPL32Q9BYC8 188 aaKnown RBP13.18□□□□□ -0.3
TM9SF1-201ENST00000261789 TBL2Q9Y4P3 447 aaKnown RBP13.18□□□□□ -0.3
TM9SF1-201ENST00000261789 TRBV9A0A0B4J1U6 114 aa13.17□□□□□ -0.3
TM9SF1-201ENST00000261789 TCAPO15273 167 aa13.17□□□□□ -0.3
TM9SF1-201ENST00000261789 TEX43Q6ZNM6 134 aa13.17□□□□□ -0.3
TM9SF1-201ENST00000261789 LINC00305Q7Z4B0 112 aa13.17□□□□□ -0.3
TM9SF1-201ENST00000261789 BLNKQ8WV28 456 aa13.17□□□□□ -0.3
TM9SF1-201ENST00000261789 ST6GALNAC6Q969X2 333 aa13.17□□□□□ -0.3
TM9SF1-201ENST00000261789 TCRBV4S1A1TA0A5B7 111 aa13.17□□□□□ -0.3
TM9SF1-201ENST00000261789 CNTFRP26992 372 aa13.17□□□□□ -0.3
TM9SF1-201ENST00000261789 AMTP48728 403 aa13.17□□□□□ -0.3
TM9SF1-201ENST00000261789 SLAQ13239 276 aa13.17□□□□□ -0.3
TM9SF1-201ENST00000261789 ZNF329Q86UD4 541 aa13.17□□□□□ -0.3
TM9SF1-201ENST00000261789 FAM19A2Q8N3H0 131 aa13.17□□□□□ -0.3
TM9SF1-201ENST00000261789 A0A1W2PN81 502 aa13.16□□□□□ -0.3
TM9SF1-201ENST00000261789 A0A1W2PS18 150 aa13.16□□□□□ -0.3
TM9SF1-201ENST00000261789 H3BTX0 84 aa13.16□□□□□ -0.3
TM9SF1-201ENST00000261789 M0R143 59 aa13.16□□□□□ -0.3
TM9SF1-201ENST00000261789 FSTL3O95633 263 aa13.16□□□□□ -0.3
TM9SF1-201ENST00000261789 AMY1AP04745 511 aa13.16□□□□□ -0.3
TM9SF1-201ENST00000261789 LOXP28300 417 aaPredicted RBP13.16□□□□□ -0.3
TM9SF1-201ENST00000261789 BRS3P32247 399 aa13.16□□□□□ -0.3
TM9SF1-201ENST00000261789 MRGPRG-AS1Q2M3A8 158 aa13.16□□□□□ -0.3
TM9SF1-201ENST00000261789 LRRC10Q5BKY1 277 aa13.16□□□□□ -0.3
TM9SF1-201ENST00000261789 WDR73Q6P4I2 378 aa13.16□□□□□ -0.3
TM9SF1-201ENST00000261789 PDPNQ86YL7 162 aa13.16□□□□□ -0.3
TM9SF1-201ENST00000261789 FXYD5Q96DB9 178 aa13.16□□□□□ -0.3
TM9SF1-201ENST00000261789 RPH3ALQ9UNE2 315 aa13.16□□□□□ -0.3
TM9SF1-201ENST00000261789 WASHC3Q9Y3C0 194 aa13.16□□□□□ -0.3
TM9SF1-201ENST00000261789 C22orf46C9J442 243 aa13.16□□□□□ -0.3
TM9SF1-201ENST00000261789 CORTO00230 105 aa13.16□□□□□ -0.3
TM9SF1-201ENST00000261789 ABHD17AQ96GS6 310 aa13.16□□□□□ -0.3
TM9SF1-201ENST00000261789 COL25A1Q9BXS0 654 aaPredicted RBP13.16□□□□□ -0.3
TM9SF1-201ENST00000261789 PEX7O00628 323 aa13.15□□□□□ -0.3
TM9SF1-201ENST00000261789 PRRG2O14669 202 aa13.15□□□□□ -0.3
TM9SF1-201ENST00000261789 RAB4AP20338 218 aa13.15□□□□□ -0.3
TM9SF1-201ENST00000261789 G0S2P27469 103 aa13.15□□□□□ -0.3
TM9SF1-201ENST00000261789 MFAP2P55001 183 aa13.15□□□□□ -0.3
TM9SF1-201ENST00000261789 ZNF841Q6ZN19 808 aa13.15□□□□□ -0.3
TM9SF1-201ENST00000261789 OR1B1Q8NGR6 318 aa13.15□□□□□ -0.3
TM9SF1-201ENST00000261789 VSTM2AQ8TAG5 236 aa13.15□□□□□ -0.3
TM9SF1-201ENST00000261789 TMEM186Q96B77 213 aa13.15□□□□□ -0.3
TM9SF1-201ENST00000261789 GSX1Q9H4S2 264 aaPredicted RBP13.15□□□□□ -0.3
TM9SF1-201ENST00000261789 NRN1Q9NPD7 142 aa13.15□□□□□ -0.3
TM9SF1-201ENST00000261789 ASH1LQ9NR48 2969 aaKnown RBP13.15□□□□□ -0.3
TM9SF1-201ENST00000261789 PTPRZ1P23471 2315 aaPredicted RBP13.15□□□□□ -0.3
TM9SF1-201ENST00000261789 MT-ND6P03923 174 aa13.15□□□□□ -0.3
TM9SF1-201ENST00000261789 ZNF124Q15973 351 aa13.15□□□□□ -0.3
TM9SF1-201ENST00000261789 GDF5OSQ5U4N7 250 aa13.15□□□□□ -0.3
TM9SF1-201ENST00000261789 LEMD1Q68G75 181 aa13.15□□□□□ -0.3
TM9SF1-201ENST00000261789 NUDT10Q8NFP7 164 aa13.15□□□□□ -0.3
TM9SF1-201ENST00000261789 NUDT11Q96G61 164 aa13.15□□□□□ -0.3
TM9SF1-201ENST00000261789 VAMP8Q9BV40 100 aa13.15□□□□□ -0.3
TM9SF1-201ENST00000261789 MALRD1Q5VYJ5 2156 aa13.15□□□□□ -0.31
TM9SF1-201ENST00000261789 TNFRSF13BO14836 293 aaPredicted RBP13.14□□□□□ -0.31
TM9SF1-201ENST00000261789 APCSP02743 223 aa13.14□□□□□ -0.31
TM9SF1-201ENST00000261789 Q8N976 141 aa13.14□□□□□ -0.31
TM9SF1-201ENST00000261789 IZUMO1RA6ND01 250 aa13.14□□□□□ -0.31
TM9SF1-201ENST00000261789 TDGF1P3P51864 188 aa13.14□□□□□ -0.31
TM9SF1-201ENST00000261789 SUB1P53999 127 aaKnown RBP eCLIP13.14□□□□□ -0.31
TM9SF1-201ENST00000261789 RNASE6Q93091 150 aaKnown RBP13.14□□□□□ -0.31
TM9SF1-201ENST00000261789 TMEM68Q96MH6 324 aa13.14□□□□□ -0.31
TM9SF1-201ENST00000261789 SSBP4Q9BWG4 385 aaPredicted RBP13.14□□□□□ -0.31
TM9SF1-201ENST00000261789 SSUH2Q9Y2M2 353 aa13.14□□□□□ -0.31
TM9SF1-201ENST00000261789 INS-IGF2F8WCM5 200 aa13.13□□□□□ -0.31
TM9SF1-201ENST00000261789 LYNX1G3V0Z9 82 aa13.13□□□□□ -0.31
TM9SF1-201ENST00000261789 LYNX1P0DP58 116 aa13.13□□□□□ -0.31
TM9SF1-201ENST00000261789 GPR6P46095 362 aaPredicted RBP13.13□□□□□ -0.31
TM9SF1-201ENST00000261789 DLX6P56179 175 aa13.13□□□□□ -0.31
TM9SF1-201ENST00000261789 RPL19P84098 196 aaKnown RBP13.13□□□□□ -0.31
TM9SF1-201ENST00000261789 TMEM183BQ1AE95 376 aa13.13□□□□□ -0.31
TM9SF1-201ENST00000261789 C11orf42Q8N5U0 333 aa13.13□□□□□ -0.31
TM9SF1-201ENST00000261789 NUP35Q8NFH5 326 aa13.13□□□□□ -0.31
TM9SF1-201ENST00000261789 OR1L4Q8NGR5 311 aa13.13□□□□□ -0.31
TM9SF1-201ENST00000261789 KCNS1Q96KK3 526 aa13.13□□□□□ -0.31
TM9SF1-201ENST00000261789 NEU1Q99519 415 aa13.13□□□□□ -0.31
TM9SF1-201ENST00000261789 ZNF331Q9NQX6 463 aaPredicted RBP13.13□□□□□ -0.31
TM9SF1-201ENST00000261789 TNFRSF19Q9NS68 423 aa13.13□□□□□ -0.31
TM9SF1-201ENST00000261789 CEP295Q9C0D2 2601 aa13.13□□□□□ -0.31
TM9SF1-201ENST00000261789 DIRC3C9JPN6 131 aa13.13□□□□□ -0.31
TM9SF1-201ENST00000261789 HLA-DQA1P01909 254 aa13.13□□□□□ -0.31
TM9SF1-201ENST00000261789 IGHV1-8P0DP01 117 aa13.13□□□□□ -0.31
TM9SF1-201ENST00000261789 NTF3P20783 257 aa13.13□□□□□ -0.31
TM9SF1-201ENST00000261789 BPIFB3P59826 476 aa13.13□□□□□ -0.31
TM9SF1-201ENST00000261789 PRR30Q53SZ7 412 aaPredicted RBP13.13□□□□□ -0.31
TM9SF1-201ENST00000261789 OR10J3Q5JRS4 329 aa13.13□□□□□ -0.31
TM9SF1-201ENST00000261789 RNF2Q99496 336 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms