RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 KIR2DS2P43631 304 aa12.92□□□□□ -0.34
LMNB1-201ENST00000261366 COTL1Q14019 142 aa12.92□□□□□ -0.34
LMNB1-201ENST00000261366 ZNF596Q8TC21 504 aa12.92□□□□□ -0.34
LMNB1-201ENST00000261366 ITLN1Q8WWA0 313 aa12.92□□□□□ -0.34
LMNB1-201ENST00000261366 NPIPB3Q92617 1050 aa12.92□□□□□ -0.34
LMNB1-201ENST00000261366 TMEM70Q9BUB7 260 aa12.92□□□□□ -0.34
LMNB1-201ENST00000261366 GAL3ST2Q9H3Q3 398 aa12.92□□□□□ -0.34
LMNB1-201ENST00000261366 MRPL27Q9P0M9 148 aaKnown RBP12.92□□□□□ -0.34
LMNB1-201ENST00000261366 ADGRG4Q8IZF6 3080 aa12.92□□□□□ -0.34
LMNB1-201ENST00000261366 H0YJW9 148 aa12.91□□□□□ -0.34
LMNB1-201ENST00000261366 PSG1P11464 419 aa12.91□□□□□ -0.34
LMNB1-201ENST00000261366 PRCDQ00LT1 54 aa12.91□□□□□ -0.34
LMNB1-201ENST00000261366 SSX8Q7RTT4 187 aa12.91□□□□□ -0.34
LMNB1-201ENST00000261366 URB1-AS1Q96HZ7 61 aa12.91□□□□□ -0.34
LMNB1-201ENST00000261366 PRNDQ9UKY0 176 aa12.91□□□□□ -0.34
LMNB1-201ENST00000261366 IGHV1-18A0A0C4DH31 117 aa12.91□□□□□ -0.34
LMNB1-201ENST00000261366 MUC21A0A0G2JKD1 596 aa12.91□□□□□ -0.34
LMNB1-201ENST00000261366 MUC21A0A140T8X8 626 aa12.91□□□□□ -0.34
LMNB1-201ENST00000261366 F2RL2O00254 374 aa12.91□□□□□ -0.34
LMNB1-201ENST00000261366 TOMM40O96008 361 aa12.91□□□□□ -0.34
LMNB1-201ENST00000261366 MUC21Q5SSG8 566 aa12.91□□□□□ -0.34
LMNB1-201ENST00000261366 FAM216BQ8N7L0 139 aa12.91□□□□□ -0.34
LMNB1-201ENST00000261366 C9orf106Q8NAJ2 232 aa12.91□□□□□ -0.34
LMNB1-201ENST00000261366 CCL13Q99616 98 aa12.91□□□□□ -0.34
LMNB1-201ENST00000261366 ASCL2Q99929 193 aa12.91□□□□□ -0.34
LMNB1-201ENST00000261366 C21orf140B9A014 251 aa12.91□□□□□ -0.34
LMNB1-201ENST00000261366 MOSP00540 346 aa12.91□□□□□ -0.34
LMNB1-201ENST00000261366 SLC25A5P05141 298 aaKnown RBP12.91□□□□□ -0.34
LMNB1-201ENST00000261366 RNASE2P10153 161 aaKnown RBP12.91□□□□□ -0.34
LMNB1-201ENST00000261366 MUC15Q8N387 334 aa12.91□□□□□ -0.34
LMNB1-201ENST00000261366 IGHV2-70DA0A0C4DH43 119 aa12.9□□□□□ -0.34
LMNB1-201ENST00000261366 UPK2O00526 184 aa12.9□□□□□ -0.34
LMNB1-201ENST00000261366 LINC00322Q6ZN03 302 aaPredicted RBP12.9□□□□□ -0.34
LMNB1-201ENST00000261366 ZNF329Q86UD4 541 aa12.9□□□□□ -0.34
LMNB1-201ENST00000261366 GRAMD2BQ96HH9 432 aa12.9□□□□□ -0.34
LMNB1-201ENST00000261366 COMMD5Q9GZQ3 224 aa12.9□□□□□ -0.34
LMNB1-201ENST00000261366 GVINP1Q7Z2Y8 2422 aa12.9□□□□□ -0.34
LMNB1-201ENST00000261366 CT45A6P0DMU7 189 aa12.9□□□□□ -0.34
LMNB1-201ENST00000261366 CT45A5P0DMU8 189 aa12.9□□□□□ -0.34
LMNB1-201ENST00000261366 CT45A7P0DMV0 189 aa12.9□□□□□ -0.34
LMNB1-201ENST00000261366 KIR2DL2P43627 348 aaPredicted RBP12.9□□□□□ -0.34
LMNB1-201ENST00000261366 CD69Q07108 199 aa12.9□□□□□ -0.34
LMNB1-201ENST00000261366 C10orf113Q5VZT2 155 aa12.9□□□□□ -0.34
LMNB1-201ENST00000261366 POLEQ07864 2286 aa12.89□□□□□ -0.35
LMNB1-201ENST00000261366 KBTBD11-OT1A0A1B0GTJ5 212 aa12.89□□□□□ -0.35
LMNB1-201ENST00000261366 MRPL36Q9P0J6 103 aaKnown RBP12.89□□□□□ -0.35
LMNB1-201ENST00000261366 MGAQ8IWI9 3026 aa12.89□□□□□ -0.35
LMNB1-201ENST00000261366 A0A087X0K7 114 aa12.89□□□□□ -0.35
LMNB1-201ENST00000261366 M0R1B8 84 aa12.89□□□□□ -0.35
LMNB1-201ENST00000261366 ANKRD39Q53RE8 183 aa12.89□□□□□ -0.35
LMNB1-201ENST00000261366 AMMECR1LQ6DCA0 310 aa12.89□□□□□ -0.35
LMNB1-201ENST00000261366 PATE2Q6UY27 113 aa12.89□□□□□ -0.35
LMNB1-201ENST00000261366 RBMXL3Q8N7X1 1067 aaKnown RBP12.89□□□□□ -0.35
LMNB1-201ENST00000261366 MBD6Q96DN6 1003 aa12.89□□□□□ -0.35
LMNB1-201ENST00000261366 HARBI1Q96MB7 349 aa12.89□□□□□ -0.35
LMNB1-201ENST00000261366 PGPA6NDG6 321 aa12.88□□□□□ -0.35
LMNB1-201ENST00000261366 SAPCD1Q5SSQ6 148 aa12.88□□□□□ -0.35
LMNB1-201ENST00000261366 Q71RC1 249 aaPredicted RBP12.88□□□□□ -0.35
LMNB1-201ENST00000261366 FNDC4Q9H6D8 234 aaPredicted RBP12.88□□□□□ -0.35
LMNB1-201ENST00000261366 IGHV1-24A0A0C4DH33 117 aa12.88□□□□□ -0.35
LMNB1-201ENST00000261366 LEPROTL1O95214 131 aa12.88□□□□□ -0.35
LMNB1-201ENST00000261366 RTL8BQ17RB0 113 aa12.88□□□□□ -0.35
LMNB1-201ENST00000261366 LINC00305Q7Z4B0 112 aa12.88□□□□□ -0.35
LMNB1-201ENST00000261366 OR1B1Q8NGR6 318 aa12.88□□□□□ -0.35
LMNB1-201ENST00000261366 ATMQ13315 3056 aa12.88□□□□□ -0.35
LMNB1-201ENST00000261366 FOXE3Q13461 319 aa12.87□□□□□ -0.35
LMNB1-201ENST00000261366 RUSC1-AS1Q66K80 236 aa12.87□□□□□ -0.35
LMNB1-201ENST00000261366 CSMD1Q96PZ7 3565 aa12.87□□□□□ -0.35
LMNB1-201ENST00000261366 TRAV8-1A0A0A6YYK1 113 aa12.87□□□□□ -0.35
LMNB1-201ENST00000261366 HIST1H1EP10412 219 aaKnown RBP12.87□□□□□ -0.35
LMNB1-201ENST00000261366 MRPL20Q9BYC9 149 aaKnown RBP12.87□□□□□ -0.35
LMNB1-201ENST00000261366 CDKN1BP46527 198 aa12.87□□□□□ -0.35
LMNB1-201ENST00000261366 CCL11P51671 97 aa12.87□□□□□ -0.35
LMNB1-201ENST00000261366 CNOT1A5YKK6 2376 aaKnown RBP12.86□□□□□ -0.35
LMNB1-201ENST00000261366 SYS1-DBNDD2H3BUS1 97 aa12.86□□□□□ -0.35
LMNB1-201ENST00000261366 TAX1BP3O14907 124 aa12.86□□□□□ -0.35
LMNB1-201ENST00000261366 SRSF6Q13247 344 aaKnown RBP12.86□□□□□ -0.35
LMNB1-201ENST00000261366 TMEM177Q53S58 311 aa12.86□□□□□ -0.35
LMNB1-201ENST00000261366 HCP5Q6MZN7 132 aa12.86□□□□□ -0.35
LMNB1-201ENST00000261366 HBBP68871 147 aa12.86□□□□□ -0.35
LMNB1-201ENST00000261366 DIAPH2-AS1Q14236 149 aa12.86□□□□□ -0.35
LMNB1-201ENST00000261366 C2orf83Q53S99 150 aa12.86□□□□□ -0.35
LMNB1-201ENST00000261366 FAM120AOSQ5T036 256 aa12.86□□□□□ -0.35
LMNB1-201ENST00000261366 PNKDQ8N490 385 aa12.86□□□□□ -0.35
LMNB1-201ENST00000261366 GTSF1Q8WW33 167 aa12.86□□□□□ -0.35
LMNB1-201ENST00000261366 ZNF835Q9Y2P0 537 aa12.86□□□□□ -0.35
LMNB1-201ENST00000261366 PCNX1Q96RV3 2341 aa12.86□□□□□ -0.35
LMNB1-201ENST00000261366 K7EP13 123 aa12.85□□□□□ -0.35
LMNB1-201ENST00000261366 ERHP84090 104 aaKnown RBP12.85□□□□□ -0.35
LMNB1-201ENST00000261366 SLC25A34Q6PIV7 304 aa12.85□□□□□ -0.35
LMNB1-201ENST00000261366 PDPNQ86YL7 162 aa12.85□□□□□ -0.35
LMNB1-201ENST00000261366 WIPF2Q8TF74 440 aaPredicted RBP12.85□□□□□ -0.35
LMNB1-201ENST00000261366 NAA38Q9BRA0 125 aaKnown RBP12.85□□□□□ -0.35
LMNB1-201ENST00000261366 HSBP1L1C9JCN9 74 aa12.85□□□□□ -0.35
LMNB1-201ENST00000261366 ITGB1BP1O14713 200 aa12.85□□□□□ -0.35
LMNB1-201ENST00000261366 FXYD5Q96DB9 178 aa12.85□□□□□ -0.35
LMNB1-201ENST00000261366 FER1L6-AS2Q96M78 137 aa12.85□□□□□ -0.35
LMNB1-201ENST00000261366 GSX1Q9H4S2 264 aaPredicted RBP12.85□□□□□ -0.35
LMNB1-201ENST00000261366 PSMB11A5LHX3 300 aa12.84□□□□□ -0.35
LMNB1-201ENST00000261366 CGB3P0DN86 165 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms