RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 SERF1AO75920 110 aa11.84□□□□□ -0.51
TRAFD1-201ENST00000257604 IL6RP08887 468 aaPredicted RBP11.84□□□□□ -0.51
TRAFD1-201ENST00000257604 PMCHP20382 165 aa11.84□□□□□ -0.51
TRAFD1-201ENST00000257604 Q6ZWC4 215 aa11.84□□□□□ -0.51
TRAFD1-201ENST00000257604 UHRF2Q96PU4 802 aa11.84□□□□□ -0.51
TRAFD1-201ENST00000257604 TMEM208Q9BTX3 173 aa11.84□□□□□ -0.51
TRAFD1-201ENST00000257604 GGTLC1Q9BX51 225 aa11.84□□□□□ -0.51
TRAFD1-201ENST00000257604 FBXL15Q9H469 300 aa11.84□□□□□ -0.51
TRAFD1-201ENST00000257604 PPP1R14DQ9NXH3 145 aa11.84□□□□□ -0.51
TRAFD1-201ENST00000257604 PRNDQ9UKY0 176 aa11.84□□□□□ -0.51
TRAFD1-201ENST00000257604 SSBP2P81877 361 aaPredicted RBP11.83□□□□□ -0.51
TRAFD1-201ENST00000257604 SFRP2Q96HF1 295 aa11.83□□□□□ -0.51
TRAFD1-201ENST00000257604 RAB1BQ9H0U4 201 aa11.83□□□□□ -0.51
TRAFD1-201ENST00000257604 TMEM14BQ9NUH8 114 aa11.83□□□□□ -0.51
TRAFD1-201ENST00000257604 TIMM9Q9Y5J7 89 aa11.83□□□□□ -0.51
TRAFD1-201ENST00000257604 MDFIC2A0A1B0GVS7 189 aa11.83□□□□□ -0.52
TRAFD1-201ENST00000257604 A0A1W2PPR1 153 aa11.83□□□□□ -0.52
TRAFD1-201ENST00000257604 F6UZH7 168 aa11.83□□□□□ -0.52
TRAFD1-201ENST00000257604 H3BTX0 84 aa11.83□□□□□ -0.52
TRAFD1-201ENST00000257604 MEF2CQ06413 473 aaPredicted RBP11.83□□□□□ -0.52
TRAFD1-201ENST00000257604 NHLRC2Q8NBF2 726 aa11.83□□□□□ -0.52
TRAFD1-201ENST00000257604 BTF3L4Q96K17 158 aa11.83□□□□□ -0.52
TRAFD1-201ENST00000257604 NABP2Q9BQ15 211 aa11.83□□□□□ -0.52
TRAFD1-201ENST00000257604 TMEM133Q9H2Q1 129 aa11.83□□□□□ -0.52
TRAFD1-201ENST00000257604 CNIH1O95406 144 aa11.83□□□□□ -0.52
TRAFD1-201ENST00000257604 RAB31Q13636 194 aa11.83□□□□□ -0.52
TRAFD1-201ENST00000257604 KIR3DL3Q8N743 410 aa11.83□□□□□ -0.52
TRAFD1-201ENST00000257604 OR4C13Q8NGP0 309 aa11.83□□□□□ -0.52
TRAFD1-201ENST00000257604 OCC1Q8TAD7 63 aa11.83□□□□□ -0.52
TRAFD1-201ENST00000257604 IGHV2-26A0A0B4J1V2 119 aa11.82□□□□□ -0.52
TRAFD1-201ENST00000257604 TOX4O94842 621 aa11.82□□□□□ -0.52
TRAFD1-201ENST00000257604 TYMSP04818 313 aa11.82□□□□□ -0.52
TRAFD1-201ENST00000257604 PPOXP50336 477 aa11.82□□□□□ -0.52
TRAFD1-201ENST00000257604 ERHP84090 104 aaKnown RBP11.82□□□□□ -0.52
TRAFD1-201ENST00000257604 MIR17HGQ75NE6 70 aa11.82□□□□□ -0.52
TRAFD1-201ENST00000257604 OR8B3Q8NGG8 313 aa11.82□□□□□ -0.52
TRAFD1-201ENST00000257604 OR8B2Q96RD0 313 aa11.82□□□□□ -0.52
TRAFD1-201ENST00000257604 RPH3ALQ9UNE2 315 aa11.82□□□□□ -0.52
TRAFD1-201ENST00000257604 C22orf46C9J442 243 aa11.82□□□□□ -0.52
TRAFD1-201ENST00000257604 MOSP00540 346 aa11.82□□□□□ -0.52
TRAFD1-201ENST00000257604 OR5G3P0C626 314 aa11.82□□□□□ -0.52
TRAFD1-201ENST00000257604 RAB4AP20338 218 aa11.82□□□□□ -0.52
TRAFD1-201ENST00000257604 LCN2P80188 198 aa11.82□□□□□ -0.52
TRAFD1-201ENST00000257604 TMEM155Q4W5P6 130 aa11.82□□□□□ -0.52
TRAFD1-201ENST00000257604 Q5PR19 223 aa11.82□□□□□ -0.52
TRAFD1-201ENST00000257604 NPIPB3Q92617 1050 aa11.82□□□□□ -0.52
TRAFD1-201ENST00000257604 SGK494Q96LW2 274 aa11.82□□□□□ -0.52
TRAFD1-201ENST00000257604 PARD6GQ9BYG4 376 aaPredicted RBP11.82□□□□□ -0.52
TRAFD1-201ENST00000257604 TP53TG3Q9ULZ0 132 aa11.82□□□□□ -0.52
TRAFD1-201ENST00000257604 IGHV3OR16-10A0A075B7F0 116 aa11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 PSG5Q15238 335 aa11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 S100A7AQ86SG5 101 aa11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 FAM19A2Q8N3H0 131 aa11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 CORO2AQ92828 525 aa11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 WNT10AQ9GZT5 417 aa11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 WASHC3Q9Y3C0 194 aa11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 TRAV5A0A0B4J249 113 aa11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 FCN1O00602 326 aa11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 VENTXO95231 258 aa11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 NTF3P20783 257 aa11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 TIMD4Q96H15 378 aa11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 ZFHX3Q15911 3703 aa11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 SETD2Q9BYW2 2564 aaPredicted RBP11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 IGKV1OR2-108A0A075B7D4 117 aa11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 CA1P00915 261 aaPredicted RBP11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 AREGP15514 252 aa11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 ORM2P19652 201 aa11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 WT1-ASQ06250 92 aa11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 AARDQ4LEZ3 155 aa11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 OR1L8Q8NGR8 309 aa11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 TP73-AS1Q9UF72 201 aa11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 RNF24Q9Y225 148 aa11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 FOXA2Q9Y261 457 aaPredicted RBP11.81□□□□□ -0.52
TRAFD1-201ENST00000257604 TMEM144Q7Z5S9 345 aa11.8□□□□□ -0.52
TRAFD1-201ENST00000257604 KIR2DL5BA0A0G2JN68 375 aa11.8□□□□□ -0.52
TRAFD1-201ENST00000257604 KIR2DL5BA0A0G2JPC4 375 aa11.8□□□□□ -0.52
TRAFD1-201ENST00000257604 C19orf84I3L1E1 186 aa11.8□□□□□ -0.52
TRAFD1-201ENST00000257604 LINC00310P59036 64 aa11.8□□□□□ -0.52
TRAFD1-201ENST00000257604 PRCDQ00LT1 54 aa11.8□□□□□ -0.52
TRAFD1-201ENST00000257604 MMDQ15546 238 aa11.8□□□□□ -0.52
TRAFD1-201ENST00000257604 MRPL54Q6P161 138 aaKnown RBP11.8□□□□□ -0.52
TRAFD1-201ENST00000257604 ZNF833PQ6ZTB9 187 aa11.8□□□□□ -0.52
TRAFD1-201ENST00000257604 KIR2DL5AQ8N109 375 aa11.8□□□□□ -0.52
TRAFD1-201ENST00000257604 SERTAD4Q9NUC0 356 aa11.8□□□□□ -0.52
TRAFD1-201ENST00000257604 NCBP2LA6PVI3 153 aaKnown RBP11.79□□□□□ -0.52
TRAFD1-201ENST00000257604 SNURFLB1AK76 121 aa11.79□□□□□ -0.52
TRAFD1-201ENST00000257604 CRISP2P16562 243 aa11.79□□□□□ -0.52
TRAFD1-201ENST00000257604 EFNB3Q15768 340 aa11.79□□□□□ -0.52
TRAFD1-201ENST00000257604 VMA21Q3ZAQ7 101 aa11.79□□□□□ -0.52
TRAFD1-201ENST00000257604 OR8I2Q8N0Y5 310 aa11.79□□□□□ -0.52
TRAFD1-201ENST00000257604 Q8N7P7 452 aa11.79□□□□□ -0.52
TRAFD1-201ENST00000257604 RAB1CQ92928 201 aa11.79□□□□□ -0.52
TRAFD1-201ENST00000257604 MRPL18Q9H0U6 180 aaKnown RBP11.79□□□□□ -0.52
TRAFD1-201ENST00000257604 USP24Q9UPU5 2620 aa11.79□□□□□ -0.52
TRAFD1-201ENST00000257604 RPLP1P05386 114 aaKnown RBP11.79□□□□□ -0.52
TRAFD1-201ENST00000257604 KLF17Q5JT82 389 aaPredicted RBP11.79□□□□□ -0.52
TRAFD1-201ENST00000257604 OR10G8Q8NGN5 311 aa11.79□□□□□ -0.52
TRAFD1-201ENST00000257604 TMEM186Q96B77 213 aa11.79□□□□□ -0.52
TRAFD1-201ENST00000257604 SONP18583 2426 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms