RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 LEPP41159 167 aa8.55□□□□□ -1.04
TRPM1-201ENST00000256552 RPL39P5Q59GN2 51 aa8.55□□□□□ -1.04
TRPM1-201ENST00000256552 C8orf86Q6ZUL3 223 aa8.55□□□□□ -1.04
TRPM1-201ENST00000256552 CIARTQ8N365 385 aaPredicted RBP8.55□□□□□ -1.04
TRPM1-201ENST00000256552 VGLL1Q99990 258 aa8.55□□□□□ -1.04
TRPM1-201ENST00000256552 VEGFBP49765 207 aa8.55□□□□□ -1.04
TRPM1-201ENST00000256552 GUSBP11Q6P575 273 aa8.55□□□□□ -1.04
TRPM1-201ENST00000256552 NXT2Q9NPJ8 142 aaKnown RBP8.55□□□□□ -1.04
TRPM1-201ENST00000256552 SLC25A10Q9UBX3 287 aaPredicted RBP8.55□□□□□ -1.04
TRPM1-201ENST00000256552 C12orf77C9JDV5 145 aa8.54□□□□□ -1.04
TRPM1-201ENST00000256552 SMAD7O15105 426 aaKnown RBP8.54□□□□□ -1.04
TRPM1-201ENST00000256552 IGKV3-11P04433 115 aa8.54□□□□□ -1.04
TRPM1-201ENST00000256552 YPEL4Q96NS1 127 aa8.54□□□□□ -1.04
TRPM1-201ENST00000256552 MRPL20Q9BYC9 149 aaKnown RBP8.54□□□□□ -1.04
TRPM1-201ENST00000256552 KNTC1P50748 2209 aa8.54□□□□□ -1.04
TRPM1-201ENST00000256552 COX8AP10176 69 aa8.54□□□□□ -1.04
TRPM1-201ENST00000256552 TMEM190Q8WZ59 177 aa8.54□□□□□ -1.04
TRPM1-201ENST00000256552 RP1P56715 2156 aa8.54□□□□□ -1.04
TRPM1-201ENST00000256552 GAGE2AQ6NT46 116 aa8.54□□□□□ -1.04
TRPM1-201ENST00000256552 ATP5L2Q7Z4Y8 100 aa8.54□□□□□ -1.04
TRPM1-201ENST00000256552 CCL17Q92583 94 aa8.54□□□□□ -1.04
TRPM1-201ENST00000256552 EFEMP2O95967 443 aa8.54□□□□□ -1.04
TRPM1-201ENST00000256552 CFPP27918 469 aa8.54□□□□□ -1.04
TRPM1-201ENST00000256552 SPEM2Q0P670 501 aa8.54□□□□□ -1.04
TRPM1-201ENST00000256552 SRSF7Q16629 238 aaKnown RBP eCLIP8.54□□□□□ -1.04
TRPM1-201ENST00000256552 RNF183Q96D59 192 aa8.54□□□□□ -1.04
TRPM1-201ENST00000256552 IFI27L2Q9H2X8 130 aa8.54□□□□□ -1.04
TRPM1-201ENST00000256552 SRSF1Q07955 248 aaKnown RBP eCLIP8.53□□□□□ -1.04
TRPM1-201ENST00000256552 TMEM30BQ3MIR4 351 aa8.53□□□□□ -1.04
TRPM1-201ENST00000256552 SPATA31B1PQ5VZV4 182 aa8.53□□□□□ -1.04
TRPM1-201ENST00000256552 FAM159AQ6UWV7 190 aa8.53□□□□□ -1.04
TRPM1-201ENST00000256552 F5P12259 2224 aa8.53□□□□□ -1.04
TRPM1-201ENST00000256552 ORMDL2Q53FV1 153 aa8.53□□□□□ -1.04
TRPM1-201ENST00000256552 C18orf32Q8TCD1 76 aa8.53□□□□□ -1.04
TRPM1-201ENST00000256552 SCARF2Q96GP6 870 aaPredicted RBP8.53□□□□□ -1.04
TRPM1-201ENST00000256552 LY96Q9Y6Y9 160 aa8.53□□□□□ -1.04
TRPM1-201ENST00000256552 NUPR1O60356 82 aa8.53□□□□□ -1.04
TRPM1-201ENST00000256552 INO80CQ6PI98 192 aaPredicted RBP8.53□□□□□ -1.04
TRPM1-201ENST00000256552 C1orf43Q9BWL3 253 aa8.53□□□□□ -1.04
TRPM1-201ENST00000256552 SRXN1Q9BYN0 137 aa8.53□□□□□ -1.04
TRPM1-201ENST00000256552 JPT1Q9UK76 154 aa8.53□□□□□ -1.04
TRPM1-201ENST00000256552 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.53□□□□□ -1.04
TRPM1-201ENST00000256552 SAA2-SAA4A0A096LPE2 208 aa8.53□□□□□ -1.04
TRPM1-201ENST00000256552 TFF2Q03403 129 aa8.53□□□□□ -1.04
TRPM1-201ENST00000256552 LOXL2Q9Y4K0 774 aa8.53□□□□□ -1.04
TRPM1-201ENST00000256552 LSM4Q9Y4Z0 139 aaKnown RBP8.53□□□□□ -1.04
TRPM1-201ENST00000256552 MAGEA5P43359 124 aa8.52□□□□□ -1.04
TRPM1-201ENST00000256552 IFI27L1Q96BM0 104 aa8.52□□□□□ -1.04
TRPM1-201ENST00000256552 CALYQ9NYX4 217 aa8.52□□□□□ -1.04
TRPM1-201ENST00000256552 LINC01565O15544 149 aa8.52□□□□□ -1.05
TRPM1-201ENST00000256552 CRPP02741 224 aa8.52□□□□□ -1.05
TRPM1-201ENST00000256552 TREML4Q6UXN2 200 aa8.52□□□□□ -1.05
TRPM1-201ENST00000256552 ARPC1AQ92747 370 aa8.52□□□□□ -1.05
TRPM1-201ENST00000256552 IGKV3-7A0A075B6H7 116 aa8.52□□□□□ -1.05
TRPM1-201ENST00000256552 TMEM86BQ8N661 226 aa8.52□□□□□ -1.05
TRPM1-201ENST00000256552 COQ2Q96H96 371 aa8.52□□□□□ -1.05
TRPM1-201ENST00000256552 VKORC1Q9BQB6 163 aa8.52□□□□□ -1.05
TRPM1-201ENST00000256552 TDRD15B5MCY1 1934 aaKnown RBP8.52□□□□□ -1.05
TRPM1-201ENST00000256552 TRBV20-1A0A075B6N2 111 aa8.52□□□□□ -1.05
TRPM1-201ENST00000256552 FOXH1O75593 365 aa8.52□□□□□ -1.05
TRPM1-201ENST00000256552 TMEM14EPQ6UXP3 125 aa8.52□□□□□ -1.05
TRPM1-201ENST00000256552 CHD3Q12873 2000 aaKnown RBP8.52□□□□□ -1.05
TRPM1-201ENST00000256552 IGKV1-12A0A0C4DH73 117 aa8.52□□□□□ -1.05
TRPM1-201ENST00000256552 IGKV1D-12P01611 117 aa8.52□□□□□ -1.05
TRPM1-201ENST00000256552 PYYP10082 97 aa8.52□□□□□ -1.05
TRPM1-201ENST00000256552 IL11RAQ14626 422 aa8.52□□□□□ -1.05
TRPM1-201ENST00000256552 FSCN3Q9NQT6 498 aa8.52□□□□□ -1.05
TRPM1-201ENST00000256552 SIVA1O15304 175 aa8.51□□□□□ -1.05
TRPM1-201ENST00000256552 CELA2AP08217 269 aa8.51□□□□□ -1.05
TRPM1-201ENST00000256552 FHL1Q13642 323 aa8.51□□□□□ -1.05
TRPM1-201ENST00000256552 PDCD11Q14690 1871 aaKnown RBP8.51□□□□□ -1.05
TRPM1-201ENST00000256552 PEAR1Q5VY43 1037 aaPredicted RBP8.51□□□□□ -1.05
TRPM1-201ENST00000256552 NUP35Q8NFH5 326 aa8.51□□□□□ -1.05
TRPM1-201ENST00000256552 PSG8Q9UQ74 426 aa8.51□□□□□ -1.05
TRPM1-201ENST00000256552 TRAV24A0A0B4J272 114 aa8.51□□□□□ -1.05
TRPM1-201ENST00000256552 CEACAM4O75871 244 aa8.51□□□□□ -1.05
TRPM1-201ENST00000256552 SP9P0CG40 484 aa8.51□□□□□ -1.05
TRPM1-201ENST00000256552 EVI2AP22794 236 aa8.51□□□□□ -1.05
TRPM1-201ENST00000256552 IFI27P40305 119 aaPredicted RBP8.51□□□□□ -1.05
TRPM1-201ENST00000256552 ZNF726P1Q15940 193 aa8.51□□□□□ -1.05
TRPM1-201ENST00000256552 ECSCRQ19T08 205 aa8.51□□□□□ -1.05
TRPM1-201ENST00000256552 FAM74A4Q5TZK3 123 aa8.51□□□□□ -1.05
TRPM1-201ENST00000256552 CFHR5Q9BXR6 569 aa8.51□□□□□ -1.05
TRPM1-201ENST00000256552 DOCK4Q8N1I0 1966 aa8.51□□□□□ -1.05
TRPM1-201ENST00000256552 IGKV1-5P01602 117 aa8.51□□□□□ -1.05
TRPM1-201ENST00000256552 TMEM240Q5SV17 173 aa8.51□□□□□ -1.05
TRPM1-201ENST00000256552 PPP1R27Q86WC6 154 aa8.51□□□□□ -1.05
TRPM1-201ENST00000256552 J3KT08 172 aa8.51□□□□□ -1.05
TRPM1-201ENST00000256552 INAFM2P0DMQ5 153 aa8.51□□□□□ -1.05
TRPM1-201ENST00000256552 ZNF138P52744 262 aa8.51□□□□□ -1.05
TRPM1-201ENST00000256552 IGHV3-72A0A0B4J1Y9 119 aa8.5□□□□□ -1.05
TRPM1-201ENST00000256552 A0A0G2JRQ6 117 aa8.5□□□□□ -1.05
TRPM1-201ENST00000256552 CGB1A6NKQ9 187 aa8.5□□□□□ -1.05
TRPM1-201ENST00000256552 PTGDSP41222 190 aa8.5□□□□□ -1.05
TRPM1-201ENST00000256552 GTSCR1Q86UQ5 136 aa8.5□□□□□ -1.05
TRPM1-201ENST00000256552 ZNF837Q96EG3 531 aaPredicted RBP8.5□□□□□ -1.05
TRPM1-201ENST00000256552 Q9H3A6 140 aa8.5□□□□□ -1.05
TRPM1-201ENST00000256552 PLA2G2EQ9NZK7 142 aa8.5□□□□□ -1.05
TRPM1-201ENST00000256552 MPDZO75970 2070 aa8.5□□□□□ -1.05
TRPM1-201ENST00000256552 SLC22A18ASQ8N1D0 253 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms